RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 NEUROG3Q9Y4Z2 214 aa9.73□□□□□ -0.85
SMG6-218ENST00000575454 PCDHB5Q9Y5E4 795 aa9.73□□□□□ -0.85
SMG6-218ENST00000575454 PATJQ8NI35 1801 aa9.72□□□□□ -0.85
SMG6-218ENST00000575454 MIA3Q5JRA6 1907 aa9.72□□□□□ -0.85
SMG6-218ENST00000575454 MYH15Q9Y2K3 1946 aa9.72□□□□□ -0.85
SMG6-218ENST00000575454 OTOL1A6NHN0 477 aaPredicted RBP9.72□□□□□ -0.85
SMG6-218ENST00000575454 SRRM3A6NNA2 597 aaPredicted RBP9.72□□□□□ -0.85
SMG6-218ENST00000575454 H0Y626 953 aa9.72□□□□□ -0.85
SMG6-218ENST00000575454 PIRO00625 290 aa9.72□□□□□ -0.85
SMG6-218ENST00000575454 CYB561D2O14569 222 aa9.72□□□□□ -0.85
SMG6-218ENST00000575454 ALDH1A2O94788 518 aa9.72□□□□□ -0.85
SMG6-218ENST00000575454 TRIM16O95361 564 aa9.72□□□□□ -0.85
SMG6-218ENST00000575454 ARSAP15289 507 aa9.72□□□□□ -0.85
SMG6-218ENST00000575454 PRPHP41219 470 aa9.72□□□□□ -0.85
SMG6-218ENST00000575454 TSPY1Q01534 308 aa9.72□□□□□ -0.85
SMG6-218ENST00000575454 FAM160A1Q05DH4 1040 aa9.72□□□□□ -0.85
SMG6-218ENST00000575454 PSMD2Q13200 908 aa9.72□□□□□ -0.85
SMG6-218ENST00000575454 MTF1Q14872 753 aa9.72□□□□□ -0.85
SMG6-218ENST00000575454 TMEM132DQ14C87 1099 aa9.72□□□□□ -0.85
SMG6-218ENST00000575454 SPDYCQ5MJ68 293 aa9.72□□□□□ -0.85
SMG6-218ENST00000575454 LMBRD2Q68DH5 695 aaPredicted RBP9.72□□□□□ -0.85
SMG6-218ENST00000575454 TXNDC8Q6A555 127 aa9.72□□□□□ -0.85
SMG6-218ENST00000575454 LRSAM1Q6UWE0 723 aa9.72□□□□□ -0.85
SMG6-218ENST00000575454 FBXO18Q8NFZ0 1043 aa9.72□□□□□ -0.85
SMG6-218ENST00000575454 ZCCHC14Q8WYQ9 949 aaKnown RBP9.72□□□□□ -0.85
SMG6-218ENST00000575454 GATA6Q92908 595 aa9.72□□□□□ -0.85
SMG6-218ENST00000575454 FAM212AQ96EL1 285 aa9.72□□□□□ -0.85
SMG6-218ENST00000575454 CHFRQ96EP1 664 aa9.72□□□□□ -0.85
SMG6-218ENST00000575454 CNOT6LQ96LI5 555 aaKnown RBP9.72□□□□□ -0.85
SMG6-218ENST00000575454 MSTO1Q9BUK6 570 aa9.72□□□□□ -0.85
SMG6-218ENST00000575454 SCNM1Q9BWG6 230 aa9.72□□□□□ -0.85
SMG6-218ENST00000575454 TMEM121BQ9BXQ6 578 aaPredicted RBP9.72□□□□□ -0.85
SMG6-218ENST00000575454 NUSAP1Q9BXS6 441 aaKnown RBP9.72□□□□□ -0.85
SMG6-218ENST00000575454 ASB7Q9H672 318 aa9.72□□□□□ -0.85
SMG6-218ENST00000575454 FBRSL1Q9HCM7 1045 aaKnown RBP9.72□□□□□ -0.85
SMG6-218ENST00000575454 DUS2Q9NX74 493 aaKnown RBP9.72□□□□□ -0.85
SMG6-218ENST00000575454 ABI2Q9NYB9 513 aaPredicted RBP9.72□□□□□ -0.85
SMG6-218ENST00000575454 EVLQ9UI08 416 aaPredicted RBP9.72□□□□□ -0.85
SMG6-218ENST00000575454 C2CD2Q9Y426 696 aa9.72□□□□□ -0.85
SMG6-218ENST00000575454 FREM2Q5SZK8 3169 aa9.72□□□□□ -0.85
SMG6-218ENST00000575454 LAMA5O15230 3695 aa9.72□□□□□ -0.85
SMG6-218ENST00000575454 MTCL1Q9Y4B5 1905 aaKnown RBP9.72□□□□□ -0.85
SMG6-218ENST00000575454 NAV2Q8IVL1 2488 aa9.71□□□□□ -0.85
SMG6-218ENST00000575454 A0A0B4J269 797 aa9.71□□□□□ -0.86
SMG6-218ENST00000575454 ANO9A1A5B4 782 aa9.71□□□□□ -0.86
SMG6-218ENST00000575454 CDX4O14627 284 aaPredicted RBP9.71□□□□□ -0.86
SMG6-218ENST00000575454 PIGRP01833 764 aa9.71□□□□□ -0.86
SMG6-218ENST00000575454 USP17L7P0C7H9 530 aa9.71□□□□□ -0.86
SMG6-218ENST00000575454 HMGA1P17096 107 aaKnown RBP9.71□□□□□ -0.86
SMG6-218ENST00000575454 TNFSF9P41273 254 aa9.71□□□□□ -0.86
SMG6-218ENST00000575454 IFNAR2P48551 515 aa9.71□□□□□ -0.86
SMG6-218ENST00000575454 TAF6P49848 677 aa9.71□□□□□ -0.86
SMG6-218ENST00000575454 PDE6CP51160 858 aa9.71□□□□□ -0.86
SMG6-218ENST00000575454 GUCY2FP51841 1108 aa9.71□□□□□ -0.86
SMG6-218ENST00000575454 NCKAP1LP55160 1127 aa9.71□□□□□ -0.86
SMG6-218ENST00000575454 RPL10AP62906 217 aaKnown RBP9.71□□□□□ -0.86
SMG6-218ENST00000575454 HMGN5P82970 282 aaKnown RBP9.71□□□□□ -0.86
SMG6-218ENST00000575454 POU5F1Q01860 360 aaKnown RBP9.71□□□□□ -0.86
SMG6-218ENST00000575454 RAD51AP2Q09MP3 1159 aa9.71□□□□□ -0.86
SMG6-218ENST00000575454 BYSLQ13895 437 aaKnown RBP9.71□□□□□ -0.86
SMG6-218ENST00000575454 ZRSR1Q15695 479 aaKnown RBP9.71□□□□□ -0.86
SMG6-218ENST00000575454 UAP1L1Q3KQV9 507 aa9.71□□□□□ -0.86
SMG6-218ENST00000575454 JADE1Q6IE81 842 aa9.71□□□□□ -0.86
SMG6-218ENST00000575454 LPCAT2Q7L5N7 544 aa9.71□□□□□ -0.86
SMG6-218ENST00000575454 TMEM150AQ86TG1 271 aa9.71□□□□□ -0.86
SMG6-218ENST00000575454 SYT2Q8N9I0 419 aaPredicted RBP9.71□□□□□ -0.86
SMG6-218ENST00000575454 FSIP1Q8NA03 581 aa9.71□□□□□ -0.86
SMG6-218ENST00000575454 CDK5RAP3Q96JB5 506 aa9.71□□□□□ -0.86
SMG6-218ENST00000575454 PYM1Q9BRP8 204 aaKnown RBP9.71□□□□□ -0.86
SMG6-218ENST00000575454 CCSER1Q9C0I3 900 aa9.71□□□□□ -0.86
SMG6-218ENST00000575454 TMEM206Q9H813 350 aa9.71□□□□□ -0.86
SMG6-218ENST00000575454 ABCB6Q9NP58 842 aa9.71□□□□□ -0.86
SMG6-218ENST00000575454 CPSF3Q9UKF6 684 aaKnown RBP9.71□□□□□ -0.86
SMG6-218ENST00000575454 ODF2LQ9ULJ1 636 aa9.71□□□□□ -0.86
SMG6-218ENST00000575454 LHX6Q9UPM6 363 aa9.71□□□□□ -0.86
SMG6-218ENST00000575454 MSRB2Q9Y3D2 182 aa9.71□□□□□ -0.86
SMG6-218ENST00000575454 NOTCH4Q99466 2003 aa9.7□□□□□ -0.86
SMG6-218ENST00000575454 TRAV19A0A0A6YYK7 116 aa9.7□□□□□ -0.86
SMG6-218ENST00000575454 UPK3BL1B0FP48 263 aa9.7□□□□□ -0.86
SMG6-218ENST00000575454 UPK3BL2E5RIL1 263 aa9.7□□□□□ -0.86
SMG6-218ENST00000575454 TNFRSF10BO14763 440 aa9.7□□□□□ -0.86
SMG6-218ENST00000575454 PPEF2O14830 753 aa9.7□□□□□ -0.86
SMG6-218ENST00000575454 MAP3K13O43283 966 aa9.7□□□□□ -0.86
SMG6-218ENST00000575454 FAM189A1O60320 539 aa9.7□□□□□ -0.86
SMG6-218ENST00000575454 PRPF40AO75400 957 aaKnown RBP9.7□□□□□ -0.86
SMG6-218ENST00000575454 NFATC1O95644 943 aa9.7□□□□□ -0.86
SMG6-218ENST00000575454 CKMP06732 381 aa9.7□□□□□ -0.86
SMG6-218ENST00000575454 PLA2G4BP0C869 781 aa9.7□□□□□ -0.86
SMG6-218ENST00000575454 SPINK2P20155 84 aa9.7□□□□□ -0.86
SMG6-218ENST00000575454 U2AF2P26368 475 aaKnown RBP eCLIP9.7□□□□□ -0.862e-6■■□□□ 13.9
SMG6-218ENST00000575454 NMT1P30419 496 aaKnown RBP9.7□□□□□ -0.86
SMG6-218ENST00000575454 HOXD12P35452 270 aa9.7□□□□□ -0.86
SMG6-218ENST00000575454 PNPLA4P41247 253 aa9.7□□□□□ -0.86
SMG6-218ENST00000575454 NEK4P51957 841 aa9.7□□□□□ -0.86
SMG6-218ENST00000575454 IRX4P78413 519 aa9.7□□□□□ -0.86
SMG6-218ENST00000575454 HNRNPDQ14103 355 aaKnown RBP9.7□□□□□ -0.86
SMG6-218ENST00000575454 SV2CQ496J9 727 aa9.7□□□□□ -0.86
SMG6-218ENST00000575454 HSF5Q4G112 596 aaPredicted RBP9.7□□□□□ -0.86
SMG6-218ENST00000575454 HYIQ5T013 277 aa9.7□□□□□ -0.86
SMG6-218ENST00000575454 ANO7Q6IWH7 933 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms