RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 GPR62Q9BZJ7 368 aa14.81□□□□□ -0.04
CSNK1D-209ENST00000578904 TTYH1Q9H313 450 aaPredicted RBP14.81□□□□□ -0.04
CSNK1D-209ENST00000578904 LZTS1Q9Y250 596 aa14.81□□□□□ -0.04
CSNK1D-209ENST00000578904 PCDHA13Q9Y5I0 950 aa14.81□□□□□ -0.04
CSNK1D-209ENST00000578904 PLXNA4Q9HCM2 1894 aa14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 A8MXQ7 604 aa14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 GRM6O15303 877 aa14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 SOD2P04179 222 aa14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 CD19P15391 556 aa14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 PCSK1P29120 753 aa14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 RAP1GAPP47736 663 aa14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 VAV2P52735 878 aa14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 NDST1P52848 882 aa14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 CDH8P55286 799 aa14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 SNX16P57768 344 aa14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 GFPT1Q06210 699 aaPredicted RBP14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 MTF1Q14872 753 aa14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 SOWAHAQ2M3V2 549 aa14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 SGO2Q562F6 1265 aa14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 FAM171A1Q5VUB5 890 aa14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 ZNF662Q6ZS27 426 aa14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 TOGARAM2Q6ZUX3 1019 aa14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 NOP9Q86U38 636 aaKnown RBP14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 CEP57Q86XR8 500 aa14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 VPS52Q8N1B4 723 aa14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 SPPL3Q8TCT6 385 aa14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 ELMO3Q96BJ8 720 aa14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 TRIM11Q96F44 468 aa14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 CALR3Q96L12 384 aaKnown RBP14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 HEXIM2Q96MH2 286 aaKnown RBP14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 ZNF518BQ9C0D4 1074 aa14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 ENTPD7Q9NQZ7 604 aa14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 TLR9Q9NR96 1032 aa14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 SPTLC3Q9NUV7 552 aa14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 NAGPAQ9UK23 515 aa14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 NOCTQ9UK39 431 aaKnown RBP14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 PCDHB8Q9UN66 801 aa14.8□□□□□ -0.04
CSNK1D-209ENST00000578904 A0A087X0T9 212 aa14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 M0QZQ0 153 aa14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 ZNF500O60304 480 aaPredicted RBP14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 RTN2O75298 545 aa14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 LSM8O95777 96 aaKnown RBP14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 URODP06132 367 aa14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 H2AFZP0C0S5 128 aa14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 FAM228BP0C875 321 aa14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 TYMPP19971 482 aa14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 TKTP29401 623 aaKnown RBP14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 CA8P35219 290 aa14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 GLUD2P49448 558 aa14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 RAD23BP54727 409 aa14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 IFI16Q16666 785 aaKnown RBP14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 USP41Q3LFD5 358 aa14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 ZNF394Q53GI3 561 aa14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 TAF3Q5VWG9 929 aa14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 KIAA1841Q6NSI8 718 aa14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 H2AFVQ71UI9 128 aa14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 GLYCTKQ8IVS8 523 aa14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 RNF168Q8IYW5 571 aaPredicted RBP14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 DEFB123Q8N688 67 aa14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 TMEM35BQ8NCS4 154 aa14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 SLC30A5Q8TAD4 765 aa14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 ZNF606Q8WXB4 792 aa14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 FAM161BQ96MY7 647 aa14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 NOX5Q96PH1 765 aa14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 TCF25Q9BQ70 676 aa14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 DESI2Q9BSY9 194 aa14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 TTPALQ9BTX7 342 aa14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 MIS12Q9H081 205 aa14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 LMAN2LQ9H0V9 348 aa14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 PRDM12Q9H4Q4 367 aa14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 TRMT1Q9NXH9 659 aaKnown RBP14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 PCDHGC3Q9UN70 934 aa14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 STXBP5LQ9Y2K9 1186 aa14.79□□□□□ -0.04
CSNK1D-209ENST00000578904 RFXAPO00287 272 aa14.78□□□□□ -0.04
CSNK1D-209ENST00000578904 DDX3XO00571 662 aaKnown RBP eCLIP14.78□□□□□ -0.04
CSNK1D-209ENST00000578904 SYN3O14994 580 aa14.78□□□□□ -0.04
CSNK1D-209ENST00000578904 EFEMP2O95967 443 aa14.78□□□□□ -0.04
CSNK1D-209ENST00000578904 CYP11A1P05108 521 aa14.78□□□□□ -0.04
CSNK1D-209ENST00000578904 MMEP08473 750 aa14.78□□□□□ -0.04
CSNK1D-209ENST00000578904 DNAJB1P25685 340 aa14.78□□□□□ -0.04
CSNK1D-209ENST00000578904 SLC8A3P57103 927 aa14.78□□□□□ -0.04
CSNK1D-209ENST00000578904 MAPRE1Q15691 268 aaKnown RBP14.78□□□□□ -0.04
CSNK1D-209ENST00000578904 CNGA2Q16280 664 aa14.78□□□□□ -0.04
CSNK1D-209ENST00000578904 PTPROQ16827 1216 aa14.78□□□□□ -0.04
CSNK1D-209ENST00000578904 PLPP4Q5VZY2 271 aa14.78□□□□□ -0.04
CSNK1D-209ENST00000578904 TAS1R1Q7RTX1 841 aa14.78□□□□□ -0.04
CSNK1D-209ENST00000578904 TMC7Q7Z402 723 aa14.78□□□□□ -0.04
CSNK1D-209ENST00000578904 LIMS2Q7Z4I7 341 aa14.78□□□□□ -0.04
CSNK1D-209ENST00000578904 GPIHBP1Q8IV16 184 aa14.78□□□□□ -0.04
CSNK1D-209ENST00000578904 PDCL2Q8N4E4 241 aa14.78□□□□□ -0.04
CSNK1D-209ENST00000578904 ACRBPQ8NEB7 543 aa14.78□□□□□ -0.04
CSNK1D-209ENST00000578904 CTNNBL1Q8WYA6 563 aaPredicted RBP14.78□□□□□ -0.04
CSNK1D-209ENST00000578904 B3GALT6Q96L58 329 aa14.78□□□□□ -0.04
CSNK1D-209ENST00000578904 SYT11Q9BT88 431 aa14.78□□□□□ -0.04
CSNK1D-209ENST00000578904 COL25A1Q9BXS0 654 aaPredicted RBP14.78□□□□□ -0.04
CSNK1D-209ENST00000578904 OXCT2Q9BYC2 517 aaPredicted RBP14.78□□□□□ -0.04
CSNK1D-209ENST00000578904 ZBP1Q9H171 429 aa14.78□□□□□ -0.04
CSNK1D-209ENST00000578904 SDCBP2Q9H190 292 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms