RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 UPF2Q9HAU5 1272 aaKnown RBP16.22■□□□□ 0.19
COMMD4-223ENST00000568301 GKN1Q9NS71 199 aa16.22■□□□□ 0.19
COMMD4-223ENST00000568301 RXFP3Q9NSD7 469 aa16.22■□□□□ 0.19
COMMD4-223ENST00000568301 CCDC39Q9UFE4 941 aa16.22■□□□□ 0.19
COMMD4-223ENST00000568301 EXOC7Q9UPT5 735 aa16.22■□□□□ 0.19
COMMD4-223ENST00000568301 CEP295Q9C0D2 2601 aa16.21■□□□□ 0.19
COMMD4-223ENST00000568301 SPAG17Q6Q759 2223 aa16.21■□□□□ 0.19
COMMD4-223ENST00000568301 EXTL3O43909 919 aa16.21■□□□□ 0.19
COMMD4-223ENST00000568301 FOXD2O60548 495 aaPredicted RBP16.21■□□□□ 0.19
COMMD4-223ENST00000568301 F11P03951 625 aa16.21■□□□□ 0.19
COMMD4-223ENST00000568301 HMGA1P17096 107 aaKnown RBP16.21■□□□□ 0.19
COMMD4-223ENST00000568301 DDX6P26196 483 aaKnown RBP eCLIP16.21■□□□□ 0.19
COMMD4-223ENST00000568301 PXNP49023 591 aaPredicted RBP16.21■□□□□ 0.19
COMMD4-223ENST00000568301 NLRP12P59046 1061 aa16.21■□□□□ 0.19
COMMD4-223ENST00000568301 NFE2Q16621 373 aaPredicted RBP16.21■□□□□ 0.19
COMMD4-223ENST00000568301 AASDHQ4L235 1098 aaPredicted RBP16.21■□□□□ 0.19
COMMD4-223ENST00000568301 N4BP2L1Q5TBK1 243 aaPredicted RBP16.21■□□□□ 0.19
COMMD4-223ENST00000568301 IL31Q6EBC2 164 aa16.21■□□□□ 0.19
COMMD4-223ENST00000568301 PKN3Q6P5Z2 889 aa16.21■□□□□ 0.19
COMMD4-223ENST00000568301 USP49Q70CQ1 688 aa16.21■□□□□ 0.19
COMMD4-223ENST00000568301 DYMQ7RTS9 669 aa16.21■□□□□ 0.19
COMMD4-223ENST00000568301 TMEM150AQ86TG1 271 aa16.21■□□□□ 0.19
COMMD4-223ENST00000568301 SFR1Q86XK3 245 aa16.21■□□□□ 0.19
COMMD4-223ENST00000568301 DDX1Q92499 740 aaKnown RBP16.21■□□□□ 0.19
COMMD4-223ENST00000568301 ZNF560Q96MR9 790 aa16.21■□□□□ 0.19
COMMD4-223ENST00000568301 ARRDC1-AS1Q9H2J1 176 aa16.21■□□□□ 0.19
COMMD4-223ENST00000568301 MRPL44Q9H9J2 332 aaKnown RBP16.21■□□□□ 0.19
COMMD4-223ENST00000568301 ABI2Q9NYB9 513 aaPredicted RBP16.21■□□□□ 0.19
COMMD4-223ENST00000568301 PCDHB5Q9Y5E4 795 aa16.21■□□□□ 0.19
COMMD4-223ENST00000568301 OBSL1O75147 1896 aa16.2■□□□□ 0.18
COMMD4-223ENST00000568301 ATG2BQ96BY7 2078 aa16.2■□□□□ 0.18
COMMD4-223ENST00000568301 TM4SF5O14894 197 aa16.2■□□□□ 0.18
COMMD4-223ENST00000568301 GAP43P17677 238 aa16.2■□□□□ 0.18
COMMD4-223ENST00000568301 AVPR1AP37288 418 aa16.2■□□□□ 0.18
COMMD4-223ENST00000568301 CDR1P51861 262 aa16.2■□□□□ 0.18
COMMD4-223ENST00000568301 TSPY1Q01534 308 aa16.2■□□□□ 0.18
COMMD4-223ENST00000568301 TMEM196Q5HYL7 178 aa16.2■□□□□ 0.18
COMMD4-223ENST00000568301 SV2BQ7L1I2 683 aa16.2■□□□□ 0.18
COMMD4-223ENST00000568301 CACTINQ8WUQ7 758 aaKnown RBP16.2■□□□□ 0.18
COMMD4-223ENST00000568301 ACBD6Q9BR61 282 aa16.2■□□□□ 0.18
COMMD4-223ENST00000568301 SMG9Q9H0W8 520 aaKnown RBP16.2■□□□□ 0.18
COMMD4-223ENST00000568301 IKZF4Q9H2S9 585 aa16.2■□□□□ 0.18
COMMD4-223ENST00000568301 ABCB6Q9NP58 842 aa16.2■□□□□ 0.18
COMMD4-223ENST00000568301 TDP1Q9NUW8 608 aa16.2■□□□□ 0.18
COMMD4-223ENST00000568301 SPEGQ15772 3267 aa16.2■□□□□ 0.18
COMMD4-223ENST00000568301 CACNA1GO43497 2377 aa16.19■□□□□ 0.18
COMMD4-223ENST00000568301 CCDC163A0A0D9SF12 145 aa16.19■□□□□ 0.18
COMMD4-223ENST00000568301 TRDMT1O14717 391 aaKnown RBP16.19■□□□□ 0.18
COMMD4-223ENST00000568301 ATG13O75143 517 aa16.19■□□□□ 0.18
COMMD4-223ENST00000568301 LDHAP00338 332 aaKnown RBP16.19■□□□□ 0.18
COMMD4-223ENST00000568301 CSH1P0DML2 217 aa16.19■□□□□ 0.18
COMMD4-223ENST00000568301 CSH2P0DML3 217 aa16.19■□□□□ 0.18
COMMD4-223ENST00000568301 PDCP20941 246 aa16.19■□□□□ 0.18
COMMD4-223ENST00000568301 PMLP29590 882 aa16.19■□□□□ 0.18
COMMD4-223ENST00000568301 LIMK1P53667 647 aa16.19■□□□□ 0.18
COMMD4-223ENST00000568301 AMPD2Q01433 879 aa16.19■□□□□ 0.18
COMMD4-223ENST00000568301 KCNA1Q09470 495 aa16.19■□□□□ 0.18
COMMD4-223ENST00000568301 BFSP1Q12934 665 aa16.19■□□□□ 0.18
COMMD4-223ENST00000568301 RUNX3Q13761 415 aa16.19■□□□□ 0.18
COMMD4-223ENST00000568301 RRAGBQ5VZM2 374 aa16.19■□□□□ 0.18
COMMD4-223ENST00000568301 KBTBD6Q86V97 674 aa16.19■□□□□ 0.18
COMMD4-223ENST00000568301 MON1AQ86VX9 555 aa16.19■□□□□ 0.18
COMMD4-223ENST00000568301 TMEM86AQ8N2M4 240 aa16.19■□□□□ 0.18
COMMD4-223ENST00000568301 MAB21L3Q8N8X9 362 aa16.19■□□□□ 0.18
COMMD4-223ENST00000568301 LEO1Q8WVC0 666 aaPredicted RBP16.19■□□□□ 0.18
COMMD4-223ENST00000568301 USP13Q92995 863 aaPredicted RBP16.19■□□□□ 0.18
COMMD4-223ENST00000568301 DNAJC19Q96DA6 116 aa16.19■□□□□ 0.18
COMMD4-223ENST00000568301 ACCSQ96QU6 501 aa16.19■□□□□ 0.18
COMMD4-223ENST00000568301 FAM213AQ9BRX8 229 aa16.19■□□□□ 0.18
COMMD4-223ENST00000568301 KIF9Q9HAQ2 790 aa16.19■□□□□ 0.18
COMMD4-223ENST00000568301 OLFML3Q9NRN5 406 aa16.19■□□□□ 0.18
COMMD4-223ENST00000568301 TMLHEQ9NVH6 421 aa16.19■□□□□ 0.18
COMMD4-223ENST00000568301 ANGPTL2Q9UKU9 493 aa16.19■□□□□ 0.18
COMMD4-223ENST00000568301 PCDHB13Q9Y5F0 798 aa16.19■□□□□ 0.18
COMMD4-223ENST00000568301 SRPRBQ9Y5M8 271 aaKnown RBP16.19■□□□□ 0.18
COMMD4-223ENST00000568301 CLIC4Q9Y696 253 aa16.19■□□□□ 0.18
COMMD4-223ENST00000568301 MYMKA6NI61 221 aa16.18■□□□□ 0.18
COMMD4-223ENST00000568301 HUS1O60921 280 aa16.18■□□□□ 0.18
COMMD4-223ENST00000568301 PRPF40AO75400 957 aaKnown RBP16.18■□□□□ 0.18
COMMD4-223ENST00000568301 RPP40O75818 363 aaKnown RBP16.18■□□□□ 0.18
COMMD4-223ENST00000568301 ZNF806P0C7X5 589 aa16.18■□□□□ 0.18
COMMD4-223ENST00000568301 GARTP22102 1010 aa16.18■□□□□ 0.18
COMMD4-223ENST00000568301 TXLNAP40222 546 aa16.18■□□□□ 0.18
COMMD4-223ENST00000568301 RAP1GAPP47736 663 aa16.18■□□□□ 0.18
COMMD4-223ENST00000568301 RPL10AP62906 217 aaKnown RBP16.18■□□□□ 0.18
COMMD4-223ENST00000568301 TFAMQ00059 246 aaKnown RBP16.18■□□□□ 0.18
COMMD4-223ENST00000568301 GRSF1Q12849 480 aaKnown RBP eCLIP16.18■□□□□ 0.18
COMMD4-223ENST00000568301 ZNF268Q14587 947 aaPredicted RBP16.18■□□□□ 0.18
COMMD4-223ENST00000568301 L1TD1Q5T7N2 865 aaKnown RBP16.18■□□□□ 0.18
COMMD4-223ENST00000568301 BRSK2Q8IWQ3 736 aa16.18■□□□□ 0.18
COMMD4-223ENST00000568301 PDCL2Q8N4E4 241 aa16.18■□□□□ 0.18
COMMD4-223ENST00000568301 LRRC52Q8N7C0 313 aa16.18■□□□□ 0.18
COMMD4-223ENST00000568301 C12orf50Q8NA57 414 aaPredicted RBP16.18■□□□□ 0.18
COMMD4-223ENST00000568301 SPATA18Q8TC71 538 aa16.18■□□□□ 0.18
COMMD4-223ENST00000568301 GAB3Q8WWW8 586 aa16.18■□□□□ 0.18
COMMD4-223ENST00000568301 MRPS31Q92665 395 aaKnown RBP16.18■□□□□ 0.18
COMMD4-223ENST00000568301 MYRFLQ96LU7 910 aa16.18■□□□□ 0.18
COMMD4-223ENST00000568301 PI4K2AQ9BTU6 479 aa16.18■□□□□ 0.18
COMMD4-223ENST00000568301 SMOC1Q9H4F8 434 aa16.18■□□□□ 0.18
COMMD4-223ENST00000568301 HPS4Q9NQG7 708 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms