RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 PCDHB13Q9Y5F0 798 aa19.28■□□□□ 0.68
MKS1-209ENST00000580127 CACNA1BQ00975 2339 aa19.28■□□□□ 0.68
MKS1-209ENST00000580127 TRDMT1O14717 391 aaKnown RBP19.27■□□□□ 0.68
MKS1-209ENST00000580127 RPP40O75818 363 aaKnown RBP19.27■□□□□ 0.68
MKS1-209ENST00000580127 ADRB1P08588 477 aa19.27■□□□□ 0.68
MKS1-209ENST00000580127 CCDC192P0DO97 292 aa19.27■□□□□ 0.68
MKS1-209ENST00000580127 DRD1P21728 446 aa19.27■□□□□ 0.68
MKS1-209ENST00000580127 TFAMQ00059 246 aaKnown RBP19.27■□□□□ 0.68
MKS1-209ENST00000580127 DMWDQ09019 674 aa19.27■□□□□ 0.68
MKS1-209ENST00000580127 NR1H3Q13133 447 aa19.27■□□□□ 0.68
MKS1-209ENST00000580127 SRSF5Q13243 272 aaKnown RBP19.27■□□□□ 0.68
MKS1-209ENST00000580127 SF3A1Q15459 793 aaKnown RBP19.27■□□□□ 0.68
MKS1-209ENST00000580127 FBXO43Q4G163 708 aa19.27■□□□□ 0.68
MKS1-209ENST00000580127 AASDHQ4L235 1098 aaPredicted RBP19.27■□□□□ 0.68
MKS1-209ENST00000580127 TMEM196Q5HYL7 178 aa19.27■□□□□ 0.68
MKS1-209ENST00000580127 SV2BQ7L1I2 683 aa19.27■□□□□ 0.68
MKS1-209ENST00000580127 LRRTM3Q86VH5 581 aa19.27■□□□□ 0.68
MKS1-209ENST00000580127 SYCP3Q8IZU3 236 aa19.27■□□□□ 0.68
MKS1-209ENST00000580127 GAB3Q8WWW8 586 aa19.27■□□□□ 0.68
MKS1-209ENST00000580127 CHAMP1Q96JM3 812 aa19.27■□□□□ 0.68
MKS1-209ENST00000580127 ACBD6Q9BR61 282 aa19.27■□□□□ 0.68
MKS1-209ENST00000580127 ABCB6Q9NP58 842 aa19.27■□□□□ 0.68
MKS1-209ENST00000580127 MAGED2Q9UNF1 606 aaPredicted RBP19.27■□□□□ 0.68
MKS1-209ENST00000580127 AKAP3O75969 853 aa19.26■□□□□ 0.67
MKS1-209ENST00000580127 F11P03951 625 aa19.26■□□□□ 0.67
MKS1-209ENST00000580127 PDCP20941 246 aa19.26■□□□□ 0.67
MKS1-209ENST00000580127 ZNF268Q14587 947 aaPredicted RBP19.26■□□□□ 0.67
MKS1-209ENST00000580127 DYMQ7RTS9 669 aa19.26■□□□□ 0.67
MKS1-209ENST00000580127 FSIP1Q8NA03 581 aa19.26■□□□□ 0.67
MKS1-209ENST00000580127 FIZ1Q96SL8 496 aa19.26■□□□□ 0.67
MKS1-209ENST00000580127 SMG9Q9H0W8 520 aaKnown RBP19.26■□□□□ 0.67
MKS1-209ENST00000580127 EBF3Q9H4W6 596 aa19.26■□□□□ 0.67
MKS1-209ENST00000580127 AGAP1Q9UPQ3 857 aa19.26■□□□□ 0.67
MKS1-209ENST00000580127 ACACBO00763 2458 aa19.26■□□□□ 0.67
MKS1-209ENST00000580127 SDK1Q7Z5N4 2213 aa19.25■□□□□ 0.67
MKS1-209ENST00000580127 AXIN1O15169 862 aa19.25■□□□□ 0.67
MKS1-209ENST00000580127 ZNF806P0C7X5 589 aa19.25■□□□□ 0.67
MKS1-209ENST00000580127 LHX1P48742 406 aa19.25■□□□□ 0.67
MKS1-209ENST00000580127 ALCAMQ13740 583 aa19.25■□□□□ 0.67
MKS1-209ENST00000580127 RRAGBQ5VZM2 374 aa19.25■□□□□ 0.67
MKS1-209ENST00000580127 CPA6Q8N4T0 437 aa19.25■□□□□ 0.67
MKS1-209ENST00000580127 SPATA18Q8TC71 538 aa19.25■□□□□ 0.67
MKS1-209ENST00000580127 USP13Q92995 863 aaPredicted RBP19.25■□□□□ 0.67
MKS1-209ENST00000580127 P2RY13Q9BPV8 354 aa19.25■□□□□ 0.67
MKS1-209ENST00000580127 FAM213AQ9BRX8 229 aa19.25■□□□□ 0.67
MKS1-209ENST00000580127 PI4K2AQ9BTU6 479 aa19.25■□□□□ 0.67
MKS1-209ENST00000580127 SPAG17Q6Q759 2223 aa19.25■□□□□ 0.67
MKS1-209ENST00000580127 KIF26AQ9ULI4 1882 aaPredicted RBP19.24■□□□□ 0.67
MKS1-209ENST00000580127 EXTL3O43909 919 aa19.24■□□□□ 0.67
MKS1-209ENST00000580127 USP17L7P0C7H9 530 aa19.24■□□□□ 0.67
MKS1-209ENST00000580127 HMGA1P17096 107 aaKnown RBP19.24■□□□□ 0.67
MKS1-209ENST00000580127 PCSK1P29120 753 aa19.24■□□□□ 0.67
MKS1-209ENST00000580127 PDE6CP51160 858 aa19.24■□□□□ 0.67
MKS1-209ENST00000580127 CDR1P51861 262 aa19.24■□□□□ 0.67
MKS1-209ENST00000580127 LIMK1P53667 647 aa19.24■□□□□ 0.67
MKS1-209ENST00000580127 RBP5P82980 135 aa19.24■□□□□ 0.67
MKS1-209ENST00000580127 C8orf34Q49A92 452 aa19.24■□□□□ 0.67
MKS1-209ENST00000580127 TXNDC8Q6A555 127 aa19.24■□□□□ 0.67
MKS1-209ENST00000580127 CRELD2Q6UXH1 353 aaPredicted RBP19.24■□□□□ 0.67
MKS1-209ENST00000580127 SFR1Q86XK3 245 aa19.24■□□□□ 0.67
MKS1-209ENST00000580127 CSGALNACT2Q8N6G5 542 aa19.24■□□□□ 0.67
MKS1-209ENST00000580127 LRRC52Q8N7C0 313 aa19.24■□□□□ 0.67
MKS1-209ENST00000580127 LEO1Q8WVC0 666 aaPredicted RBP19.24■□□□□ 0.67
MKS1-209ENST00000580127 ARRDC1-AS1Q9H2J1 176 aa19.24■□□□□ 0.67
MKS1-209ENST00000580127 DDX43Q9NXZ2 648 aaKnown RBP19.24■□□□□ 0.67
MKS1-209ENST00000580127 ITGA11Q9UKX5 1188 aa19.24■□□□□ 0.67
MKS1-209ENST00000580127 PCDHGA5Q9Y5G8 931 aa19.24■□□□□ 0.67
MKS1-209ENST00000580127 DENND4CQ5VZ89 1909 aa19.23■□□□□ 0.67
MKS1-209ENST00000580127 TRAV19A0A0A6YYK7 116 aa19.23■□□□□ 0.67
MKS1-209ENST00000580127 TISP43B9A030 160 aa19.23■□□□□ 0.67
MKS1-209ENST00000580127 GARTP22102 1010 aa19.23■□□□□ 0.67
MKS1-209ENST00000580127 POLR2BP30876 1174 aaKnown RBP19.23■□□□□ 0.67
MKS1-209ENST00000580127 GALK1P51570 392 aa19.23■□□□□ 0.67
MKS1-209ENST00000580127 MYO1EQ12965 1108 aa19.23■□□□□ 0.67
MKS1-209ENST00000580127 L1TD1Q5T7N2 865 aaKnown RBP19.23■□□□□ 0.67
MKS1-209ENST00000580127 FSTL4Q6MZW2 842 aa19.23■□□□□ 0.67
MKS1-209ENST00000580127 STXBP4Q6ZWJ1 553 aa19.23■□□□□ 0.67
MKS1-209ENST00000580127 SPATA2LQ8IUW3 424 aaPredicted RBP19.23■□□□□ 0.67
MKS1-209ENST00000580127 PDCL2Q8N4E4 241 aa19.23■□□□□ 0.67
MKS1-209ENST00000580127 ATP2A3Q93084 1043 aa19.23■□□□□ 0.67
MKS1-209ENST00000580127 TRMT2BQ96GJ1 504 aaKnown RBP19.23■□□□□ 0.67
MKS1-209ENST00000580127 TMEM206Q9H813 350 aa19.23■□□□□ 0.67
MKS1-209ENST00000580127 DUS2Q9NX74 493 aaKnown RBP19.23■□□□□ 0.67
MKS1-209ENST00000580127 RBAKQ9NYW8 714 aaPredicted RBP19.23■□□□□ 0.67
MKS1-209ENST00000580127 ATG2BQ96BY7 2078 aa19.23■□□□□ 0.67
MKS1-209ENST00000580127 EPG5Q9HCE0 2579 aa19.22■□□□□ 0.67
MKS1-209ENST00000580127 RHOBTB1O94844 696 aa19.22■□□□□ 0.67
MKS1-209ENST00000580127 GCNT3O95395 438 aa19.22■□□□□ 0.67
MKS1-209ENST00000580127 ITGB3P05106 788 aa19.22■□□□□ 0.67
MKS1-209ENST00000580127 KRT19P08727 400 aa19.22■□□□□ 0.67
MKS1-209ENST00000580127 KCNA4P22459 653 aa19.22■□□□□ 0.67
MKS1-209ENST00000580127 ADSSP30520 456 aa19.22■□□□□ 0.67
MKS1-209ENST00000580127 IFNAR2P48551 515 aa19.22■□□□□ 0.67
MKS1-209ENST00000580127 FAM160A1Q05DH4 1040 aa19.22■□□□□ 0.67
MKS1-209ENST00000580127 ELF2Q15723 593 aa19.22■□□□□ 0.67
MKS1-209ENST00000580127 WDR44Q5JSH3 913 aa19.22■□□□□ 0.67
MKS1-209ENST00000580127 CCDC73Q6ZRK6 1079 aa19.22■□□□□ 0.67
MKS1-209ENST00000580127 TMEM150AQ86TG1 271 aa19.22■□□□□ 0.67
MKS1-209ENST00000580127 EFCAB13Q8IY85 973 aa19.22■□□□□ 0.67
MKS1-209ENST00000580127 FUBP3Q96I24 572 aaKnown RBP eCLIP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms