RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 GUCY2DQ02846 1103 aa10.65□□□□□ -0.7
SMG6-213ENST00000573166 POU5F1BQ06416 359 aa10.65□□□□□ -0.7
SMG6-213ENST00000573166 C1orf228Q6PIY5 440 aa10.65□□□□□ -0.7
SMG6-213ENST00000573166 ANKRD7Q92527 254 aa10.65□□□□□ -0.7
SMG6-213ENST00000573166 RABEP2Q9H5N1 569 aa10.65□□□□□ -0.7
SMG6-213ENST00000573166 MINDY3Q9H8M7 445 aa10.65□□□□□ -0.7
SMG6-213ENST00000573166 METTL5Q9NRN9 209 aaKnown RBP10.65□□□□□ -0.7
SMG6-213ENST00000573166 A0A1B0GUA9 196 aa10.65□□□□□ -0.71
SMG6-213ENST00000573166 RPL9P32969 192 aaKnown RBP10.65□□□□□ -0.71
SMG6-213ENST00000573166 GHRHRQ02643 423 aa10.65□□□□□ -0.71
SMG6-213ENST00000573166 PRPSAP1Q14558 356 aa10.65□□□□□ -0.71
SMG6-213ENST00000573166 TRIM60Q495X7 471 aa10.65□□□□□ -0.71
SMG6-213ENST00000573166 E4F1Q66K89 784 aaPredicted RBP10.65□□□□□ -0.71
SMG6-213ENST00000573166 ARHGEF18Q6ZSZ5 1173 aa10.65□□□□□ -0.71
SMG6-213ENST00000573166 TMEM86AQ8N2M4 240 aa10.65□□□□□ -0.71
SMG6-213ENST00000573166 PPP1R14CQ8TAE6 165 aa10.65□□□□□ -0.71
SMG6-213ENST00000573166 SLC2A14Q8TDB8 520 aa10.65□□□□□ -0.71
SMG6-213ENST00000573166 SLC8A2Q9UPR5 921 aa10.65□□□□□ -0.71
SMG6-213ENST00000573166 MYH4Q9Y623 1939 aa10.65□□□□□ -0.71
SMG6-213ENST00000573166 COL4A5P29400 1685 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 ANO9A1A5B4 782 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 PI4K2BG5E9Z4 385 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 B4GALT4O60513 344 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 PIGHQ14442 188 aaPredicted RBP10.64□□□□□ -0.71
SMG6-213ENST00000573166 ZNF571Q7Z3V5 609 aaPredicted RBP10.64□□□□□ -0.71
SMG6-213ENST00000573166 MIB1Q86YT6 1006 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 YAF2Q8IY57 180 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 UROC1Q96N76 676 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 EPAS1Q99814 870 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 THAP2Q9H0W7 228 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 WNT8AQ9H1J5 351 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 TRIM10Q9UDY6 481 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 ECEL1O95672 775 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 SYN1P17600 705 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 BASP1P80723 227 aaKnown RBP10.64□□□□□ -0.71
SMG6-213ENST00000573166 BST2Q10589 180 aaKnown RBP10.64□□□□□ -0.71
SMG6-213ENST00000573166 SLC39A12Q504Y0 691 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 RNF219Q5W0B1 726 aaPredicted RBP10.64□□□□□ -0.71
SMG6-213ENST00000573166 FOXR2Q6PJQ5 311 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 FEZF2Q8TBJ5 459 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 MORC4Q8TE76 937 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 P3H4Q92791 437 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 EMID1Q96A84 441 aaPredicted RBP10.64□□□□□ -0.71
SMG6-213ENST00000573166 VPS37BQ9H9H4 285 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 ARHGAP20Q9P2F6 1191 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 MAD1L1Q9Y6D9 718 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 IRF1P10914 325 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 SLC1A1P43005 524 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 BRCC3P46736 316 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 TRIP13Q15645 432 aaPredicted RBP10.64□□□□□ -0.71
SMG6-213ENST00000573166 MIIPQ5JXC2 388 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 PHLDB3Q6NSJ2 640 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 EPM2AIP1Q7L775 607 aaPredicted RBP10.64□□□□□ -0.71
SMG6-213ENST00000573166 LRRC43Q8N309 656 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 MRPS31Q92665 395 aaKnown RBP10.64□□□□□ -0.71
SMG6-213ENST00000573166 RUNDC3BQ96NL0 473 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 ZNF518BQ9C0D4 1074 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 KLHL11Q9NVR0 708 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 DDIT4Q9NX09 232 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 SAGE1Q9NXZ1 904 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 TFR2Q9UP52 801 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 ADGRA3Q8IWK6 1321 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 ZMYM2Q9UBW7 1377 aa10.64□□□□□ -0.71
SMG6-213ENST00000573166 GOLGA6L7A0A1B0GV03 622 aa10.63□□□□□ -0.71
SMG6-213ENST00000573166 CARNS1A5YM72 827 aa10.63□□□□□ -0.71
SMG6-213ENST00000573166 H3BRJ5 948 aa10.63□□□□□ -0.71
SMG6-213ENST00000573166 CKMP06732 381 aa10.63□□□□□ -0.71
SMG6-213ENST00000573166 GZMAP12544 262 aa10.63□□□□□ -0.71
SMG6-213ENST00000573166 GPD1P21695 349 aa10.63□□□□□ -0.71
SMG6-213ENST00000573166 DCLRE1AQ6PJP8 1040 aa10.63□□□□□ -0.71
SMG6-213ENST00000573166 CAPN12Q6ZSI9 719 aa10.63□□□□□ -0.71
SMG6-213ENST00000573166 IRF2BP1Q8IU81 584 aa10.63□□□□□ -0.71
SMG6-213ENST00000573166 CTAGE3PQ8IX95 158 aa10.63□□□□□ -0.71
SMG6-213ENST00000573166 LRRC52Q8N7C0 313 aa10.63□□□□□ -0.71
SMG6-213ENST00000573166 DNAAF3Q8N9W5 541 aa10.63□□□□□ -0.71
SMG6-213ENST00000573166 MRPL17Q9NRX2 175 aaKnown RBP10.63□□□□□ -0.71
SMG6-213ENST00000573166 TUBGCP4Q9UGJ1 667 aa10.63□□□□□ -0.71
SMG6-213ENST00000573166 HPCAL4Q9UM19 191 aa10.63□□□□□ -0.71
SMG6-213ENST00000573166 OPA1O60313 960 aa10.63□□□□□ -0.71
SMG6-213ENST00000573166 SETSIPP0DME0 302 aa10.63□□□□□ -0.71
SMG6-213ENST00000573166 RRM1P23921 792 aa10.63□□□□□ -0.71
SMG6-213ENST00000573166 ARL1P40616 181 aaPredicted RBP10.63□□□□□ -0.71
SMG6-213ENST00000573166 TKTL1P51854 596 aa10.63□□□□□ -0.71
SMG6-213ENST00000573166 EPHB3P54753 998 aa10.63□□□□□ -0.71
SMG6-213ENST00000573166 FAM228AQ86W67 206 aa10.63□□□□□ -0.71
SMG6-213ENST00000573166 PALB2Q86YC2 1186 aa10.63□□□□□ -0.71
SMG6-213ENST00000573166 PALM2Q8IXS6 379 aa10.63□□□□□ -0.71
SMG6-213ENST00000573166 TTC13Q8NBP0 860 aa10.63□□□□□ -0.71
SMG6-213ENST00000573166 PAIP2Q9BPZ3 127 aaKnown RBP10.63□□□□□ -0.71
SMG6-213ENST00000573166 DDX56Q9NY93 547 aaKnown RBP10.63□□□□□ -0.71
SMG6-213ENST00000573166 TRPM5Q9NZQ8 1165 aa10.63□□□□□ -0.71
SMG6-213ENST00000573166 DPP7Q9UHL4 492 aa10.63□□□□□ -0.71
SMG6-213ENST00000573166 GJD2Q9UKL4 321 aa10.63□□□□□ -0.71
SMG6-213ENST00000573166 SIK3Q9Y2K2 1263 aa10.63□□□□□ -0.71
SMG6-213ENST00000573166 KAT6AQ92794 2004 aa10.63□□□□□ -0.71
SMG6-213ENST00000573166 CTIFO43310 598 aaKnown RBP10.63□□□□□ -0.71
SMG6-213ENST00000573166 ASS1P00966 412 aaKnown RBP10.63□□□□□ -0.71
SMG6-213ENST00000573166 BDNFP23560 247 aa10.63□□□□□ -0.71
SMG6-213ENST00000573166 PPM1AP35813 382 aa10.63□□□□□ -0.71
SMG6-213ENST00000573166 TPI1P60174 286 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms