RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 SRSF5Q13243 272 aaKnown RBP8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 PPP2R5DQ14738 602 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 ZRSR1Q15695 479 aaKnown RBP8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 IL17AQ16552 155 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 WDR44Q5JSH3 913 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 KRT79Q5XKE5 535 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 Q6ZS52 159 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 C1orf186Q6ZWK4 172 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 DPH6Q7L8W6 267 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 TMC8Q8IU68 726 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 MFSD6LQ8IWD5 586 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 LEMD2Q8NC56 503 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 APPL2Q8NEU8 664 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 BEST2Q8NFU1 509 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 FBXO18Q8NFZ0 1043 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 RTKNQ9BST9 563 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 IER2Q9BTL4 223 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 MMTAG2Q9BU76 263 aaKnown RBP8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 LRRC3Q9BY71 257 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 RAB34Q9BZG1 259 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 DNAJC25Q9H1X3 360 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 TRPV5Q9NQA5 729 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 RAB23Q9ULC3 237 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 DNM3Q9UQ16 869 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 MYO16Q9Y6X6 1858 aa8.48□□□□□ -1.05
SMCHD1-210ENST00000583800 CHURC1-FNTBB4DL54 471 aa8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 M0QZQ0 153 aa8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 PPEF2O14830 753 aa8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 TOM1L1O75674 476 aa8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 SOAT2O75908 522 aa8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 VSIG8P0DPA2 414 aa8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 MAPTP10636 758 aaKnown RBP8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 MARCKSP29966 332 aaPredicted RBP8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 LRPAP1P30533 357 aa8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 HOXC13P31276 330 aa8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 TNFSF9P41273 254 aa8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 MATR3P43243 847 aaKnown RBP eCLIP8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 CXCL12P48061 93 aa8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 FNTBP49356 437 aa8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 STRN3Q13033 797 aa8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 DUSP4Q13115 394 aa8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 PDIA5Q14554 519 aa8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 LAIR1Q6GTX8 287 aa8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 TXNDC11Q6PKC3 985 aa8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 YAF2Q8IY57 180 aa8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 TTC9BQ8N6N2 239 aa8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 CELF5Q8N6W0 485 aaKnown RBP8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 FAM184AQ8NB25 1140 aa8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 TMEM161BQ8NDZ6 487 aa8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 TTC8Q8TAM2 541 aa8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 CSGALNACT1Q8TDX6 532 aa8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 ZFYVE19Q96K21 471 aa8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 TMEM209Q96SK2 561 aa8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 PLIN2Q99541 437 aa8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 LLPHQ9BRT6 129 aaKnown RBP8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 HAPLN2Q9GZV7 340 aa8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 C17orf75Q9HAS0 396 aa8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 TRPV4Q9HBA0 871 aa8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 C2orf42Q9NWW7 574 aa8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 LIMCH1Q9UPQ0 1083 aa8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 RBM19Q9Y4C8 960 aaKnown RBP8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 KMT2BQ9UMN6 2715 aaPredicted RBP8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 KIAA1549LQ6ZVL6 1849 aa8.47□□□□□ -1.05
SMCHD1-210ENST00000583800 CNOT1A5YKK6 2376 aaKnown RBP8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 NPHP3-ACAD11A0A0J9YXS1 232 aa8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 MTMR11A4FU01 709 aa8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 SPECC1L-ADORA2AF8WAN1 911 aa8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 K7ESF4 209 aa8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 CHADO15335 359 aa8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 CLDN3O15551 220 aa8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 OAZ2O95190 189 aa8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 RETP07949 1114 aa8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 ADRB1P08588 477 aa8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 PLS3P13797 630 aa8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 GUCY2CP25092 1073 aa8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 AARSP49588 968 aaKnown RBP eCLIP8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 CDR1P51861 262 aa8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 KPNA1P52294 538 aaPredicted RBP8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 HMGN5P82970 282 aaKnown RBP8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 MCL1Q07820 350 aa8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 FCHO2Q0JRZ9 810 aa8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 KCNMA1Q12791 1236 aa8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 PLD1Q13393 1074 aa8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 SIM2Q14190 667 aaPredicted RBP8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 LRRC32Q14392 662 aa8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 HEATR6Q6AI08 1181 aaKnown RBP8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 ZPBP2Q6X784 338 aa8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 DSTYKQ6XUX3 929 aa8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 PRR23CQ6ZRP0 262 aa8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 GAREM2Q75VX8 874 aa8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 ARID3BQ8IVW6 561 aaPredicted RBP8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 SPEM1Q8N4L4 309 aa8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 NETO1Q8TDF5 533 aa8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 LRRC3BQ96PB8 259 aa8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 PNMA5Q96PV4 448 aa8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 NTPCRQ9BSD7 190 aaKnown RBP8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 MKNK1Q9BUB5 465 aa8.46□□□□□ -1.06
SMCHD1-210ENST00000583800 TIPINQ9BVW5 301 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms