RNA–Protein interactions for RNA: ENST00000569406.5

CLK3-226, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 3,591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-226ENST00000569406 TAF12Q16514 161 aa11.36□□□□□ -0.59
CLK3-226ENST00000569406 IGSF11Q5DX21 431 aa11.36□□□□□ -0.59
CLK3-226ENST00000569406 DCDC5Q6ZRR9 648 aa11.36□□□□□ -0.59
CLK3-226ENST00000569406 KIAA2013Q8IYS2 634 aa11.36□□□□□ -0.59
CLK3-226ENST00000569406 LILRB2Q8N423 598 aa11.36□□□□□ -0.59
CLK3-226ENST00000569406 CSGALNACT2Q8N6G5 542 aa11.36□□□□□ -0.59
CLK3-226ENST00000569406 HAS1Q92839 578 aa11.36□□□□□ -0.59
CLK3-226ENST00000569406 COA1Q9GZY4 146 aa11.36□□□□□ -0.59
CLK3-226ENST00000569406 QTRT2Q9H974 415 aaKnown RBP11.36□□□□□ -0.59
CLK3-226ENST00000569406 PCDHA13Q9Y5I0 950 aa11.36□□□□□ -0.59
CLK3-226ENST00000569406 SNTNA6NMZ2 147 aa11.36□□□□□ -0.59
CLK3-226ENST00000569406 CCNT1O60563 726 aaKnown RBP11.36□□□□□ -0.59
CLK3-226ENST00000569406 TDP2O95551 362 aa11.36□□□□□ -0.59
CLK3-226ENST00000569406 PTPN4P29074 926 aa11.36□□□□□ -0.59
CLK3-226ENST00000569406 RFC1P35251 1148 aaPredicted RBP11.36□□□□□ -0.59
CLK3-226ENST00000569406 PSMD6Q15008 389 aa11.36□□□□□ -0.59
CLK3-226ENST00000569406 C10orf76Q5T2E6 689 aa11.36□□□□□ -0.59
CLK3-226ENST00000569406 EGFLAMQ63HQ2 1017 aa11.36□□□□□ -0.59
CLK3-226ENST00000569406 RNF43Q68DV7 783 aa11.36□□□□□ -0.59
CLK3-226ENST00000569406 TTC23LQ6PF05 361 aa11.36□□□□□ -0.59
CLK3-226ENST00000569406 Q8N9G6 341 aaPredicted RBP11.36□□□□□ -0.59
CLK3-226ENST00000569406 GJA10Q969M2 543 aa11.36□□□□□ -0.59
CLK3-226ENST00000569406 PURBQ96QR8 312 aaKnown RBP11.36□□□□□ -0.59
CLK3-226ENST00000569406 DDX47Q9H0S4 455 aaKnown RBP11.36□□□□□ -0.59
CLK3-226ENST00000569406 OLFML3Q9NRN5 406 aa11.36□□□□□ -0.59
CLK3-226ENST00000569406 THAP1Q9NVV9 213 aa11.36□□□□□ -0.59
CLK3-226ENST00000569406 DMTF1Q9Y222 760 aa11.36□□□□□ -0.59
CLK3-226ENST00000569406 PCNTO95613 3336 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 H3BSA7 217 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 H7C0C1 242 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 MAPK13O15264 365 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 GABBR2O75899 941 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 CAPN1P07384 714 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 OR52Z1P0C646 297 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 RXRBP28702 533 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 EIF6P56537 245 aaKnown RBP11.35□□□□□ -0.59
CLK3-226ENST00000569406 PDE4DQ08499 809 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 LETM2Q2VYF4 491 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 GLIS3Q8NEA6 775 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 PIP4K2CQ8TBX8 421 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 CRYGNQ8WXF5 182 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 EME1Q96AY2 570 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 C7orf25Q9BPX7 421 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 CCDC134Q9H6E4 229 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 TMEM206Q9H813 350 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 PCDH12Q9NPG4 1184 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 GPRC5DQ9NZD1 345 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 NUMBLQ9Y6R0 609 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 GYG2O15488 501 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 PARNO95453 639 aaKnown RBP11.35□□□□□ -0.59
CLK3-226ENST00000569406 SCNN1DP51172 638 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 NAPAP54920 295 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 MRPS9P82933 396 aaKnown RBP11.35□□□□□ -0.59
CLK3-226ENST00000569406 ZNF543Q08ER8 600 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 DOK7Q18PE1 504 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 DPP8Q6V1X1 898 aaPredicted RBP11.35□□□□□ -0.59
CLK3-226ENST00000569406 UTS2BQ765I0 119 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 GALNT7Q86SF2 657 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 NEK8Q86SG6 692 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 LILRB4Q8NHJ6 448 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 ANKRD49Q8WVL7 239 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 SGCDQ92629 289 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 FAR2Q96K12 515 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 KIAA1586Q9HCI6 787 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 TBC1D14Q9P2M4 693 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 CRNNQ9UBG3 495 aaPredicted RBP11.35□□□□□ -0.59
CLK3-226ENST00000569406 KLHL3Q9UH77 587 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 CHKBQ9Y259 395 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 ATAD5Q96QE3 1844 aa11.35□□□□□ -0.59
CLK3-226ENST00000569406 TMEM120BA0PK00 339 aa11.34□□□□□ -0.59
CLK3-226ENST00000569406 C6orf229H3BNL8 230 aa11.34□□□□□ -0.59
CLK3-226ENST00000569406 PSMD11O00231 422 aa11.34□□□□□ -0.59
CLK3-226ENST00000569406 SNPHO15079 494 aa11.34□□□□□ -0.59
CLK3-226ENST00000569406 TECP42680 631 aa11.34□□□□□ -0.59
CLK3-226ENST00000569406 KLK7P49862 253 aa11.34□□□□□ -0.59
CLK3-226ENST00000569406 THOP1P52888 689 aa11.34□□□□□ -0.59
CLK3-226ENST00000569406 PICALMQ13492 652 aa11.34□□□□□ -0.59
CLK3-226ENST00000569406 CEP78Q5JTW2 689 aa11.34□□□□□ -0.59
CLK3-226ENST00000569406 C6orf118Q5T5N4 469 aa11.34□□□□□ -0.59
CLK3-226ENST00000569406 ANKRD40Q6AI12 368 aa11.34□□□□□ -0.59
CLK3-226ENST00000569406 TMEM151BQ8IW70 566 aa11.34□□□□□ -0.59
CLK3-226ENST00000569406 ADGRF4Q8IZF3 695 aa11.34□□□□□ -0.59
CLK3-226ENST00000569406 TRIML2Q8N7C3 387 aa11.34□□□□□ -0.59
CLK3-226ENST00000569406 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.34□□□□□ -0.59
CLK3-226ENST00000569406 CFAP61Q8NHU2 1237 aa11.34□□□□□ -0.59
CLK3-226ENST00000569406 HELQQ8TDG4 1101 aa11.34□□□□□ -0.59
CLK3-226ENST00000569406 EPS8L3Q8TE67 593 aaKnown RBP11.34□□□□□ -0.59
CLK3-226ENST00000569406 FAM20AQ96MK3 541 aa11.34□□□□□ -0.59
CLK3-226ENST00000569406 NOX5Q96PH1 765 aa11.34□□□□□ -0.59
CLK3-226ENST00000569406 DNAJC7Q99615 494 aa11.34□□□□□ -0.59
CLK3-226ENST00000569406 CADM1Q9BY67 442 aaKnown RBP11.34□□□□□ -0.59
CLK3-226ENST00000569406 SEMA6BQ9H3T3 888 aa11.34□□□□□ -0.59
CLK3-226ENST00000569406 NLRC4Q9NPP4 1024 aa11.34□□□□□ -0.59
CLK3-226ENST00000569406 TMOD2Q9NZR1 351 aa11.34□□□□□ -0.59
CLK3-226ENST00000569406 ATF5Q9Y2D1 282 aaPredicted RBP11.34□□□□□ -0.59
CLK3-226ENST00000569406 AK5Q9Y6K8 562 aa11.34□□□□□ -0.59
CLK3-226ENST00000569406 SCINQ9Y6U3 715 aa11.34□□□□□ -0.59
CLK3-226ENST00000569406 COL4A5P29400 1685 aa11.34□□□□□ -0.59
CLK3-226ENST00000569406 HAT1O14929 419 aa11.34□□□□□ -0.59
CLK3-226ENST00000569406 ZNF263O14978 683 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms