RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 MXI1P50539 228 aa9.2□□□□□ -0.94
CDH8-203ENST00000577390 AMPD2Q01433 879 aa9.2□□□□□ -0.94
CDH8-203ENST00000577390 SUZ12Q15022 739 aaKnown RBP9.2□□□□□ -0.94
CDH8-203ENST00000577390 PCNX4Q63HM2 1172 aa9.2□□□□□ -0.94
CDH8-203ENST00000577390 DHRS1Q96LJ7 313 aa9.2□□□□□ -0.94
CDH8-203ENST00000577390 LEMD3Q9Y2U8 911 aa9.2□□□□□ -0.94
CDH8-203ENST00000577390 VPS4BO75351 444 aa9.2□□□□□ -0.94
CDH8-203ENST00000577390 VAMP4O75379 141 aa9.2□□□□□ -0.94
CDH8-203ENST00000577390 SP100P23497 879 aaPredicted RBP9.2□□□□□ -0.94
CDH8-203ENST00000577390 STIP1P31948 543 aaKnown RBP9.2□□□□□ -0.94
CDH8-203ENST00000577390 SPIDRQ14159 915 aa9.2□□□□□ -0.94
CDH8-203ENST00000577390 MB21D1Q8N884 522 aa9.2□□□□□ -0.94
CDH8-203ENST00000577390 WDR36Q8NI36 951 aaKnown RBP9.2□□□□□ -0.94
CDH8-203ENST00000577390 VDRP11473 427 aa9.2□□□□□ -0.94
CDH8-203ENST00000577390 COPB2P35606 906 aa9.2□□□□□ -0.94
CDH8-203ENST00000577390 CBX5P45973 191 aa9.2□□□□□ -0.94
CDH8-203ENST00000577390 HSPA13P48723 471 aa9.2□□□□□ -0.94
CDH8-203ENST00000577390 FCHO2Q0JRZ9 810 aa9.2□□□□□ -0.94
CDH8-203ENST00000577390 RC3H1Q5TC82 1133 aaKnown RBP9.2□□□□□ -0.94
CDH8-203ENST00000577390 RPTNQ6XPR3 784 aa9.2□□□□□ -0.94
CDH8-203ENST00000577390 NKD1Q969G9 470 aa9.2□□□□□ -0.94
CDH8-203ENST00000577390 MANSC1Q9H8J5 431 aa9.2□□□□□ -0.94
CDH8-203ENST00000577390 CYP39A1Q9NYL5 469 aa9.2□□□□□ -0.94
CDH8-203ENST00000577390 APOBEC2Q9Y235 224 aaKnown RBP9.2□□□□□ -0.94
CDH8-203ENST00000577390 A0A1B0GTH6 734 aa9.2□□□□□ -0.94
CDH8-203ENST00000577390 DEAF1O75398 565 aaPredicted RBP9.2□□□□□ -0.94
CDH8-203ENST00000577390 CDHR1Q96JP9 859 aa9.2□□□□□ -0.94
CDH8-203ENST00000577390 TUBGCP5Q96RT8 1024 aa9.2□□□□□ -0.94
CDH8-203ENST00000577390 MRPL40Q9NQ50 206 aaKnown RBP9.2□□□□□ -0.94
CDH8-203ENST00000577390 HSPBP1Q9NZL4 362 aa9.2□□□□□ -0.94
CDH8-203ENST00000577390 TMPRSS15P98073 1019 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 EIF2S3LQ2VIR3 472 aaKnown RBP9.19□□□□□ -0.94
CDH8-203ENST00000577390 HIST2H2AA3Q6FI13 130 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 RNF44Q7L0R7 432 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 MIR1-1HGQ9H1L0 117 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 KLHL11Q9NVR0 708 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 SNX12Q9UMY4 172 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 ADGRL2O95490 1459 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 TBX3O15119 743 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 RTN2O75298 545 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 CDH3P22223 829 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 COX10Q12887 443 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 NME9Q86XW9 330 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 SUN5Q8TC36 379 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 ERP27Q96DN0 273 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 CLIP3Q96DZ5 547 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 OMA1Q96E52 524 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 LRRC1Q9BTT6 524 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 NLNQ9BYT8 704 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 H3BUI4 141 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 LYNP07948 512 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 PER3P56645 1201 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 CAMK2GQ13555 558 aaPredicted RBP9.19□□□□□ -0.94
CDH8-203ENST00000577390 ELOAQ14241 798 aaKnown RBP9.19□□□□□ -0.94
CDH8-203ENST00000577390 KLHL12Q53G59 568 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 MSANTD1Q6ZTZ1 278 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 FMR1NBQ8N0W7 255 aaPredicted RBP9.19□□□□□ -0.94
CDH8-203ENST00000577390 CEP95Q96GE4 821 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 IMPAD1Q9NX62 359 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 WDR62O43379 1518 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 K7ERI5 159 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 PIK3R2O00459 728 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 NUP107P57740 925 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 ZBED6P86452 979 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 NCAPHQ15003 741 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 RIMKLBQ9ULI2 386 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 ANKRD33BA6NCL7 494 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 FGFR1P11362 822 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 PRIM2P49643 509 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 PYHIN1Q6K0P9 492 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 MTSS1LQ765P7 747 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 FAM45AQ8TCE6 357 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 COMMD9Q9P000 198 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 ASXL3Q9C0F0 2248 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 PITPNM2Q9BZ72 1349 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 LINC00854A0A1B0GVQ3 168 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 OTOL1A6NHN0 477 aaPredicted RBP9.19□□□□□ -0.94
CDH8-203ENST00000577390 CCDC188H7C350 402 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 FGRP09769 529 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 UMPSP11172 480 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 CDH2P19022 906 aaPredicted RBP9.19□□□□□ -0.94
CDH8-203ENST00000577390 SLCO1A2P46721 670 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 USP46P62068 366 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 SLC39A14Q15043 492 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 DSG4Q86SJ6 1040 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 TC2NQ8N9U0 490 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 OTUD5Q96G74 571 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 PREBQ9HCU5 417 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 ATP8A2Q9NTI2 1148 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 MRGBPQ9NV56 204 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 LAMA4Q16363 1823 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 MYOM1P52179 1685 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 GOLGA8JA6NMD2 632 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 UBOX5O94941 541 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 BCAP31P51572 246 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 DR1Q01658 176 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 KCTD1Q719H9 257 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 LRRC70Q7Z2Q7 622 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 BEST2Q8NFU1 509 aa9.19□□□□□ -0.94
CDH8-203ENST00000577390 FAM83GA6ND36 823 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms