RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 C2orf15Q8WU43 125 aaKnown RBP13.3□□□□□ -0.28
TOP3A-215ENST00000583328 GATA6Q92908 595 aa13.3□□□□□ -0.28
TOP3A-215ENST00000583328 CD101Q93033 1021 aa13.3□□□□□ -0.28
TOP3A-215ENST00000583328 ECT2Q9H8V3 914 aa13.3□□□□□ -0.28
TOP3A-215ENST00000583328 ABI2Q9NYB9 513 aaPredicted RBP13.3□□□□□ -0.28
TOP3A-215ENST00000583328 TBX20Q9UMR3 447 aa13.3□□□□□ -0.28
TOP3A-215ENST00000583328 MAGED2Q9UNF1 606 aaPredicted RBP13.3□□□□□ -0.28
TOP3A-215ENST00000583328 H0YCG3 227 aa13.29□□□□□ -0.28
TOP3A-215ENST00000583328 CYB561D2O14569 222 aa13.29□□□□□ -0.28
TOP3A-215ENST00000583328 CDX4O14627 284 aaPredicted RBP13.29□□□□□ -0.28
TOP3A-215ENST00000583328 OGTO15294 1046 aa13.29□□□□□ -0.28
TOP3A-215ENST00000583328 IRX4P78413 519 aa13.29□□□□□ -0.28
TOP3A-215ENST00000583328 PMS2CLQ68D20 193 aa13.29□□□□□ -0.28
TOP3A-215ENST00000583328 KIAA1211LQ6NV74 962 aa13.29□□□□□ -0.28
TOP3A-215ENST00000583328 LRSAM1Q6UWE0 723 aa13.29□□□□□ -0.28
TOP3A-215ENST00000583328 LRRTM3Q86VH5 581 aa13.29□□□□□ -0.28
TOP3A-215ENST00000583328 MON1AQ86VX9 555 aa13.29□□□□□ -0.28
TOP3A-215ENST00000583328 CD302Q8IX05 232 aa13.29□□□□□ -0.28
TOP3A-215ENST00000583328 DCP1BQ8IZD4 617 aaKnown RBP13.29□□□□□ -0.28
TOP3A-215ENST00000583328 DEFB124Q8NES8 71 aa13.29□□□□□ -0.28
TOP3A-215ENST00000583328 CCDC26Q8TAB7 109 aa13.29□□□□□ -0.28
TOP3A-215ENST00000583328 RIN3Q8TB24 985 aa13.29□□□□□ -0.28
TOP3A-215ENST00000583328 ZCCHC14Q8WYQ9 949 aaKnown RBP13.29□□□□□ -0.28
TOP3A-215ENST00000583328 TPSD1Q9BZJ3 242 aa13.29□□□□□ -0.28
TOP3A-215ENST00000583328 DUS2Q9NX74 493 aaKnown RBP13.29□□□□□ -0.28
TOP3A-215ENST00000583328 LARSQ9P2J5 1176 aaKnown RBP13.29□□□□□ -0.28
TOP3A-215ENST00000583328 CITO14578 2027 aa13.29□□□□□ -0.28
TOP3A-215ENST00000583328 ATG2BQ96BY7 2078 aa13.28□□□□□ -0.28
TOP3A-215ENST00000583328 SOBPA7XYQ1 873 aa13.28□□□□□ -0.28
TOP3A-215ENST00000583328 PATE3B3GLJ2 98 aa13.28□□□□□ -0.28
TOP3A-215ENST00000583328 PIRO00625 290 aa13.28□□□□□ -0.28
TOP3A-215ENST00000583328 ADRB2P07550 413 aa13.28□□□□□ -0.28
TOP3A-215ENST00000583328 CSH1P0DML2 217 aa13.28□□□□□ -0.28
TOP3A-215ENST00000583328 CSH2P0DML3 217 aa13.28□□□□□ -0.28
TOP3A-215ENST00000583328 HMGA1P17096 107 aaKnown RBP13.28□□□□□ -0.28
TOP3A-215ENST00000583328 IFNAR2P48551 515 aa13.28□□□□□ -0.28
TOP3A-215ENST00000583328 DHPSP49366 369 aaPredicted RBP13.28□□□□□ -0.28
TOP3A-215ENST00000583328 NR1H3Q13133 447 aa13.28□□□□□ -0.28
TOP3A-215ENST00000583328 ZNF268Q14587 947 aaPredicted RBP13.28□□□□□ -0.28
TOP3A-215ENST00000583328 MTF1Q14872 753 aa13.28□□□□□ -0.28
TOP3A-215ENST00000583328 DTHD1Q6ZMT9 781 aa13.28□□□□□ -0.28
TOP3A-215ENST00000583328 OSCP1Q8WVF1 389 aa13.28□□□□□ -0.28
TOP3A-215ENST00000583328 PIGKQ92643 395 aa13.28□□□□□ -0.28
TOP3A-215ENST00000583328 PYM1Q9BRP8 204 aaKnown RBP13.28□□□□□ -0.28
TOP3A-215ENST00000583328 SLC32A1Q9H598 525 aa13.28□□□□□ -0.28
TOP3A-215ENST00000583328 TRPC7Q9HCX4 862 aa13.28□□□□□ -0.28
TOP3A-215ENST00000583328 LHX6Q9UPM6 363 aa13.28□□□□□ -0.28
TOP3A-215ENST00000583328 LIMCH1Q9UPQ0 1083 aa13.28□□□□□ -0.28
TOP3A-215ENST00000583328 PCDHB5Q9Y5E4 795 aa13.28□□□□□ -0.28
TOP3A-215ENST00000583328 ANO9A1A5B4 782 aa13.27□□□□□ -0.29
TOP3A-215ENST00000583328 HNRNPDLO14979 420 aaKnown RBP13.27□□□□□ -0.29
TOP3A-215ENST00000583328 PRPF40AO75400 957 aaKnown RBP13.27□□□□□ -0.29
TOP3A-215ENST00000583328 NFICP08651 508 aa13.27□□□□□ -0.29
TOP3A-215ENST00000583328 BCKDHBP21953 392 aa13.27□□□□□ -0.29
TOP3A-215ENST00000583328 GPR15P49685 360 aa13.27□□□□□ -0.29
TOP3A-215ENST00000583328 TAF6P49848 677 aa13.27□□□□□ -0.29
TOP3A-215ENST00000583328 NCKAP1LP55160 1127 aa13.27□□□□□ -0.29
TOP3A-215ENST00000583328 FAM160A1Q05DH4 1040 aa13.27□□□□□ -0.29
TOP3A-215ENST00000583328 RING1Q06587 406 aa13.27□□□□□ -0.29
TOP3A-215ENST00000583328 ST3GAL1Q11201 340 aa13.27□□□□□ -0.29
TOP3A-215ENST00000583328 TMEM132DQ14C87 1099 aa13.27□□□□□ -0.29
TOP3A-215ENST00000583328 SDHAF4Q5VUM1 108 aa13.27□□□□□ -0.29
TOP3A-215ENST00000583328 WSCD1Q658N2 575 aa13.27□□□□□ -0.29
TOP3A-215ENST00000583328 ANO7Q6IWH7 933 aa13.27□□□□□ -0.29
TOP3A-215ENST00000583328 TTC30AQ86WT1 665 aa13.27□□□□□ -0.29
TOP3A-215ENST00000583328 SYT2Q8N9I0 419 aaPredicted RBP13.27□□□□□ -0.29
TOP3A-215ENST00000583328 FBXO18Q8NFZ0 1043 aa13.27□□□□□ -0.29
TOP3A-215ENST00000583328 EZH1Q92800 747 aaPredicted RBP13.27□□□□□ -0.29
TOP3A-215ENST00000583328 ATP2A3Q93084 1043 aa13.27□□□□□ -0.29
TOP3A-215ENST00000583328 ZSCAN31Q96LW9 406 aaPredicted RBP13.27□□□□□ -0.29
TOP3A-215ENST00000583328 PLIN2Q99541 437 aa13.27□□□□□ -0.29
TOP3A-215ENST00000583328 MMTAG2Q9BU76 263 aaKnown RBP13.27□□□□□ -0.29
TOP3A-215ENST00000583328 MSTO1Q9BUK6 570 aa13.27□□□□□ -0.29
TOP3A-215ENST00000583328 PCDHB6Q9Y5E3 794 aa13.27□□□□□ -0.29
TOP3A-215ENST00000583328 WNT6Q9Y6F9 365 aa13.27□□□□□ -0.29
TOP3A-215ENST00000583328 IGF2RP11717 2491 aa13.27□□□□□ -0.29
TOP3A-215ENST00000583328 ZFYVE26Q68DK2 2539 aa13.27□□□□□ -0.29
TOP3A-215ENST00000583328 NPHP3-ACAD11A0A0J9YXS1 232 aa13.26□□□□□ -0.29
TOP3A-215ENST00000583328 LAD1O00515 517 aa13.26□□□□□ -0.29
TOP3A-215ENST00000583328 HYAL3O43820 417 aaPredicted RBP13.26□□□□□ -0.29
TOP3A-215ENST00000583328 FAM189A1O60320 539 aa13.26□□□□□ -0.29
TOP3A-215ENST00000583328 PLA2G4BP0C869 781 aa13.26□□□□□ -0.29
TOP3A-215ENST00000583328 FASNP49327 2511 aaKnown RBP13.26□□□□□ -0.29
TOP3A-215ENST00000583328 SEC13P55735 322 aa13.26□□□□□ -0.29
TOP3A-215ENST00000583328 LMAN2Q12907 356 aa13.26□□□□□ -0.29
TOP3A-215ENST00000583328 IL17AQ16552 155 aa13.26□□□□□ -0.29
TOP3A-215ENST00000583328 C2orf27AQ580R0 203 aa13.26□□□□□ -0.29
TOP3A-215ENST00000583328 CCDC83Q8IWF9 413 aa13.26□□□□□ -0.29
TOP3A-215ENST00000583328 STKLD1Q8NE28 680 aa13.26□□□□□ -0.29
TOP3A-215ENST00000583328 USP33Q8TEY7 942 aa13.26□□□□□ -0.29
TOP3A-215ENST00000583328 PI4K2AQ9BTU6 479 aa13.26□□□□□ -0.29
TOP3A-215ENST00000583328 NUSAP1Q9BXS6 441 aaKnown RBP13.26□□□□□ -0.29
TOP3A-215ENST00000583328 KCND2Q9NZV8 630 aa13.26□□□□□ -0.29
TOP3A-215ENST00000583328 UXTQ9UBK9 157 aaPredicted RBP13.26□□□□□ -0.29
TOP3A-215ENST00000583328 CPSF3Q9UKF6 684 aaKnown RBP13.26□□□□□ -0.29
TOP3A-215ENST00000583328 CIZ1Q9ULV3 898 aaPredicted RBP13.26□□□□□ -0.29
TOP3A-215ENST00000583328 DERAQ9Y315 318 aa13.26□□□□□ -0.29
TOP3A-215ENST00000583328 NEUROG3Q9Y4Z2 214 aa13.26□□□□□ -0.29
TOP3A-215ENST00000583328 FRYQ5TBA9 3013 aa13.26□□□□□ -0.29
TOP3A-215ENST00000583328 NUP210Q8TEM1 1887 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms