RNA–Protein interactions for RNA: ENST00000569606.1

EDC3-217, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-217ENST00000569606 PKMYT1Q99640 499 aa13.29□□□□□ -0.28
EDC3-217ENST00000569606 ZBP1Q9H171 429 aa13.29□□□□□ -0.28
EDC3-217ENST00000569606 NKX2-4Q9H2Z4 354 aa13.29□□□□□ -0.28
EDC3-217ENST00000569606 STK39Q9UEW8 545 aa13.29□□□□□ -0.28
EDC3-217ENST00000569606 PUF60Q9UHX1 559 aaKnown RBP13.29□□□□□ -0.28
EDC3-217ENST00000569606 MSRAQ9UJ68 235 aa13.29□□□□□ -0.28
EDC3-217ENST00000569606 PTPRDP23468 1912 aa13.29□□□□□ -0.28
EDC3-217ENST00000569606 MYBPHLA2RUH7 354 aa13.28□□□□□ -0.28
EDC3-217ENST00000569606 OR6C75A6NL08 312 aa13.28□□□□□ -0.28
EDC3-217ENST00000569606 DDX3XO00571 662 aaKnown RBP eCLIP13.28□□□□□ -0.28
EDC3-217ENST00000569606 MED7O43513 233 aa13.28□□□□□ -0.28
EDC3-217ENST00000569606 CFHP08603 1231 aa13.28□□□□□ -0.28
EDC3-217ENST00000569606 TNFAIP3P21580 790 aa13.28□□□□□ -0.28
EDC3-217ENST00000569606 ANXA13P27216 316 aa13.28□□□□□ -0.28
EDC3-217ENST00000569606 TSPY1Q01534 308 aa13.28□□□□□ -0.28
EDC3-217ENST00000569606 DSG1Q02413 1049 aa13.28□□□□□ -0.28
EDC3-217ENST00000569606 BMS1Q14692 1282 aaKnown RBP13.28□□□□□ -0.28
EDC3-217ENST00000569606 MTF1Q14872 753 aa13.28□□□□□ -0.28
EDC3-217ENST00000569606 STILQ15468 1287 aa13.28□□□□□ -0.28
EDC3-217ENST00000569606 CNGA2Q16280 664 aa13.28□□□□□ -0.28
EDC3-217ENST00000569606 CTXN3Q4LDR2 81 aa13.28□□□□□ -0.28
EDC3-217ENST00000569606 MDH1BQ5I0G3 518 aa13.28□□□□□ -0.28
EDC3-217ENST00000569606 PPP1R26Q5T8A7 1209 aaPredicted RBP13.28□□□□□ -0.28
EDC3-217ENST00000569606 KIAA1841Q6NSI8 718 aa13.28□□□□□ -0.28
EDC3-217ENST00000569606 FAM171BQ6P995 826 aa13.28□□□□□ -0.28
EDC3-217ENST00000569606 LRRTM3Q86VH5 581 aa13.28□□□□□ -0.28
EDC3-217ENST00000569606 CCDC170Q8IYT3 715 aa13.28□□□□□ -0.28
EDC3-217ENST00000569606 SLC30A5Q8TAD4 765 aa13.28□□□□□ -0.28
EDC3-217ENST00000569606 SPPL3Q8TCT6 385 aa13.28□□□□□ -0.28
EDC3-217ENST00000569606 RIN2Q8WYP3 895 aaPredicted RBP13.28□□□□□ -0.28
EDC3-217ENST00000569606 CYFIP2Q96F07 1278 aa13.28□□□□□ -0.28
EDC3-217ENST00000569606 CCDC42Q96M95 316 aa13.28□□□□□ -0.28
EDC3-217ENST00000569606 PCDHB18PQ96TA0 734 aa13.28□□□□□ -0.28
EDC3-217ENST00000569606 OXCT2Q9BYC2 517 aaPredicted RBP13.28□□□□□ -0.28
EDC3-217ENST00000569606 ZCWPW1Q9H0M4 648 aa13.28□□□□□ -0.28
EDC3-217ENST00000569606 ALG13Q9NP73 1137 aaKnown RBP13.28□□□□□ -0.28
EDC3-217ENST00000569606 FAM49BQ9NUQ9 324 aa13.28□□□□□ -0.28
EDC3-217ENST00000569606 MTRRQ9UBK8 725 aa13.28□□□□□ -0.28
EDC3-217ENST00000569606 GTF3C4Q9UKN8 822 aa13.28□□□□□ -0.28
EDC3-217ENST00000569606 PCDHGC3Q9UN70 934 aa13.28□□□□□ -0.28
EDC3-217ENST00000569606 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.28□□□□□ -0.28
EDC3-217ENST00000569606 LZTS1Q9Y250 596 aa13.28□□□□□ -0.28
EDC3-217ENST00000569606 BACE2Q9Y5Z0 518 aa13.28□□□□□ -0.28
EDC3-217ENST00000569606 PDE4DIPQ5VU43 2346 aa13.27□□□□□ -0.28
EDC3-217ENST00000569606 A0A087X0T9 212 aa13.27□□□□□ -0.29
EDC3-217ENST00000569606 C2CD2LO14523 706 aa13.27□□□□□ -0.29
EDC3-217ENST00000569606 ARHGAP6O43182 974 aa13.27□□□□□ -0.29
EDC3-217ENST00000569606 NRDCO43847 1150 aa13.27□□□□□ -0.29
EDC3-217ENST00000569606 MICAL2O94851 1124 aa13.27□□□□□ -0.29
EDC3-217ENST00000569606 URODP06132 367 aa13.27□□□□□ -0.29
EDC3-217ENST00000569606 OR4Q2P0C623 313 aa13.27□□□□□ -0.29
EDC3-217ENST00000569606 FAM228BP0C875 321 aa13.27□□□□□ -0.29
EDC3-217ENST00000569606 CTSAP10619 480 aa13.27□□□□□ -0.29
EDC3-217ENST00000569606 CCDC130P13994 396 aa13.27□□□□□ -0.29
EDC3-217ENST00000569606 SSTR3P32745 418 aaPredicted RBP13.27□□□□□ -0.29
EDC3-217ENST00000569606 CYLC1P35663 651 aaPredicted RBP13.27□□□□□ -0.29
EDC3-217ENST00000569606 KIF11P52732 1056 aa13.27□□□□□ -0.29
EDC3-217ENST00000569606 SMAD3P84022 425 aaKnown RBP13.27□□□□□ -0.29
EDC3-217ENST00000569606 UBE3AQ05086 875 aa13.27□□□□□ -0.29
EDC3-217ENST00000569606 PSMD5Q16401 504 aa13.27□□□□□ -0.29
EDC3-217ENST00000569606 RSPO2Q6UXX9 243 aaPredicted RBP13.27□□□□□ -0.29
EDC3-217ENST00000569606 PAQR9Q6ZVX9 377 aa13.27□□□□□ -0.29
EDC3-217ENST00000569606 VPS36Q86VN1 386 aa13.27□□□□□ -0.29
EDC3-217ENST00000569606 PALB2Q86YC2 1186 aa13.27□□□□□ -0.29
EDC3-217ENST00000569606 GLYCTKQ8IVS8 523 aa13.27□□□□□ -0.29
EDC3-217ENST00000569606 GPR65Q8IYL9 337 aa13.27□□□□□ -0.29
EDC3-217ENST00000569606 MYCBPAPQ8TBZ2 947 aa13.27□□□□□ -0.29
EDC3-217ENST00000569606 MYLPFQ96A32 169 aa13.27□□□□□ -0.29
EDC3-217ENST00000569606 PCED1BQ96HM7 432 aa13.27□□□□□ -0.29
EDC3-217ENST00000569606 HNRNPABQ99729 332 aaKnown RBP13.27□□□□□ -0.29
EDC3-217ENST00000569606 C11orf84Q9BUA3 381 aaPredicted RBP13.27□□□□□ -0.29
EDC3-217ENST00000569606 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.27□□□□□ -0.29
EDC3-217ENST00000569606 B3GNT5Q9BYG0 378 aa13.27□□□□□ -0.29
EDC3-217ENST00000569606 DEF6Q9H4E7 631 aa13.27□□□□□ -0.29
EDC3-217ENST00000569606 TMLHEQ9NVH6 421 aa13.27□□□□□ -0.29
EDC3-217ENST00000569606 ADAMTS1Q9UHI8 967 aa13.27□□□□□ -0.29
EDC3-217ENST00000569606 TSPAN16Q9UKR8 245 aa13.27□□□□□ -0.29
EDC3-217ENST00000569606 MTUS1Q9ULD2 1270 aa13.27□□□□□ -0.29
EDC3-217ENST00000569606 NENFQ9UMX5 172 aa13.27□□□□□ -0.29
EDC3-217ENST00000569606 ZNF263O14978 683 aa13.26□□□□□ -0.29
EDC3-217ENST00000569606 GRM6O15303 877 aa13.26□□□□□ -0.29
EDC3-217ENST00000569606 AKR1B10O60218 316 aa13.26□□□□□ -0.29
EDC3-217ENST00000569606 LILRB3O75022 631 aa13.26□□□□□ -0.29
EDC3-217ENST00000569606 NDUFA10O95299 355 aa13.26□□□□□ -0.29
EDC3-217ENST00000569606 CYP1A1P04798 512 aaPredicted RBP13.26□□□□□ -0.29
EDC3-217ENST00000569606 DNAJB1P25685 340 aa13.26□□□□□ -0.29
EDC3-217ENST00000569606 DNAJB2P25686 324 aa13.26□□□□□ -0.29
EDC3-217ENST00000569606 CDH5P33151 784 aaPredicted RBP13.26□□□□□ -0.29
EDC3-217ENST00000569606 GFPT1Q06210 699 aaPredicted RBP13.26□□□□□ -0.29
EDC3-217ENST00000569606 PTPN14Q15678 1187 aa13.26□□□□□ -0.29
EDC3-217ENST00000569606 MAPRE1Q15691 268 aaKnown RBP13.26□□□□□ -0.29
EDC3-217ENST00000569606 SLC18A3Q16572 532 aa13.26□□□□□ -0.29
EDC3-217ENST00000569606 GOLGA7BQ2TAP0 167 aa13.26□□□□□ -0.29
EDC3-217ENST00000569606 ATG2AQ2TAZ0 1938 aa13.26□□□□□ -0.29
EDC3-217ENST00000569606 PKDCCQ504Y2 493 aa13.26□□□□□ -0.29
EDC3-217ENST00000569606 HS1BP3Q53T59 392 aa13.26□□□□□ -0.29
EDC3-217ENST00000569606 PPP2R2DQ66LE6 453 aa13.26□□□□□ -0.29
EDC3-217ENST00000569606 SLC8B1Q6J4K2 584 aa13.26□□□□□ -0.29
EDC3-217ENST00000569606 DENND1BQ6P3S1 775 aa13.26□□□□□ -0.29
EDC3-217ENST00000569606 LCLAT1Q6UWP7 414 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms