RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 LIN52Q52LA3 116 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 CDC42EP5Q6NZY7 148 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 TMEM270Q6UE05 265 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 CEP128Q6ZU80 1094 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 SLF2Q8IX21 1173 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 ZFAND2BQ8WV99 257 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 MKL1Q969V6 931 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 BICD1Q96G01 975 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 MPP4Q96JB8 637 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 SERAC1Q96JX3 654 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 TRAPPC9Q96Q05 1148 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 CLUHO75153 1309 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 IGLV3-22A0A075B6J6 115 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 LOC100653049A0A140TA62 436 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 E2F8A0AVK6 867 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 ZMPSTE24O75844 475 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 KRT34O76011 436 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 FAAP100Q0VG06 881 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 BMPR2Q13873 1038 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 ZC3H12AQ5D1E8 599 aaKnown RBP15.25■□□□□ 0.03
SCARF1-209ENST00000576012 C6orf163Q5TEZ5 329 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 BBOF1Q8ND07 529 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 CFAP36Q96G28 342 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 HIC2Q96JB3 615 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 MBOAT7Q96N66 472 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 FAM213AQ9BRX8 229 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 CYLDQ9NQC7 956 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 HOMER2Q9NSB8 354 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 PDP2Q9P2J9 529 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 TRPC5Q9UL62 973 aaPredicted RBP15.25■□□□□ 0.03
SCARF1-209ENST00000576012 AGTPBP1Q9UPW5 1226 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 IPO5O00410 1097 aaKnown RBP15.25■□□□□ 0.03
SCARF1-209ENST00000576012 TRAFD1O14545 582 aaPredicted RBP15.25■□□□□ 0.03
SCARF1-209ENST00000576012 ABLIM1O14639 778 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 TBX3O15119 743 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 LIASO43766 372 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 TNNI1P19237 187 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 KLF1Q13351 362 aaPredicted RBP15.25■□□□□ 0.03
SCARF1-209ENST00000576012 GRAMD1BQ3KR37 738 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 MIER3Q7Z3K6 550 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 SEPT12Q8IYM1 358 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 SMC1BQ8NDV3 1235 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 FBXL13Q8NEE6 735 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.25■□□□□ 0.03
SCARF1-209ENST00000576012 CRYGNQ8WXF5 182 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 DDX1Q92499 740 aaKnown RBP15.25■□□□□ 0.03
SCARF1-209ENST00000576012 SLCO2A1Q92959 643 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 TIPINQ9BVW5 301 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 SLC7A8Q9UHI5 535 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 ANGPTL2Q9UKU9 493 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 AK5Q9Y6K8 562 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 LAMB1P07942 1786 aa15.24■□□□□ 0.03
SCARF1-209ENST00000576012 ATP8B3O60423 1300 aa15.24■□□□□ 0.03
SCARF1-209ENST00000576012 MYH11P35749 1972 aa15.24■□□□□ 0.03
SCARF1-209ENST00000576012 PSMD10O75832 226 aa15.24■□□□□ 0.03
SCARF1-209ENST00000576012 PROSCO94903 275 aa15.24■□□□□ 0.03
SCARF1-209ENST00000576012 ECE1P42892 770 aa15.24■□□□□ 0.03
SCARF1-209ENST00000576012 SEZ6Q53EL9 994 aa15.24■□□□□ 0.03
SCARF1-209ENST00000576012 MMP19Q99542 508 aa15.24■□□□□ 0.03
SCARF1-209ENST00000576012 VCX3BQ9H321 246 aa15.24■□□□□ 0.03
SCARF1-209ENST00000576012 QTRT2Q9H974 415 aaKnown RBP15.24■□□□□ 0.03
SCARF1-209ENST00000576012 VCX3AQ9NNX9 186 aa15.24■□□□□ 0.03
SCARF1-209ENST00000576012 DMAP1Q9NPF5 467 aaPredicted RBP15.24■□□□□ 0.03
SCARF1-209ENST00000576012 RABGEF1Q9UJ41 708 aa15.24■□□□□ 0.03
SCARF1-209ENST00000576012 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.24■□□□□ 0.03
SCARF1-209ENST00000576012 PRR5-ARHGAP8B1AHC4 643 aa15.24■□□□□ 0.03
SCARF1-209ENST00000576012 F5H423 210 aaPredicted RBP15.24■□□□□ 0.03
SCARF1-209ENST00000576012 MTA2O94776 668 aa15.24■□□□□ 0.03
SCARF1-209ENST00000576012 GH2P01242 217 aa15.24■□□□□ 0.03
SCARF1-209ENST00000576012 RARBP10826 455 aa15.24■□□□□ 0.03
SCARF1-209ENST00000576012 AQP5P55064 265 aa15.24■□□□□ 0.03
SCARF1-209ENST00000576012 ARHGAP8P85298 464 aa15.24■□□□□ 0.03
SCARF1-209ENST00000576012 ASPHQ12797 758 aa15.24■□□□□ 0.03
SCARF1-209ENST00000576012 DYNC1I2Q13409 638 aaKnown RBP15.24■□□□□ 0.03
SCARF1-209ENST00000576012 NCOA4Q13772 614 aa15.24■□□□□ 0.03
SCARF1-209ENST00000576012 RALGPS1Q5JS13 557 aa15.24■□□□□ 0.03
SCARF1-209ENST00000576012 PAOXQ6QHF9 649 aa15.24■□□□□ 0.03
SCARF1-209ENST00000576012 CDHR3Q6ZTQ4 885 aa15.24■□□□□ 0.03
SCARF1-209ENST00000576012 SYDE1Q6ZW31 735 aaPredicted RBP15.24■□□□□ 0.03
SCARF1-209ENST00000576012 ULK2Q8IYT8 1036 aa15.24■□□□□ 0.03
SCARF1-209ENST00000576012 TRIM56Q9BRZ2 755 aaKnown RBP15.24■□□□□ 0.03
SCARF1-209ENST00000576012 RANBP17Q9H2T7 1088 aaKnown RBP15.24■□□□□ 0.03
SCARF1-209ENST00000576012 SMCHD1A6NHR9 2005 aa15.24■□□□□ 0.03
SCARF1-209ENST00000576012 DENND3A2RUS2 1198 aa15.23■□□□□ 0.03
SCARF1-209ENST00000576012 ADSSP30520 456 aa15.23■□□□□ 0.03
SCARF1-209ENST00000576012 JAG1P78504 1218 aa15.23■□□□□ 0.03
SCARF1-209ENST00000576012 CENPCQ03188 943 aa15.23■□□□□ 0.03
SCARF1-209ENST00000576012 PTK7Q13308 1070 aa15.23■□□□□ 0.03
SCARF1-209ENST00000576012 TCHHL1Q5QJ38 904 aaPredicted RBP15.23■□□□□ 0.03
SCARF1-209ENST00000576012 FAXCQ5TGI0 409 aa15.23■□□□□ 0.03
SCARF1-209ENST00000576012 SCARA3Q6AZY7 606 aa15.23■□□□□ 0.03
SCARF1-209ENST00000576012 DCUN1D2Q6PH85 259 aa15.23■□□□□ 0.03
SCARF1-209ENST00000576012 SPATA24Q86W54 205 aa15.23■□□□□ 0.03
SCARF1-209ENST00000576012 PPM1NQ8N819 430 aa15.23■□□□□ 0.03
SCARF1-209ENST00000576012 TTC25Q96NG3 672 aa15.23■□□□□ 0.03
SCARF1-209ENST00000576012 MCEEQ96PE7 176 aa15.23■□□□□ 0.03
SCARF1-209ENST00000576012 EBF4Q9BQW3 602 aa15.23■□□□□ 0.03
SCARF1-209ENST00000576012 CENPKQ9BS16 269 aa15.23■□□□□ 0.03
SCARF1-209ENST00000576012 TLE6Q9H808 572 aa15.23■□□□□ 0.03
SCARF1-209ENST00000576012 RREB1Q92766 1687 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms