RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 C8AP07357 584 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 SRGAP2CP0DJJ0 459 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 TDGF1P13385 188 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 ITGA4P13612 1032 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 NCLP19338 710 aaKnown RBP4.39□□□□□ -1.71
PTPRM-206ENST00000578093 BMP6P22004 513 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 AKAP5P24588 427 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 SFNP31947 248 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 LIG3P49916 1009 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 CSTF1Q05048 431 aaKnown RBP4.39□□□□□ -1.71
PTPRM-206ENST00000578093 LAMTOR4Q0VGL1 99 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 BMS1Q14692 1282 aaKnown RBP4.39□□□□□ -1.71
PTPRM-206ENST00000578093 UBXN2BQ14CS0 331 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 EMC2Q15006 297 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 SLC5A9Q2M3M2 681 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 Q4G0T1 1027 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 SHISA2Q6UWI4 295 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 SYNE3Q6ZMZ3 975 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 TPRG1Q6ZUI0 275 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 TMEM130Q8N3G9 435 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 RNF149Q8NC42 400 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 ZBTB44Q8NCP5 570 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 UBASH3BQ8TF42 649 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 PRPF31Q8WWY3 499 aaKnown RBP4.39□□□□□ -1.71
PTPRM-206ENST00000578093 ING5Q8WYH8 240 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 RSPH1Q8WYR4 309 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 STAMQ92783 540 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 NELL1Q92832 810 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 FGF13Q92913 245 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 BRF1Q92994 677 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 PGBD4Q96DM1 585 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 AIFM3Q96NN9 605 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 FAM193BQ96PV7 902 aaPredicted RBP4.39□□□□□ -1.71
PTPRM-206ENST00000578093 TRIM56Q9BRZ2 755 aaKnown RBP4.39□□□□□ -1.71
PTPRM-206ENST00000578093 SLC26A6Q9BXS9 759 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 CEP41Q9BYV8 373 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 PLA2G2FQ9BZM2 168 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 GLT8D2Q9H1C3 349 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 EPC1Q9H2F5 836 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 DHX33Q9H6R0 707 aaKnown RBP4.39□□□□□ -1.71
PTPRM-206ENST00000578093 AKTIPQ9H8T0 292 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 PIDD1Q9HB75 910 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 NCOA5Q9HCD5 579 aaKnown RBP4.39□□□□□ -1.71
PTPRM-206ENST00000578093 C6orf50Q9HD87 102 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 LTB4R2Q9NPC1 389 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 XPNPEP1Q9NQW7 623 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 PRMT8Q9NR22 394 aaPredicted RBP4.39□□□□□ -1.71
PTPRM-206ENST00000578093 KRT82Q9NSB4 513 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 ZDHHC7Q9NXF8 308 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 KCNK4Q9NYG8 393 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 FBXO4Q9UKT5 387 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 VAV3Q9UKW4 847 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 USP18Q9UMW8 372 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.39□□□□□ -1.71
PTPRM-206ENST00000578093 IGF2RP11717 2491 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 CITO14578 2027 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 DMXL2Q8TDJ6 3036 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 CELSR3Q9NYQ7 3312 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 OBSL1O75147 1896 aa4.39□□□□□ -1.71
PTPRM-206ENST00000578093 FAM208BQ5VWN6 2430 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 CASTOR2A6NHX0 329 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 FAM170BA6NMN3 283 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 C1QTNF9BB2RNN3 333 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 F8W735 103 aaPredicted RBP4.38□□□□□ -1.71
PTPRM-206ENST00000578093 PTGESO14684 152 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 SART1O43290 800 aaKnown RBP4.38□□□□□ -1.71
PTPRM-206ENST00000578093 PRPF3O43395 683 aaKnown RBP4.38□□□□□ -1.71
PTPRM-206ENST00000578093 GAS2O43903 313 aaKnown RBP4.38□□□□□ -1.71
PTPRM-206ENST00000578093 PAGE1O75459 146 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 ADRB1P08588 477 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 SLFN14P0C7P3 912 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 CEBPBP17676 345 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 ARF4P18085 180 aaPredicted RBP4.38□□□□□ -1.71
PTPRM-206ENST00000578093 FCARP24071 287 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 DNM2P50570 870 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 RCAN1P53805 252 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 CCT2P78371 535 aaKnown RBP4.38□□□□□ -1.71
PTPRM-206ENST00000578093 MBTD1Q05BQ5 628 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 SPIRE1Q08AE8 756 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 DMWDQ09019 674 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 MTAPQ13126 283 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 SRSF5Q13243 272 aaKnown RBP4.38□□□□□ -1.71
PTPRM-206ENST00000578093 CAPSQ13938 189 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 NONOQ15233 471 aaKnown RBP eCLIP4.38□□□□□ -1.71
PTPRM-206ENST00000578093 NAB2Q15742 525 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 ST3GAL2Q16842 350 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 USP41Q3LFD5 358 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 ZNF528Q3MIS6 628 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 SLC44A4Q53GD3 710 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 FDX2Q6P4F2 183 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 RSPO2Q6UXX9 243 aaPredicted RBP4.38□□□□□ -1.71
PTPRM-206ENST00000578093 CYP26C1Q6V0L0 522 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 Q6ZUG5 572 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.38□□□□□ -1.71
PTPRM-206ENST00000578093 SRGAP1Q7Z6B7 1085 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 CCDC148Q8NFR7 591 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 RDM1Q8NG50 284 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 SLC7A14Q8TBB6 771 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 HDAC7Q8WUI4 952 aa4.38□□□□□ -1.71
PTPRM-206ENST00000578093 PSPC1Q8WXF1 523 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms