RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 EDN1P05305 212 aa12.26□□□□□ -0.45
CDH3-208ENST00000569036 ZNF883P0CG24 379 aa12.26□□□□□ -0.45
CDH3-208ENST00000569036 GP1BBP13224 206 aa12.26□□□□□ -0.45
CDH3-208ENST00000569036 CYP3A7P24462 503 aa12.26□□□□□ -0.45
CDH3-208ENST00000569036 OPRD1P41143 372 aa12.26□□□□□ -0.45
CDH3-208ENST00000569036 MRPS21P82921 87 aaKnown RBP12.26□□□□□ -0.45
CDH3-208ENST00000569036 PRPF4BQ13523 1007 aaKnown RBP12.26□□□□□ -0.45
CDH3-208ENST00000569036 MTF1Q14872 753 aa12.26□□□□□ -0.45
CDH3-208ENST00000569036 CDCA2Q69YH5 1023 aaPredicted RBP12.26□□□□□ -0.45
CDH3-208ENST00000569036 DHRS13Q6UX07 377 aa12.26□□□□□ -0.45
CDH3-208ENST00000569036 PGBD3Q8N328 593 aa12.26□□□□□ -0.45
CDH3-208ENST00000569036 MAB21L3Q8N8X9 362 aa12.26□□□□□ -0.45
CDH3-208ENST00000569036 TRIML1Q8N9V2 468 aa12.26□□□□□ -0.45
CDH3-208ENST00000569036 IL17RCQ8NAC3 791 aa12.26□□□□□ -0.45
CDH3-208ENST00000569036 ATAD1Q8NBU5 361 aa12.26□□□□□ -0.45
CDH3-208ENST00000569036 TBCKQ8TEA7 893 aa12.26□□□□□ -0.45
CDH3-208ENST00000569036 ATP2A3Q93084 1043 aa12.26□□□□□ -0.45
CDH3-208ENST00000569036 POLR3FQ9H1D9 316 aaPredicted RBP12.26□□□□□ -0.45
CDH3-208ENST00000569036 FAM124BQ9H5Z6 455 aaPredicted RBP12.26□□□□□ -0.45
CDH3-208ENST00000569036 DUS2Q9NX74 493 aaKnown RBP12.26□□□□□ -0.45
CDH3-208ENST00000569036 RGL1Q9NZL6 768 aa12.26□□□□□ -0.45
CDH3-208ENST00000569036 SUSD2Q9UGT4 822 aa12.26□□□□□ -0.45
CDH3-208ENST00000569036 ZMYM5Q9UJ78 669 aa12.26□□□□□ -0.45
CDH3-208ENST00000569036 BRPF3Q9ULD4 1205 aa12.26□□□□□ -0.45
CDH3-208ENST00000569036 PCDHB8Q9UN66 801 aa12.26□□□□□ -0.45
CDH3-208ENST00000569036 WNT6Q9Y6F9 365 aa12.26□□□□□ -0.45
CDH3-208ENST00000569036 NID2Q14112 1375 aa12.26□□□□□ -0.45
CDH3-208ENST00000569036 MYO18AQ92614 2054 aaKnown RBP12.26□□□□□ -0.45
CDH3-208ENST00000569036 MTMR11A4FU01 709 aa12.25□□□□□ -0.45
CDH3-208ENST00000569036 EIF5BO60841 1220 aaKnown RBP12.25□□□□□ -0.45
CDH3-208ENST00000569036 KRT10P13645 584 aa12.25□□□□□ -0.45
CDH3-208ENST00000569036 MCM4P33991 863 aa12.25□□□□□ -0.45
CDH3-208ENST00000569036 CCDC173Q0VFZ6 552 aa12.25□□□□□ -0.45
CDH3-208ENST00000569036 MYO1EQ12965 1108 aa12.25□□□□□ -0.45
CDH3-208ENST00000569036 GPR17Q13304 367 aa12.25□□□□□ -0.45
CDH3-208ENST00000569036 PTPRNQ16849 979 aa12.25□□□□□ -0.45
CDH3-208ENST00000569036 EML3Q32P44 896 aa12.25□□□□□ -0.45
CDH3-208ENST00000569036 DCAF4L1Q3SXM0 396 aa12.25□□□□□ -0.45
CDH3-208ENST00000569036 PREPLQ4J6C6 727 aaPredicted RBP12.25□□□□□ -0.45
CDH3-208ENST00000569036 PKDCCQ504Y2 493 aa12.25□□□□□ -0.45
CDH3-208ENST00000569036 CCDC157Q569K6 752 aa12.25□□□□□ -0.45
CDH3-208ENST00000569036 C6orf118Q5T5N4 469 aa12.25□□□□□ -0.45
CDH3-208ENST00000569036 SFTPA1Q8IWL2 248 aa12.25□□□□□ -0.45
CDH3-208ENST00000569036 SPACA3Q8IXA5 215 aa12.25□□□□□ -0.45
CDH3-208ENST00000569036 ZNF513Q8N8E2 541 aaPredicted RBP12.25□□□□□ -0.45
CDH3-208ENST00000569036 BICD2Q8TD16 824 aa12.25□□□□□ -0.45
CDH3-208ENST00000569036 RHBDD1Q8TEB9 315 aa12.25□□□□□ -0.45
CDH3-208ENST00000569036 OSCP1Q8WVF1 389 aa12.25□□□□□ -0.45
CDH3-208ENST00000569036 TM7SF3Q9NS93 570 aa12.25□□□□□ -0.45
CDH3-208ENST00000569036 SLC38A7Q9NVC3 462 aa12.25□□□□□ -0.45
CDH3-208ENST00000569036 BTBD3Q9Y2F9 522 aa12.25□□□□□ -0.45
CDH3-208ENST00000569036 FNDC3AQ9Y2H6 1198 aaKnown RBP12.25□□□□□ -0.45
CDH3-208ENST00000569036 CITO14578 2027 aa12.25□□□□□ -0.45
CDH3-208ENST00000569036 IGHV1OR15-9A0A0B4J2B8 117 aa12.24□□□□□ -0.45
CDH3-208ENST00000569036 GOLGA8AA7E2F4 631 aa12.24□□□□□ -0.45
CDH3-208ENST00000569036 GOLGA8BA8MQT2 603 aa12.24□□□□□ -0.45
CDH3-208ENST00000569036 USP9YO00507 2555 aaPredicted RBP12.24□□□□□ -0.45
CDH3-208ENST00000569036 FLRT2O43155 660 aa12.24□□□□□ -0.45
CDH3-208ENST00000569036 ZBTB43O43298 467 aa12.24□□□□□ -0.45
CDH3-208ENST00000569036 CILPO75339 1184 aa12.24□□□□□ -0.45
CDH3-208ENST00000569036 UTP20O75691 2785 aaKnown RBP12.24□□□□□ -0.45
CDH3-208ENST00000569036 DGAT1O75907 488 aa12.24□□□□□ -0.45
CDH3-208ENST00000569036 OAZ2O95190 189 aa12.24□□□□□ -0.45
CDH3-208ENST00000569036 ATF6P18850 670 aa12.24□□□□□ -0.45
CDH3-208ENST00000569036 CDC27P30260 824 aa12.24□□□□□ -0.45
CDH3-208ENST00000569036 NMT1P30419 496 aaKnown RBP12.24□□□□□ -0.45
CDH3-208ENST00000569036 ADSSP30520 456 aa12.24□□□□□ -0.45
CDH3-208ENST00000569036 TIE1P35590 1138 aa12.24□□□□□ -0.45
CDH3-208ENST00000569036 IFNAR2P48551 515 aa12.24□□□□□ -0.45
CDH3-208ENST00000569036 YWHAHQ04917 246 aaPredicted RBP12.24□□□□□ -0.45
CDH3-208ENST00000569036 ZNF268Q14587 947 aaPredicted RBP12.24□□□□□ -0.45
CDH3-208ENST00000569036 MYLKQ15746 1914 aa12.24□□□□□ -0.45
CDH3-208ENST00000569036 XKR4Q5GH76 650 aa12.24□□□□□ -0.45
CDH3-208ENST00000569036 EOGTQ5NDL2 527 aa12.24□□□□□ -0.45
CDH3-208ENST00000569036 DBX2Q6ZNG2 339 aa12.24□□□□□ -0.45
CDH3-208ENST00000569036 TMEM150AQ86TG1 271 aa12.24□□□□□ -0.45
CDH3-208ENST00000569036 TMPRSS12Q86WS5 348 aa12.24□□□□□ -0.45
CDH3-208ENST00000569036 RGL4Q8IZJ4 473 aa12.24□□□□□ -0.45
CDH3-208ENST00000569036 TTC9Q92623 222 aa12.24□□□□□ -0.45
CDH3-208ENST00000569036 MED8Q96G25 268 aa12.24□□□□□ -0.45
CDH3-208ENST00000569036 DYDC2Q96IM9 177 aa12.24□□□□□ -0.45
CDH3-208ENST00000569036 ZMAT2Q96NC0 199 aaKnown RBP12.24□□□□□ -0.45
CDH3-208ENST00000569036 SLKQ9H2G2 1235 aaPredicted RBP12.24□□□□□ -0.45
CDH3-208ENST00000569036 GAREM1Q9H706 876 aa12.24□□□□□ -0.45
CDH3-208ENST00000569036 ZSWIM4Q9H7M6 989 aa12.24□□□□□ -0.45
CDH3-208ENST00000569036 RBM8AQ9Y5S9 174 aaKnown RBP12.24□□□□□ -0.45
CDH3-208ENST00000569036 AK5Q9Y6K8 562 aa12.24□□□□□ -0.45
CDH3-208ENST00000569036 TNFSF14O43557 240 aa12.23□□□□□ -0.45
CDH3-208ENST00000569036 SLC37A4O43826 429 aa12.23□□□□□ -0.45
CDH3-208ENST00000569036 ADAM23O75077 832 aa12.23□□□□□ -0.45
CDH3-208ENST00000569036 LARGE1O95461 756 aa12.23□□□□□ -0.45
CDH3-208ENST00000569036 CER1O95813 267 aa12.23□□□□□ -0.45
CDH3-208ENST00000569036 GNSP15586 552 aa12.23□□□□□ -0.45
CDH3-208ENST00000569036 DDX6P26196 483 aaKnown RBP eCLIP12.23□□□□□ -0.45
CDH3-208ENST00000569036 MARCKSP29966 332 aaPredicted RBP12.23□□□□□ -0.45
CDH3-208ENST00000569036 RPL9P32969 192 aaKnown RBP12.23□□□□□ -0.45
CDH3-208ENST00000569036 KCNH2Q12809 1159 aa12.23□□□□□ -0.45
CDH3-208ENST00000569036 CTTNQ14247 550 aaKnown RBP12.23□□□□□ -0.45
CDH3-208ENST00000569036 VEPH1Q14D04 833 aa12.23□□□□□ -0.45
CDH3-208ENST00000569036 EPHA7Q15375 998 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms