RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 PTPAQ15257 358 aa17.44■□□□□ 0.38
SREBF1-221ENST00000583080 ZC2HC1CQ53FD0 456 aaPredicted RBP17.44■□□□□ 0.38
SREBF1-221ENST00000583080 C2orf15Q8WU43 125 aaKnown RBP17.44■□□□□ 0.38
SREBF1-221ENST00000583080 EZH1Q92800 747 aaPredicted RBP17.44■□□□□ 0.38
SREBF1-221ENST00000583080 ZHX3Q9H4I2 956 aa17.44■□□□□ 0.38
SREBF1-221ENST00000583080 DPP3Q9NY33 737 aa17.44■□□□□ 0.38
SREBF1-221ENST00000583080 MYO16Q9Y6X6 1858 aa17.44■□□□□ 0.38
SREBF1-221ENST00000583080 ATG13O75143 517 aa17.43■□□□□ 0.38
SREBF1-221ENST00000583080 AKAP3O75969 853 aa17.43■□□□□ 0.38
SREBF1-221ENST00000583080 GTF2BQ00403 316 aa17.43■□□□□ 0.38
SREBF1-221ENST00000583080 CCDC142Q17RM4 750 aa17.43■□□□□ 0.38
SREBF1-221ENST00000583080 PLK5Q496M5 336 aa17.43■□□□□ 0.38
SREBF1-221ENST00000583080 ARL6IP4Q66PJ3 421 aaKnown RBP17.43■□□□□ 0.38
SREBF1-221ENST00000583080 ADALQ6DHV7 355 aa17.43■□□□□ 0.38
SREBF1-221ENST00000583080 THEM5Q8N1Q8 247 aa17.43■□□□□ 0.38
SREBF1-221ENST00000583080 PI4K2AQ9BTU6 479 aa17.43■□□□□ 0.38
SREBF1-221ENST00000583080 CCSER1Q9C0I3 900 aa17.43■□□□□ 0.38
SREBF1-221ENST00000583080 ASB7Q9H672 318 aa17.43■□□□□ 0.38
SREBF1-221ENST00000583080 KIF9Q9HAQ2 790 aa17.43■□□□□ 0.38
SREBF1-221ENST00000583080 TDP1Q9NUW8 608 aa17.43■□□□□ 0.38
SREBF1-221ENST00000583080 RALYQ9UKM9 306 aaKnown RBP17.43■□□□□ 0.38
SREBF1-221ENST00000583080 MAGED2Q9UNF1 606 aaPredicted RBP17.43■□□□□ 0.38
SREBF1-221ENST00000583080 PCDHGA5Q9Y5G8 931 aa17.43■□□□□ 0.38
SREBF1-221ENST00000583080 DCLK1O15075 740 aa17.42■□□□□ 0.38
SREBF1-221ENST00000583080 EIF5BO60841 1220 aaKnown RBP17.42■□□□□ 0.38
SREBF1-221ENST00000583080 TBCAO75347 108 aaKnown RBP17.42■□□□□ 0.38
SREBF1-221ENST00000583080 KRT18P05783 430 aaKnown RBP17.42■□□□□ 0.38
SREBF1-221ENST00000583080 PLCG1P19174 1290 aa17.42■□□□□ 0.38
SREBF1-221ENST00000583080 SCP2P22307 547 aa17.42■□□□□ 0.38
SREBF1-221ENST00000583080 DDX6P26196 483 aaKnown RBP eCLIP17.42■□□□□ 0.381e-7■■■■■ 60
SREBF1-221ENST00000583080 GALK1P51570 392 aa17.42■□□□□ 0.38
SREBF1-221ENST00000583080 WNT7BP56706 349 aa17.42■□□□□ 0.38
SREBF1-221ENST00000583080 SHC2P98077 582 aa17.42■□□□□ 0.38
SREBF1-221ENST00000583080 GRIN1Q05586 938 aa17.42■□□□□ 0.38
SREBF1-221ENST00000583080 KARSQ15046 597 aaKnown RBP17.42■□□□□ 0.38
SREBF1-221ENST00000583080 CRELD2Q6UXH1 353 aaPredicted RBP17.42■□□□□ 0.38
SREBF1-221ENST00000583080 RPLP0P6Q8NHW5 317 aa17.42■□□□□ 0.38
SREBF1-221ENST00000583080 RAD54LQ92698 747 aa17.42■□□□□ 0.38
SREBF1-221ENST00000583080 ZC3H10Q96K80 434 aaKnown RBP17.42■□□□□ 0.38
SREBF1-221ENST00000583080 FAM84AQ96KN4 292 aa17.42■□□□□ 0.38
SREBF1-221ENST00000583080 P2RY13Q9BPV8 354 aa17.42■□□□□ 0.38
SREBF1-221ENST00000583080 DUSP15Q9H1R2 295 aaPredicted RBP17.42■□□□□ 0.38
SREBF1-221ENST00000583080 ZMYM5Q9UJ78 669 aa17.42■□□□□ 0.38
SREBF1-221ENST00000583080 AGO2Q9UKV8 859 aaKnown RBP17.42■□□□□ 0.38
SREBF1-221ENST00000583080 PCDHB5Q9Y5E4 795 aa17.42■□□□□ 0.38
SREBF1-221ENST00000583080 FRYQ5TBA9 3013 aa17.41■□□□□ 0.38
SREBF1-221ENST00000583080 KPNA7A9QM74 516 aa17.41■□□□□ 0.38
SREBF1-221ENST00000583080 PRPF40AO75400 957 aaKnown RBP17.41■□□□□ 0.38
SREBF1-221ENST00000583080 KCNK5O95279 499 aa17.41■□□□□ 0.38
SREBF1-221ENST00000583080 NEFLP07196 543 aa17.41■□□□□ 0.38
SREBF1-221ENST00000583080 GJA4P35212 333 aa17.41■□□□□ 0.38
SREBF1-221ENST00000583080 SMARCB1Q12824 385 aa17.41■□□□□ 0.38
SREBF1-221ENST00000583080 MTF1Q14872 753 aa17.41■□□□□ 0.38
SREBF1-221ENST00000583080 SCARA3Q6AZY7 606 aa17.41■□□□□ 0.38
SREBF1-221ENST00000583080 CC2D1AQ6P1N0 951 aaPredicted RBP17.41■□□□□ 0.38
SREBF1-221ENST00000583080 MON1AQ86VX9 555 aa17.41■□□□□ 0.38
SREBF1-221ENST00000583080 DCP1BQ8IZD4 617 aaKnown RBP17.41■□□□□ 0.38
SREBF1-221ENST00000583080 CAMKK1Q8N5S9 505 aa17.41■□□□□ 0.38
SREBF1-221ENST00000583080 TTC16Q8NEE8 873 aa17.41■□□□□ 0.38
SREBF1-221ENST00000583080 MRPS31Q92665 395 aaKnown RBP17.41■□□□□ 0.38
SREBF1-221ENST00000583080 CALML4Q96GE6 196 aa17.41■□□□□ 0.38
SREBF1-221ENST00000583080 AK8Q96MA6 479 aa17.41■□□□□ 0.38
SREBF1-221ENST00000583080 SLC22A12Q96S37 553 aa17.41■□□□□ 0.38
SREBF1-221ENST00000583080 LSM14BQ9BX40 385 aaKnown RBP17.41■□□□□ 0.38
SREBF1-221ENST00000583080 STYXL1Q9Y6J8 313 aa17.41■□□□□ 0.38
SREBF1-221ENST00000583080 DRD1P21728 446 aa17.4■□□□□ 0.38
SREBF1-221ENST00000583080 ACAT1P24752 427 aaKnown RBP17.4■□□□□ 0.38
SREBF1-221ENST00000583080 UBA7P41226 1012 aa17.4■□□□□ 0.38
SREBF1-221ENST00000583080 USP4Q13107 963 aa17.4■□□□□ 0.38
SREBF1-221ENST00000583080 ZNF268Q14587 947 aaPredicted RBP17.4■□□□□ 0.38
SREBF1-221ENST00000583080 PDGFRLQ15198 375 aa17.4■□□□□ 0.38
SREBF1-221ENST00000583080 ZNF77Q15935 545 aa17.4■□□□□ 0.38
SREBF1-221ENST00000583080 DDR2Q16832 855 aa17.4■□□□□ 0.38
SREBF1-221ENST00000583080 SV2CQ496J9 727 aa17.4■□□□□ 0.38
SREBF1-221ENST00000583080 RNF43Q68DV7 783 aa17.4■□□□□ 0.38
SREBF1-221ENST00000583080 PDCL2Q8N4E4 241 aa17.4■□□□□ 0.38
SREBF1-221ENST00000583080 ZSWIM2Q8NEG5 633 aa17.4■□□□□ 0.38
SREBF1-221ENST00000583080 ZNF560Q96MR9 790 aa17.4■□□□□ 0.38
SREBF1-221ENST00000583080 EDEM2Q9BV94 578 aa17.4■□□□□ 0.38
SREBF1-221ENST00000583080 ECT2Q9H8V3 914 aa17.4■□□□□ 0.38
SREBF1-221ENST00000583080 TRPC7Q9HCX4 862 aa17.4■□□□□ 0.38
SREBF1-221ENST00000583080 VPS45Q9NRW7 570 aa17.4■□□□□ 0.38
SREBF1-221ENST00000583080 PPP4R2Q9NY27 417 aa17.4■□□□□ 0.38
SREBF1-221ENST00000583080 L1RE1Q9UN81 338 aa17.4■□□□□ 0.38
SREBF1-221ENST00000583080 WNT6Q9Y6F9 365 aa17.4■□□□□ 0.38
SREBF1-221ENST00000583080 SLC26A4O43511 780 aa17.39■□□□□ 0.37
SREBF1-221ENST00000583080 HCRTO43612 131 aa17.39■□□□□ 0.37
SREBF1-221ENST00000583080 CSH1P0DML2 217 aa17.39■□□□□ 0.37
SREBF1-221ENST00000583080 CSH2P0DML3 217 aa17.39■□□□□ 0.37
SREBF1-221ENST00000583080 CYP2F1P24903 491 aa17.39■□□□□ 0.37
SREBF1-221ENST00000583080 ADSSP30520 456 aa17.39■□□□□ 0.37
SREBF1-221ENST00000583080 POLR2BP30876 1174 aaKnown RBP17.39■□□□□ 0.37
SREBF1-221ENST00000583080 TSPY1Q01534 308 aa17.39■□□□□ 0.37
SREBF1-221ENST00000583080 CREB5Q02930 508 aa17.39■□□□□ 0.37
SREBF1-221ENST00000583080 DMC1Q14565 340 aa17.39■□□□□ 0.37
SREBF1-221ENST00000583080 PSAPL1Q6NUJ1 521 aa17.39■□□□□ 0.37
SREBF1-221ENST00000583080 SYT13Q7L8C5 426 aa17.39■□□□□ 0.37
SREBF1-221ENST00000583080 SFR1Q86XK3 245 aa17.39■□□□□ 0.37
SREBF1-221ENST00000583080 CPA6Q8N4T0 437 aa17.39■□□□□ 0.37
SREBF1-221ENST00000583080 RASSF8Q8NHQ8 419 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms