RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 FLCNQ8NFG4 579 aa10.76□□□□□ -0.69
CRLF3-202ENST00000577725 SHC3Q92529 594 aa10.76□□□□□ -0.69
CRLF3-202ENST00000577725 RABGGTAQ92696 567 aa10.76□□□□□ -0.69
CRLF3-202ENST00000577725 RPS6KC1Q96S38 1066 aa10.76□□□□□ -0.69
CRLF3-202ENST00000577725 RTKNQ9BST9 563 aa10.76□□□□□ -0.69
CRLF3-202ENST00000577725 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.76□□□□□ -0.69
CRLF3-202ENST00000577725 IMPG2Q9BZV3 1241 aa10.76□□□□□ -0.69
CRLF3-202ENST00000577725 NIF3L1Q9GZT8 377 aa10.76□□□□□ -0.69
CRLF3-202ENST00000577725 SDCBP2Q9H190 292 aa10.76□□□□□ -0.69
CRLF3-202ENST00000577725 NUCKS1Q9H1E3 243 aaKnown RBP10.76□□□□□ -0.69
CRLF3-202ENST00000577725 DEF6Q9H4E7 631 aa10.76□□□□□ -0.69
CRLF3-202ENST00000577725 ITGA11Q9UKX5 1188 aa10.76□□□□□ -0.69
CRLF3-202ENST00000577725 MYO6Q9UM54 1294 aa10.76□□□□□ -0.69
CRLF3-202ENST00000577725 PPP2R2CQ9Y2T4 447 aa10.76□□□□□ -0.69
CRLF3-202ENST00000577725 DERAQ9Y315 318 aa10.76□□□□□ -0.69
CRLF3-202ENST00000577725 PCDHB4Q9Y5E5 795 aa10.76□□□□□ -0.69
CRLF3-202ENST00000577725 ADGRG1Q9Y653 693 aa10.76□□□□□ -0.69
CRLF3-202ENST00000577725 EPN1Q9Y6I3 576 aaPredicted RBP10.76□□□□□ -0.69
CRLF3-202ENST00000577725 CEP250Q9BV73 2442 aa10.76□□□□□ -0.69
CRLF3-202ENST00000577725 ARL5CA6NH57 179 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 PRR5-ARHGAP8B1AHC4 643 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 C9IYK1 514 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 ZNF263O14978 683 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 AKR1B10O60218 316 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 UPP2O95045 317 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 NDUFA10O95299 355 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 GLP2RO95838 553 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 POMCP01189 267 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 WEE2P0C1S8 567 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 ACO1P21399 889 aaKnown RBP10.75□□□□□ -0.69
CRLF3-202ENST00000577725 IGFBP6P24592 240 aaPredicted RBP10.75□□□□□ -0.69
CRLF3-202ENST00000577725 CLCN1P35523 988 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 CYLC1P35663 651 aaPredicted RBP10.75□□□□□ -0.69
CRLF3-202ENST00000577725 ASPAP45381 313 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 GATMP50440 423 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 RAB27AP51159 221 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 KIF11P52732 1056 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 CDH8P55286 799 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 ARHGAP8P85298 464 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 CYP27A1Q02318 531 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 GCNT1Q02742 428 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 PTK2Q05397 1052 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 GFPT1Q06210 699 aaPredicted RBP10.75□□□□□ -0.69
CRLF3-202ENST00000577725 ORC1Q13415 861 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 SGSM1Q2NKQ1 1148 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 PLEKHG4Q58EX7 1191 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 ZNF667Q5HYK9 610 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 C9orf57Q5W0N0 161 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 ZNF598Q86UK7 904 aaKnown RBP10.75□□□□□ -0.69
CRLF3-202ENST00000577725 NT5DC4Q86YG4 428 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 REXO1L1PQ8IX06 675 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 FAM71AQ8IYT1 594 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 GPR161Q8N6U8 529 aaKnown RBP10.75□□□□□ -0.69
CRLF3-202ENST00000577725 UBR7Q8N806 425 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 OLIG1Q8TAK6 271 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 LNX1Q8TBB1 728 aaPredicted RBP10.75□□□□□ -0.69
CRLF3-202ENST00000577725 SEPT8Q92599 483 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 HPDLQ96IR7 371 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 PPP1R13BQ96KQ4 1090 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 CCDC42Q96M95 316 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 PPP1R10Q96QC0 940 aaKnown RBP10.75□□□□□ -0.69
CRLF3-202ENST00000577725 RSAD1Q9HA92 442 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 RGS18Q9NS28 235 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 SEPT11Q9NVA2 429 aaKnown RBP10.75□□□□□ -0.69
CRLF3-202ENST00000577725 UBQLN1Q9UMX0 589 aaKnown RBP10.75□□□□□ -0.69
CRLF3-202ENST00000577725 NR2E1Q9Y466 385 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 DAAM1Q9Y4D1 1078 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 TDRD15B5MCY1 1934 aaKnown RBP10.75□□□□□ -0.69
CRLF3-202ENST00000577725 GPR179Q6PRD1 2367 aa10.75□□□□□ -0.69
CRLF3-202ENST00000577725 MICAL3Q7RTP6 2002 aa10.74□□□□□ -0.69
CRLF3-202ENST00000577725 A0A0U1RQF3 1178 aa10.74□□□□□ -0.69
CRLF3-202ENST00000577725 DDX3XO00571 662 aaKnown RBP eCLIP10.74□□□□□ -0.69
CRLF3-202ENST00000577725 ENPP3O14638 875 aa10.74□□□□□ -0.69
CRLF3-202ENST00000577725 PI15O43692 258 aa10.74□□□□□ -0.69
CRLF3-202ENST00000577725 ZNF623O75123 536 aa10.74□□□□□ -0.69
CRLF3-202ENST00000577725 FGFR1P11362 822 aa10.74□□□□□ -0.69
CRLF3-202ENST00000577725 TBXAS1P24557 533 aaPredicted RBP10.74□□□□□ -0.69
CRLF3-202ENST00000577725 PRKCIP41743 596 aa10.74□□□□□ -0.69
CRLF3-202ENST00000577725 NRIP1P48552 1158 aa10.74□□□□□ -0.69
CRLF3-202ENST00000577725 CAMK1Q14012 370 aa10.74□□□□□ -0.69
CRLF3-202ENST00000577725 ASTE1Q2TB18 679 aaPredicted RBP10.74□□□□□ -0.69
CRLF3-202ENST00000577725 WDR72Q3MJ13 1102 aa10.74□□□□□ -0.69
CRLF3-202ENST00000577725 TMEM270Q6UE05 265 aa10.74□□□□□ -0.69
CRLF3-202ENST00000577725 ADGRD2Q7Z7M1 963 aa10.74□□□□□ -0.69
CRLF3-202ENST00000577725 NOP9Q86U38 636 aaKnown RBP10.74□□□□□ -0.69
CRLF3-202ENST00000577725 SLC47A2Q86VL8 602 aa10.74□□□□□ -0.69
CRLF3-202ENST00000577725 RBBP8NLQ8NC74 664 aaPredicted RBP10.74□□□□□ -0.69
CRLF3-202ENST00000577725 GSTCDQ8NEC7 633 aa10.74□□□□□ -0.69
CRLF3-202ENST00000577725 PGBD4Q96DM1 585 aa10.74□□□□□ -0.69
CRLF3-202ENST00000577725 RTP3Q9BQQ7 232 aa10.74□□□□□ -0.69
CRLF3-202ENST00000577725 IGSF5Q9NSI5 407 aa10.74□□□□□ -0.69
CRLF3-202ENST00000577725 TRIM10Q9UDY6 481 aa10.74□□□□□ -0.69
CRLF3-202ENST00000577725 HMGXB4Q9UGU5 601 aa10.74□□□□□ -0.69
CRLF3-202ENST00000577725 GIT1Q9Y2X7 761 aa10.74□□□□□ -0.69
CRLF3-202ENST00000577725 R3HCC1Q9Y3T6 440 aaKnown RBP10.74□□□□□ -0.69
CRLF3-202ENST00000577725 A0A087X0T9 212 aa10.73□□□□□ -0.69
CRLF3-202ENST00000577725 SSU72P8A0A1W2PR75 194 aa10.73□□□□□ -0.69
CRLF3-202ENST00000577725 ANO9A1A5B4 782 aa10.73□□□□□ -0.69
CRLF3-202ENST00000577725 RCCD1A6NED2 376 aa10.73□□□□□ -0.69
CRLF3-202ENST00000577725 CASTOR2A6NHX0 329 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms