RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 NTRK1P04629 796 aa6.87□□□□□ -1.31
UBFD1-209ENST00000569919 AMY2AP04746 511 aa6.87□□□□□ -1.31
UBFD1-209ENST00000569919 LINC00271P0C7V0 271 aa6.87□□□□□ -1.31
UBFD1-209ENST00000569919 TGFB3P10600 412 aa6.87□□□□□ -1.31
UBFD1-209ENST00000569919 TOP1P11387 765 aaKnown RBP6.87□□□□□ -1.31
UBFD1-209ENST00000569919 RAC2P15153 192 aa6.87□□□□□ -1.31
UBFD1-209ENST00000569919 AMY2BP19961 511 aa6.87□□□□□ -1.31
UBFD1-209ENST00000569919 NRIP1P48552 1158 aa6.87□□□□□ -1.31
UBFD1-209ENST00000569919 CAMK1Q14012 370 aa6.87□□□□□ -1.31
UBFD1-209ENST00000569919 STAT4Q14765 748 aa6.87□□□□□ -1.31
UBFD1-209ENST00000569919 GPR19Q15760 415 aa6.87□□□□□ -1.31
UBFD1-209ENST00000569919 ARHGEF16Q5VV41 709 aa6.87□□□□□ -1.31
UBFD1-209ENST00000569919 BICRALQ6AI39 1079 aa6.87□□□□□ -1.31
UBFD1-209ENST00000569919 ARHGAP36Q6ZRI8 547 aa6.87□□□□□ -1.31
UBFD1-209ENST00000569919 NLRX1Q86UT6 975 aa6.87□□□□□ -1.31
UBFD1-209ENST00000569919 FERMT3Q86UX7 667 aa6.87□□□□□ -1.31
UBFD1-209ENST00000569919 UBALD2Q8IYN6 164 aa6.87□□□□□ -1.31
UBFD1-209ENST00000569919 PIP4K2CQ8TBX8 421 aa6.87□□□□□ -1.31
UBFD1-209ENST00000569919 SPPL3Q8TCT6 385 aa6.87□□□□□ -1.31
UBFD1-209ENST00000569919 ZNF689Q96CS4 500 aaPredicted RBP6.87□□□□□ -1.31
UBFD1-209ENST00000569919 TTC14Q96N46 770 aa6.87□□□□□ -1.31
UBFD1-209ENST00000569919 RMDN3Q96TC7 470 aa6.87□□□□□ -1.31
UBFD1-209ENST00000569919 RNPEPQ9H4A4 650 aa6.87□□□□□ -1.31
UBFD1-209ENST00000569919 TLE6Q9H808 572 aa6.87□□□□□ -1.31
UBFD1-209ENST00000569919 SMURF1Q9HCE7 757 aa6.87□□□□□ -1.31
UBFD1-209ENST00000569919 INCENPQ9NQS7 918 aa6.87□□□□□ -1.31
UBFD1-209ENST00000569919 ECHDC1Q9NTX5 307 aa6.87□□□□□ -1.31
UBFD1-209ENST00000569919 CTNND2Q9UQB3 1225 aa6.87□□□□□ -1.31
UBFD1-209ENST00000569919 LCTP09848 1927 aa6.87□□□□□ -1.31
UBFD1-209ENST00000569919 RALGAPA2Q2PPJ7 1873 aa6.87□□□□□ -1.31
UBFD1-209ENST00000569919 MYO7AQ13402 2215 aa6.86□□□□□ -1.31
UBFD1-209ENST00000569919 NLRC5Q86WI3 1866 aa6.86□□□□□ -1.31
UBFD1-209ENST00000569919 KMT2EQ8IZD2 1858 aa6.86□□□□□ -1.31
UBFD1-209ENST00000569919 FRMPD2Q68DX3 1309 aaPredicted RBP6.86□□□□□ -1.31
UBFD1-209ENST00000569919 ADGRA3Q8IWK6 1321 aa6.86□□□□□ -1.31
UBFD1-209ENST00000569919 GPR39O43194 453 aa6.86□□□□□ -1.31
UBFD1-209ENST00000569919 FKBP9O95302 570 aa6.86□□□□□ -1.31
UBFD1-209ENST00000569919 ITGB1P05556 798 aa6.86□□□□□ -1.31
UBFD1-209ENST00000569919 PDGFRBP09619 1106 aa6.86□□□□□ -1.31
UBFD1-209ENST00000569919 ZNF286BP0CG31 522 aa6.86□□□□□ -1.31
UBFD1-209ENST00000569919 PMLP29590 882 aa6.86□□□□□ -1.31
UBFD1-209ENST00000569919 HOXC8P31273 242 aa6.86□□□□□ -1.31
UBFD1-209ENST00000569919 GALK1P51570 392 aa6.86□□□□□ -1.31
UBFD1-209ENST00000569919 CLCN5P51795 746 aa6.86□□□□□ -1.31
UBFD1-209ENST00000569919 IL2P60568 153 aa6.86□□□□□ -1.31
UBFD1-209ENST00000569919 ARHGAP44Q17R89 818 aa6.86□□□□□ -1.31
UBFD1-209ENST00000569919 ZMYM1Q5SVZ6 1142 aa6.86□□□□□ -1.31
UBFD1-209ENST00000569919 CELF3Q5SZQ8 465 aaKnown RBP6.86□□□□□ -1.31
UBFD1-209ENST00000569919 GPATCH4Q5T3I0 446 aaKnown RBP6.86□□□□□ -1.31
UBFD1-209ENST00000569919 RNF219Q5W0B1 726 aaPredicted RBP6.86□□□□□ -1.31
UBFD1-209ENST00000569919 FKBP9P1Q75LS8 142 aa6.86□□□□□ -1.31
UBFD1-209ENST00000569919 RBM23Q86U06 439 aaKnown RBP6.86□□□□□ -1.31
UBFD1-209ENST00000569919 SIRT2Q8IXJ6 389 aa6.86□□□□□ -1.31
UBFD1-209ENST00000569919 LILRA2Q8N149 483 aa6.86□□□□□ -1.31
UBFD1-209ENST00000569919 SUSD6Q92537 303 aa6.86□□□□□ -1.31
UBFD1-209ENST00000569919 TBC1D5Q92609 795 aa6.86□□□□□ -1.31
UBFD1-209ENST00000569919 SPATA33Q96N06 139 aa6.86□□□□□ -1.31
UBFD1-209ENST00000569919 CDCA3Q99618 268 aaPredicted RBP6.86□□□□□ -1.31
UBFD1-209ENST00000569919 TMEM47Q9BQJ4 181 aa6.86□□□□□ -1.31
UBFD1-209ENST00000569919 C16orf70Q9BSU1 422 aa6.86□□□□□ -1.31
UBFD1-209ENST00000569919 SEMA4AQ9H3S1 761 aa6.86□□□□□ -1.31
UBFD1-209ENST00000569919 CHMP4BQ9H444 224 aaKnown RBP6.86□□□□□ -1.31
UBFD1-209ENST00000569919 MLXIPQ9HAP2 919 aa6.86□□□□□ -1.31
UBFD1-209ENST00000569919 SLC6A20Q9NP91 592 aa6.86□□□□□ -1.31
UBFD1-209ENST00000569919 TCP11L1Q9NUJ3 509 aa6.86□□□□□ -1.31
UBFD1-209ENST00000569919 THG1LQ9NWX6 298 aaKnown RBP6.86□□□□□ -1.31
UBFD1-209ENST00000569919 MAP3K20Q9NYL2 800 aaKnown RBP6.86□□□□□ -1.31
UBFD1-209ENST00000569919 BARX2Q9UMQ3 279 aaPredicted RBP6.86□□□□□ -1.31
UBFD1-209ENST00000569919 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.86□□□□□ -1.31
UBFD1-209ENST00000569919 PLXNA3P51805 1871 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 CFAP54Q96N23 3096 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 ABCB11O95342 1321 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 SLC12A8A0AV02 714 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 KRIT1O00522 736 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 KCNK3O14649 394 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 HYAL3O43820 417 aaPredicted RBP6.85□□□□□ -1.31
UBFD1-209ENST00000569919 ORC4O43929 436 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 PDGFBP01127 241 aaPredicted RBP6.85□□□□□ -1.31
UBFD1-209ENST00000569919 STAG3L1P0CL83 205 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 SRGAP2BP0DMP2 458 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 SMIM10L2AP0DMW4 78 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 SMIM10L2BP0DMW5 78 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 GLI4P10075 376 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 HSPD1P10809 573 aaKnown RBP6.85□□□□□ -1.31
UBFD1-209ENST00000569919 PDHBP11177 359 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 GUCY2FP51841 1108 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 UBE3AQ05086 875 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 ZNF543Q08ER8 600 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 PLEKHG6Q3KR16 790 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 HSDL1Q3SXM5 330 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 USH1GQ495M9 461 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 TMEM184AQ6ZMB5 413 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 DGLUCYQ7Z3D6 616 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 FRMD5Q7Z6J6 570 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 ADGRD2Q7Z7M1 963 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 RSPH3Q86UC2 560 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 CABP7Q86V35 215 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 PTRH1Q86Y79 214 aaKnown RBP6.85□□□□□ -1.31
UBFD1-209ENST00000569919 CMTR2Q8IYT2 770 aaKnown RBP6.85□□□□□ -1.31
UBFD1-209ENST00000569919 SH3RF2Q8TEC5 729 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms