RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 NR2E3Q9Y5X4 410 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 STYXL1Q9Y6J8 313 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 SMTNL1A8MU46 457 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 BECN2A8MW95 431 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 ENPP3O14638 875 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 CETN3O15182 167 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 OGTO15294 1046 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 EXOC3O60645 756 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 WNT11O96014 354 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 B3GALT4O96024 378 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 STAG3L1P0CL83 205 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 MCF2P10911 925 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 RPL13P26373 211 aaKnown RBP8.4□□□□□ -1.06
SMG1-214ENST00000568038 TNFSF9P41273 254 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 CASP4P49662 377 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 ACOT2P49753 483 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 MYL5Q02045 173 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 FPGSQ05932 587 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 PPIGQ13427 754 aaKnown RBP eCLIP8.4□□□□□ -1.062e-6■■□□□ 13.5
SMG1-214ENST00000568038 DCAF4L1Q3SXM0 396 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 HP1BP3Q5SSJ5 553 aaPredicted RBP8.4□□□□□ -1.06
SMG1-214ENST00000568038 SPATA1Q5VX52 437 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 CNKSR3Q6P9H4 555 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 LUZP1Q86V48 1076 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 GAS2L3Q86XJ1 694 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 DTX1Q86Y01 620 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 DHX40Q8IX18 779 aaKnown RBP8.4□□□□□ -1.06
SMG1-214ENST00000568038 C12orf56Q8IXR9 622 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 TMEM192Q8IY95 271 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 GPD1LQ8N335 351 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 XXYLT1Q8NBI6 393 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 RNF169Q8NCN4 708 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 TET1Q8NFU7 2136 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 LINC01599Q8WXQ3 324 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 APBB2Q92870 758 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 CCDC51Q96ER9 411 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 FTHL17Q9BXU8 183 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 NXF3Q9H4D5 531 aaKnown RBP8.4□□□□□ -1.06
SMG1-214ENST00000568038 IL23AQ9NPF7 189 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 FAM105AQ9NUU6 356 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 FANCLQ9NW38 375 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 DMAC2Q9NW81 257 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 PARP2Q9UGN5 583 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 FRMD4BQ9Y2L6 1034 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 NFE2L3Q9Y4A8 694 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 IPPQ9Y573 584 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 PCDHB2Q9Y5E7 798 aa8.4□□□□□ -1.06
SMG1-214ENST00000568038 BRCA2P51587 3418 aa8.4□□□□□ -1.07
SMG1-214ENST00000568038 TANC1Q9C0D5 1861 aa8.4□□□□□ -1.07
SMG1-214ENST00000568038 A0A0U1RQF3 1178 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 TMEM238LA0A1B0GVL6 79 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 C9IYK1 514 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 KIAA0391O15091 583 aaKnown RBP8.39□□□□□ -1.07
SMG1-214ENST00000568038 EXTL3O43909 919 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 AKAP3O75969 853 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 FGFR1OPO95684 399 aaKnown RBP8.39□□□□□ -1.07
SMG1-214ENST00000568038 CAVIN2O95810 425 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 LDHAP00338 332 aaKnown RBP8.39□□□□□ -1.07
SMG1-214ENST00000568038 FGBP02675 491 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 ADRB2P07550 413 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 PFKMP08237 780 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 CLTAP09496 248 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 ITPKAP23677 461 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 AKAP5P24588 427 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 ASPAP45381 313 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 RAB27AP51159 221 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 EPHB4P54760 987 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 MYBPC2Q14324 1141 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 NCAPHQ15003 741 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 IQCB1Q15051 598 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 NFIL3Q16649 462 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 CCDC40Q4G0X9 1142 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 CRELD2Q6UXH1 353 aaPredicted RBP8.39□□□□□ -1.07
SMG1-214ENST00000568038 LRRC55Q6ZSA7 311 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 ZNF365Q70YC5 407 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 SLC24A5Q71RS6 500 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 C16orf59Q7L2K0 433 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 OTOP2Q7RTS6 562 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 FILIP1Q7Z7B0 1213 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 ECHDC2Q86YB7 292 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 CBWD2Q8IUF1 395 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 LPPQ93052 612 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 ACAP3Q96P50 834 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 BPIFA3Q9BQP9 254 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 CCDC94Q9BW85 323 aaPredicted RBP8.39□□□□□ -1.07
SMG1-214ENST00000568038 KRTAP9-2Q9BYQ4 174 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 RPF1Q9H9Y2 349 aaKnown RBP8.39□□□□□ -1.07
SMG1-214ENST00000568038 ABCB6Q9NP58 842 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 RGS18Q9NS28 235 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 C1orf112Q9NSG2 853 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 SAMSN1Q9NSI8 373 aaKnown RBP8.39□□□□□ -1.07
SMG1-214ENST00000568038 RNF19AQ9NV58 838 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 SNTG2Q9NY99 539 aa8.39□□□□□ -1.07
SMG1-214ENST00000568038 ABHD14A-ACY1A0A1B0GW23 586 aa8.38□□□□□ -1.07
SMG1-214ENST00000568038 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.38□□□□□ -1.07
SMG1-214ENST00000568038 SOWAHDA6NJG2 315 aa8.38□□□□□ -1.07
SMG1-214ENST00000568038 ZNF233A6NK53 670 aa8.38□□□□□ -1.07
SMG1-214ENST00000568038 MEIS3P2A8K0S8 358 aa8.38□□□□□ -1.07
SMG1-214ENST00000568038 GOLGA6L19H0YKK7 550 aa8.38□□□□□ -1.07
SMG1-214ENST00000568038 IKBKBO14920 756 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms