RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 F5H697 171 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 APAF1O14727 1248 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 DCLK1O15075 740 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 PMM2O15305 246 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 PLIN1O60240 522 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 HKR1P10072 659 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 SRGNP10124 158 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 SLC5A1P13866 664 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 ZKSCAN1P17029 563 aaPredicted RBP2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 TGM1P22735 817 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 GATA3P23771 443 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 KLRC1P26715 233 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 CD6P30203 668 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 LRPAP1P30533 357 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 GDF5P43026 501 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 AVPR1BP47901 424 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 PXNP49023 591 aaPredicted RBP2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 IFIT5Q13325 482 aaKnown RBP2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 PICALMQ13492 652 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 BOP1Q14137 746 aaKnown RBP2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 MAP9Q49MG5 647 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 RBM20Q5T481 1227 aaKnown RBP2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 TMEM108Q6UXF1 575 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 SESTD1Q86VW0 696 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 MICU3Q86XE3 530 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 GAS2L3Q86XJ1 694 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 CCDC146Q8IYE0 955 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 Q8N1X5 172 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 MPP5Q8N3R9 675 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 AMER2Q8N7J2 671 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 SSH3Q8TE77 659 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 NEU4Q8WWR8 484 aaPredicted RBP2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 MAML1Q92585 1016 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 LARP4BQ92615 738 aaKnown RBP2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 PGBD1Q96JS3 809 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 Q96MF0 132 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 COQ10AQ96MF6 247 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 STRBPQ96SI9 672 aaKnown RBP2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 NELL2Q99435 816 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 PRRX2Q99811 253 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 MESP1Q9BRJ9 268 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 PTDSS2Q9BVG9 487 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 APOL5Q9BWW9 433 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 UNKQ9C0B0 810 aaKnown RBP2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 MS4A7Q9GZW8 240 aaPredicted RBP2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 CYP4F11Q9HBI6 524 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 PNPLA8Q9NP80 782 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 CASS4Q9NQ75 786 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 ZSCAN32Q9NX65 697 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 KCTD5Q9NXV2 234 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 COL20A1Q9P218 1284 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 SNX13Q9Y5W8 968 aa2.73□□□□□ -1.97
PTP4A1-204ENST00000578299 MAST3O60307 1309 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 CCDC194A0A1B0GVG4 234 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 GRID2IPA4D2P6 1211 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 PYCARD-AS1I3L0S3 204 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 CYR61O00622 381 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 PROM1O43490 865 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 IL18RAPO95256 599 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 PPIFP30405 207 aaKnown RBP2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 ACVRL1P37023 503 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 PIK3CBP42338 1070 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 ZNF134P52741 427 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 NXPH1P58417 271 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 LILRA4P59901 499 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 RPS16P62249 146 aaKnown RBP2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 ITIH3Q06033 890 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 HDAC1Q13547 482 aaPredicted RBP2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 SF3B3Q15393 1217 aaKnown RBP2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 INSCQ1MX18 579 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 MGAT5BQ3V5L5 792 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 C3orf38Q5JPI3 329 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 DCAF12L1Q5VU92 463 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 ICE2Q659A1 982 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 VWA1Q6PCB0 445 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 Q6YL49 198 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 VRK3Q8IV63 474 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 FAM109AQ8N4B1 249 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 B3GALNT2Q8NCR0 500 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 SUPT20HQ8NEM7 779 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 SLC30A5Q8TAD4 765 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 IPCEF1Q8WWN9 437 aaPredicted RBP2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 LINC00476Q8WZB0 136 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 LPIN2Q92539 896 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 SLC9A6Q92581 669 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 SPSB4Q96A44 273 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 ZC3H10Q96K80 434 aaKnown RBP2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 AIFM2Q9BRQ8 373 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 BRIP1Q9BX63 1249 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 TPSD1Q9BZJ3 242 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 AMBRA1Q9C0C7 1298 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 SERHLQ9NQF3 203 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 XPNPEP3Q9NQH7 507 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 SYBUQ9NX95 663 aa2.72□□□□□ -1.97
PTP4A1-204ENST00000578299 LOC102723971A0A1B0GUV8 181 aa2.71□□□□□ -1.98
PTP4A1-204ENST00000578299 TMEM233B4DJY2 109 aa2.71□□□□□ -1.98
PTP4A1-204ENST00000578299 YY2O15391 372 aa2.71□□□□□ -1.98
PTP4A1-204ENST00000578299 MPPED1O15442 326 aa2.71□□□□□ -1.98
PTP4A1-204ENST00000578299 CCP110O43303 1012 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms