RNA–Protein interactions for RNA: ENST00000572021.5

TRIM25-205, Transcript of tripartite motif containing 25, humanhuman

TSL 1 (best)

Gene TRIM25, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-205ENST00000572021 LRMPQ12912 555 aa12.73□□□□□ -0.37
TRIM25-205ENST00000572021 NCAPHQ15003 741 aa12.73□□□□□ -0.37
TRIM25-205ENST00000572021 PUS10Q3MIT2 529 aaKnown RBP12.73□□□□□ -0.37
TRIM25-205ENST00000572021 CT47A1Q5JQC4 288 aaPredicted RBP12.73□□□□□ -0.37
TRIM25-205ENST00000572021 INTS6LQ5JSJ4 861 aaKnown RBP12.73□□□□□ -0.37
TRIM25-205ENST00000572021 ELMSAN1Q6PJG2 1045 aa12.73□□□□□ -0.37
TRIM25-205ENST00000572021 DPH6Q7L8W6 267 aa12.73□□□□□ -0.37
TRIM25-205ENST00000572021 TCEAL8Q8IYN2 117 aa12.73□□□□□ -0.37
TRIM25-205ENST00000572021 HDAC7Q8WUI4 952 aa12.73□□□□□ -0.37
TRIM25-205ENST00000572021 ARID3AQ99856 593 aa12.73□□□□□ -0.37
TRIM25-205ENST00000572021 SYT15Q9BQS2 421 aa12.73□□□□□ -0.37
TRIM25-205ENST00000572021 ACBD6Q9BR61 282 aa12.73□□□□□ -0.37
TRIM25-205ENST00000572021 OXCT2Q9BYC2 517 aaPredicted RBP12.73□□□□□ -0.37
TRIM25-205ENST00000572021 IMPG2Q9BZV3 1241 aa12.73□□□□□ -0.37
TRIM25-205ENST00000572021 VRTNQ9H8Y1 702 aa12.73□□□□□ -0.37
TRIM25-205ENST00000572021 CRTAC1Q9NQ79 661 aa12.73□□□□□ -0.37
TRIM25-205ENST00000572021 SAMSN1Q9NSI8 373 aaKnown RBP12.73□□□□□ -0.37
TRIM25-205ENST00000572021 RAB20Q9NX57 234 aa12.73□□□□□ -0.37
TRIM25-205ENST00000572021 ZDHHC7Q9NXF8 308 aa12.73□□□□□ -0.37
TRIM25-205ENST00000572021 HMGXB4Q9UGU5 601 aa12.73□□□□□ -0.37
TRIM25-205ENST00000572021 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.73□□□□□ -0.37
TRIM25-205ENST00000572021 INSL5Q9Y5Q6 135 aa12.73□□□□□ -0.37
TRIM25-205ENST00000572021 A8MXQ7 604 aa12.72□□□□□ -0.37
TRIM25-205ENST00000572021 TACC1O75410 805 aa12.72□□□□□ -0.37
TRIM25-205ENST00000572021 C1RP00736 705 aa12.72□□□□□ -0.37
TRIM25-205ENST00000572021 CD58P19256 250 aa12.72□□□□□ -0.37
TRIM25-205ENST00000572021 MTIF2P46199 727 aaKnown RBP12.72□□□□□ -0.37
TRIM25-205ENST00000572021 MARSP56192 900 aaKnown RBP12.72□□□□□ -0.37
TRIM25-205ENST00000572021 MYL5Q02045 173 aa12.72□□□□□ -0.37
TRIM25-205ENST00000572021 ATAT1Q5SQI0 421 aa12.72□□□□□ -0.37
TRIM25-205ENST00000572021 CCDC149Q6ZUS6 474 aa12.72□□□□□ -0.37
TRIM25-205ENST00000572021 GRASPQ7Z6J2 395 aaPredicted RBP12.72□□□□□ -0.37
TRIM25-205ENST00000572021 DCP1BQ8IZD4 617 aaKnown RBP12.72□□□□□ -0.37
TRIM25-205ENST00000572021 STKLD1Q8NE28 680 aa12.72□□□□□ -0.37
TRIM25-205ENST00000572021 CMASQ8NFW8 434 aaPredicted RBP12.72□□□□□ -0.37
TRIM25-205ENST00000572021 GPR152Q8TDT2 470 aa12.72□□□□□ -0.37
TRIM25-205ENST00000572021 RPGRIP1Q96KN7 1286 aa12.72□□□□□ -0.37
TRIM25-205ENST00000572021 RIPOR3Q96MK2 946 aa12.72□□□□□ -0.37
TRIM25-205ENST00000572021 PKMYT1Q99640 499 aa12.72□□□□□ -0.37
TRIM25-205ENST00000572021 SEPT5Q99719 369 aaPredicted RBP12.72□□□□□ -0.37
TRIM25-205ENST00000572021 FAM50BQ9Y247 325 aa12.72□□□□□ -0.37
TRIM25-205ENST00000572021 NFE2L3Q9Y4A8 694 aa12.72□□□□□ -0.37
TRIM25-205ENST00000572021 YIPF1Q9Y548 306 aa12.72□□□□□ -0.37
TRIM25-205ENST00000572021 DENND4AQ7Z401 1863 aa12.71□□□□□ -0.37
TRIM25-205ENST00000572021 LRG1P02750 347 aa12.71□□□□□ -0.37
TRIM25-205ENST00000572021 AFPP02771 609 aaKnown RBP12.71□□□□□ -0.37
TRIM25-205ENST00000572021 P4HA1P13674 534 aa12.71□□□□□ -0.37
TRIM25-205ENST00000572021 CYP2F1P24903 491 aa12.71□□□□□ -0.37
TRIM25-205ENST00000572021 PCSK1P29120 753 aa12.71□□□□□ -0.37
TRIM25-205ENST00000572021 MTHFRP42898 656 aa12.71□□□□□ -0.37
TRIM25-205ENST00000572021 GPR15P49685 360 aa12.71□□□□□ -0.37
TRIM25-205ENST00000572021 MGAT5BQ3V5L5 792 aa12.71□□□□□ -0.37
TRIM25-205ENST00000572021 MDH1BQ5I0G3 518 aa12.71□□□□□ -0.37
TRIM25-205ENST00000572021 SDHAF4Q5VUM1 108 aa12.71□□□□□ -0.37
TRIM25-205ENST00000572021 CCDC150Q8NCX0 1101 aa12.71□□□□□ -0.37
TRIM25-205ENST00000572021 TAF4BQ92750 862 aa12.71□□□□□ -0.37
TRIM25-205ENST00000572021 NIF3L1Q9GZT8 377 aa12.71□□□□□ -0.37
TRIM25-205ENST00000572021 THAP9Q9H5L6 903 aa12.71□□□□□ -0.37
TRIM25-205ENST00000572021 CD320Q9NPF0 282 aa12.71□□□□□ -0.37
TRIM25-205ENST00000572021 CEP72Q9P209 647 aa12.71□□□□□ -0.37
TRIM25-205ENST00000572021 CDH9Q9ULB4 789 aa12.71□□□□□ -0.37
TRIM25-205ENST00000572021 COQ4Q9Y3A0 265 aa12.71□□□□□ -0.37
TRIM25-205ENST00000572021 NOTCH4Q99466 2003 aa12.71□□□□□ -0.38
TRIM25-205ENST00000572021 XYLBO75191 536 aa12.7□□□□□ -0.38
TRIM25-205ENST00000572021 HNRNPA1P09651 372 aaKnown RBP eCLIP12.7□□□□□ -0.38
TRIM25-205ENST00000572021 PTPN1P18031 435 aaKnown RBP12.7□□□□□ -0.38
TRIM25-205ENST00000572021 NDST1P52848 882 aa12.7□□□□□ -0.38
TRIM25-205ENST00000572021 CYP27A1Q02318 531 aa12.7□□□□□ -0.38
TRIM25-205ENST00000572021 ZP2Q05996 745 aa12.7□□□□□ -0.38
TRIM25-205ENST00000572021 WDR44Q5JSH3 913 aa12.7□□□□□ -0.38
TRIM25-205ENST00000572021 ACOT1Q86TX2 421 aa12.7□□□□□ -0.38
TRIM25-205ENST00000572021 HS6ST3Q8IZP7 471 aa12.7□□□□□ -0.38
TRIM25-205ENST00000572021 ST13P5Q8NFI4 369 aaPredicted RBP12.7□□□□□ -0.38
TRIM25-205ENST00000572021 GIPC2Q8TF65 315 aa12.7□□□□□ -0.38
TRIM25-205ENST00000572021 MYLPFQ96A32 169 aa12.7□□□□□ -0.38
TRIM25-205ENST00000572021 TWNKQ96RR1 684 aa12.7□□□□□ -0.38
TRIM25-205ENST00000572021 UHRF1Q96T88 793 aaPredicted RBP12.7□□□□□ -0.38
TRIM25-205ENST00000572021 CORO1BQ9BR76 489 aa12.7□□□□□ -0.38
TRIM25-205ENST00000572021 CRACR2AQ9BSW2 395 aa12.7□□□□□ -0.38
TRIM25-205ENST00000572021 BCO2Q9BYV7 579 aa12.7□□□□□ -0.38
TRIM25-205ENST00000572021 DNMT3BQ9UBC3 853 aaKnown RBP12.7□□□□□ -0.38
TRIM25-205ENST00000572021 PCDHB5Q9Y5E4 795 aa12.7□□□□□ -0.38
TRIM25-205ENST00000572021 KCNJ18B7U540 433 aa12.69□□□□□ -0.38
TRIM25-205ENST00000572021 CLDN5O00501 218 aa12.69□□□□□ -0.38
TRIM25-205ENST00000572021 NRG2O14511 850 aaPredicted RBP12.69□□□□□ -0.38
TRIM25-205ENST00000572021 N4BP1O75113 896 aaKnown RBP12.69□□□□□ -0.38
TRIM25-205ENST00000572021 ATF6P18850 670 aa12.69□□□□□ -0.38
TRIM25-205ENST00000572021 HOXA9P31269 272 aa12.69□□□□□ -0.38
TRIM25-205ENST00000572021 SSTR3P32745 418 aaPredicted RBP12.69□□□□□ -0.38
TRIM25-205ENST00000572021 APBA1Q02410 837 aa12.69□□□□□ -0.38
TRIM25-205ENST00000572021 KCNJ12Q14500 433 aa12.69□□□□□ -0.38
TRIM25-205ENST00000572021 ZNF394Q53GI3 561 aa12.69□□□□□ -0.38
TRIM25-205ENST00000572021 FAM171BQ6P995 826 aa12.69□□□□□ -0.38
TRIM25-205ENST00000572021 GET4Q7L5D6 327 aaPredicted RBP12.69□□□□□ -0.38
TRIM25-205ENST00000572021 SPATA2LQ8IUW3 424 aaPredicted RBP12.69□□□□□ -0.38
TRIM25-205ENST00000572021 ADHFE1Q8IWW8 467 aa12.69□□□□□ -0.38
TRIM25-205ENST00000572021 SPC24Q8NBT2 197 aa12.69□□□□□ -0.38
TRIM25-205ENST00000572021 B3GALNT2Q8NCR0 500 aa12.69□□□□□ -0.38
TRIM25-205ENST00000572021 SPATA18Q8TC71 538 aa12.69□□□□□ -0.38
TRIM25-205ENST00000572021 ENOX1Q8TC92 643 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms