RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 P4HA1P13674 534 aa17.52■□□□□ 0.4
RNF43-206ENST00000582293 ZNF18P17022 549 aa17.52■□□□□ 0.4
RNF43-206ENST00000582293 NDST1P52848 882 aa17.52■□□□□ 0.4
RNF43-206ENST00000582293 NTHL1P78549 312 aa17.52■□□□□ 0.4
RNF43-206ENST00000582293 TSPY1Q01534 308 aa17.52■□□□□ 0.4
RNF43-206ENST00000582293 TWF1Q12792 350 aa17.52■□□□□ 0.4
RNF43-206ENST00000582293 LRMPQ12912 555 aa17.52■□□□□ 0.4
RNF43-206ENST00000582293 MAN2A1Q16706 1144 aa17.52■□□□□ 0.4
RNF43-206ENST00000582293 DPY19L2P1Q6NXN4 242 aa17.52■□□□□ 0.4
RNF43-206ENST00000582293 RTL10Q7L3V2 364 aa17.52■□□□□ 0.4
RNF43-206ENST00000582293 ARHGEF19Q8IW93 802 aa17.52■□□□□ 0.4
RNF43-206ENST00000582293 FAM114A1Q8IWE2 563 aa17.52■□□□□ 0.4
RNF43-206ENST00000582293 EHBP1Q8NDI1 1231 aa17.52■□□□□ 0.4
RNF43-206ENST00000582293 SMG7Q92540 1137 aaKnown RBP17.52■□□□□ 0.4
RNF43-206ENST00000582293 KAT5Q92993 513 aa17.52■□□□□ 0.4
RNF43-206ENST00000582293 FAXDC2Q96IV6 333 aa17.52■□□□□ 0.4
RNF43-206ENST00000582293 TUBGCP2Q9BSJ2 902 aa17.52■□□□□ 0.4
RNF43-206ENST00000582293 IMPG2Q9BZV3 1241 aa17.52■□□□□ 0.4
RNF43-206ENST00000582293 CYP3A43Q9HB55 503 aa17.52■□□□□ 0.4
RNF43-206ENST00000582293 HCFC1R1Q9NWW0 138 aa17.52■□□□□ 0.4
RNF43-206ENST00000582293 HSFX1Q9UBD0 423 aa17.52■□□□□ 0.4
RNF43-206ENST00000582293 VCANP13611 3396 aa17.52■□□□□ 0.39
RNF43-206ENST00000582293 DOCK6Q96HP0 2047 aa17.52■□□□□ 0.39
RNF43-206ENST00000582293 CILPO75339 1184 aa17.51■□□□□ 0.39
RNF43-206ENST00000582293 CLSTN1O94985 981 aa17.51■□□□□ 0.39
RNF43-206ENST00000582293 PTPN1P18031 435 aaKnown RBP17.51■□□□□ 0.39
RNF43-206ENST00000582293 ATF6P18850 670 aa17.51■□□□□ 0.39
RNF43-206ENST00000582293 CYP2F1P24903 491 aa17.51■□□□□ 0.39
RNF43-206ENST00000582293 ELF1P32519 619 aa17.51■□□□□ 0.39
RNF43-206ENST00000582293 GPR15P49685 360 aa17.51■□□□□ 0.39
RNF43-206ENST00000582293 APBA1Q02410 837 aa17.51■□□□□ 0.39
RNF43-206ENST00000582293 SMARCB1Q12824 385 aa17.51■□□□□ 0.39
RNF43-206ENST00000582293 IQCB1Q15051 598 aa17.51■□□□□ 0.39
RNF43-206ENST00000582293 VWA3BQ502W6 1294 aa17.51■□□□□ 0.39
RNF43-206ENST00000582293 MDH1BQ5I0G3 518 aa17.51■□□□□ 0.39
RNF43-206ENST00000582293 TJAP1Q5JTD0 557 aa17.51■□□□□ 0.39
RNF43-206ENST00000582293 CES5AQ6NT32 575 aa17.51■□□□□ 0.39
RNF43-206ENST00000582293 PAQR9Q6ZVX9 377 aa17.51■□□□□ 0.39
RNF43-206ENST00000582293 APTXQ7Z2E3 356 aaKnown RBP17.51■□□□□ 0.39
RNF43-206ENST00000582293 B3GALNT2Q8NCR0 500 aa17.51■□□□□ 0.39
RNF43-206ENST00000582293 MYCBPAPQ8TBZ2 947 aa17.51■□□□□ 0.39
RNF43-206ENST00000582293 SPPL2BQ8TCT7 592 aa17.51■□□□□ 0.39
RNF43-206ENST00000582293 C2orf15Q8WU43 125 aaKnown RBP17.51■□□□□ 0.39
RNF43-206ENST00000582293 MYLPFQ96A32 169 aa17.51■□□□□ 0.39
RNF43-206ENST00000582293 PCED1BQ96HM7 432 aa17.51■□□□□ 0.39
RNF43-206ENST00000582293 CRACR2AQ9BSW2 395 aa17.51■□□□□ 0.39
RNF43-206ENST00000582293 ELOVL4Q9GZR5 314 aa17.51■□□□□ 0.39
RNF43-206ENST00000582293 INTS2Q9H0H0 1204 aaKnown RBP17.51■□□□□ 0.39
RNF43-206ENST00000582293 TMEM30AQ9NV96 361 aa17.51■□□□□ 0.39
RNF43-206ENST00000582293 ABI2Q9NYB9 513 aaPredicted RBP17.51■□□□□ 0.39
RNF43-206ENST00000582293 DNMT3BQ9UBC3 853 aaKnown RBP17.51■□□□□ 0.39
RNF43-206ENST00000582293 PCDHB5Q9Y5E4 795 aa17.51■□□□□ 0.39
RNF43-206ENST00000582293 SPDYE4A6NLX3 237 aa17.5■□□□□ 0.39
RNF43-206ENST00000582293 CD58P19256 250 aa17.5■□□□□ 0.39
RNF43-206ENST00000582293 SLC9A1P19634 815 aa17.5■□□□□ 0.39
RNF43-206ENST00000582293 EEF1GP26641 437 aaKnown RBP17.5■□□□□ 0.39
RNF43-206ENST00000582293 MTHFRP42898 656 aa17.5■□□□□ 0.39
RNF43-206ENST00000582293 CACNA2D1P54289 1103 aa17.5■□□□□ 0.39
RNF43-206ENST00000582293 CUL2Q13617 745 aa17.5■□□□□ 0.39
RNF43-206ENST00000582293 KRT31Q15323 416 aa17.5■□□□□ 0.39
RNF43-206ENST00000582293 NFE2Q16621 373 aaPredicted RBP17.5■□□□□ 0.39
RNF43-206ENST00000582293 CFAP221Q4G0U5 840 aa17.5■□□□□ 0.39
RNF43-206ENST00000582293 WDR44Q5JSH3 913 aa17.5■□□□□ 0.39
RNF43-206ENST00000582293 ATAT1Q5SQI0 421 aa17.5■□□□□ 0.39
RNF43-206ENST00000582293 PHLDB3Q6NSJ2 640 aa17.5■□□□□ 0.39
RNF43-206ENST00000582293 ELMSAN1Q6PJG2 1045 aa17.5■□□□□ 0.39
RNF43-206ENST00000582293 CYP26C1Q6V0L0 522 aa17.5■□□□□ 0.39
RNF43-206ENST00000582293 GRASPQ7Z6J2 395 aaPredicted RBP17.5■□□□□ 0.39
RNF43-206ENST00000582293 ACOT1Q86TX2 421 aa17.5■□□□□ 0.39
RNF43-206ENST00000582293 UNC93AQ86WB7 457 aa17.5■□□□□ 0.39
RNF43-206ENST00000582293 CRYBG2Q8N1P7 616 aa17.5■□□□□ 0.39
RNF43-206ENST00000582293 NECAB3Q96P71 396 aaPredicted RBP17.5■□□□□ 0.39
RNF43-206ENST00000582293 LRRC3Q9BY71 257 aa17.5■□□□□ 0.39
RNF43-206ENST00000582293 B3GNT5Q9BYG0 378 aa17.5■□□□□ 0.39
RNF43-206ENST00000582293 NDST4Q9H3R1 872 aa17.5■□□□□ 0.39
RNF43-206ENST00000582293 WDR6Q9NNW5 1121 aaKnown RBP17.5■□□□□ 0.39
RNF43-206ENST00000582293 SIX2Q9NPC8 291 aa17.5■□□□□ 0.39
RNF43-206ENST00000582293 CISHQ9NSE2 258 aa17.5■□□□□ 0.39
RNF43-206ENST00000582293 TAB2Q9NYJ8 693 aa17.5■□□□□ 0.39
RNF43-206ENST00000582293 MAGEC2Q9UBF1 373 aaPredicted RBP17.5■□□□□ 0.39
RNF43-206ENST00000582293 CLDN5O00501 218 aa17.49■□□□□ 0.39
RNF43-206ENST00000582293 ATP1A3P13637 1013 aa17.49■□□□□ 0.39
RNF43-206ENST00000582293 ACO1P21399 889 aaKnown RBP17.49■□□□□ 0.39
RNF43-206ENST00000582293 ZP2Q05996 745 aa17.49■□□□□ 0.39
RNF43-206ENST00000582293 MGAT5BQ3V5L5 792 aa17.49■□□□□ 0.39
RNF43-206ENST00000582293 POTEHQ6S545 545 aa17.49■□□□□ 0.39
RNF43-206ENST00000582293 HS6ST3Q8IZP7 471 aa17.49■□□□□ 0.39
RNF43-206ENST00000582293 CCDC150Q8NCX0 1101 aa17.49■□□□□ 0.39
RNF43-206ENST00000582293 STKLD1Q8NE28 680 aa17.49■□□□□ 0.39
RNF43-206ENST00000582293 RIPOR3Q96MK2 946 aa17.49■□□□□ 0.39
RNF43-206ENST00000582293 KREMEN1Q96MU8 473 aa17.49■□□□□ 0.39
RNF43-206ENST00000582293 NECTIN4Q96NY8 510 aa17.49■□□□□ 0.39
RNF43-206ENST00000582293 NT5C1BQ96P26 610 aa17.49■□□□□ 0.39
RNF43-206ENST00000582293 SEPT5Q99719 369 aaPredicted RBP17.49■□□□□ 0.39
RNF43-206ENST00000582293 PHF7Q9BWX1 381 aaPredicted RBP17.49■□□□□ 0.39
RNF43-206ENST00000582293 ABCB6Q9NP58 842 aa17.49■□□□□ 0.39
RNF43-206ENST00000582293 CD320Q9NPF0 282 aa17.49■□□□□ 0.39
RNF43-206ENST00000582293 GCNT4Q9P109 453 aa17.49■□□□□ 0.39
RNF43-206ENST00000582293 LIMA1Q9UHB6 759 aaKnown RBP17.49■□□□□ 0.39
RNF43-206ENST00000582293 AJAP1Q9UKB5 411 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms