RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 DHX15O43143 795 aaKnown RBP12.15□□□□□ -0.46
CDH1-210ENST00000566612 PPFIA2O75334 1257 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 KRT38O76015 456 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 IL18RAPO95256 599 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 CHKAP35790 457 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 TAS2R40P59535 323 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 TAF12Q16514 161 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 GOLGA7BQ2TAP0 167 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 LVRNQ6Q4G3 990 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 ERO1BQ86YB8 467 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 BRSK2Q8IWQ3 736 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 ERP27Q96DN0 273 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 ZBTB10Q96DT7 871 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 PSMC3IPQ9P2W1 217 aaPredicted RBP12.15□□□□□ -0.46
CDH1-210ENST00000566612 ZC3H7BQ9UGR2 993 aaKnown RBP12.15□□□□□ -0.46
CDH1-210ENST00000566612 SPATA31C2B4DYI2 1134 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 MAGEB2O15479 319 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 TRAPPC3O43617 180 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 DCTN3O75935 186 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 PECAM1P16284 738 aaPredicted RBP12.15□□□□□ -0.46
CDH1-210ENST00000566612 OVGP1Q12889 678 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 PACS2Q86VP3 889 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 LMNTD2Q8IXW0 634 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 MFSD14AQ96MC6 490 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 AVENQ9NQS1 362 aaPredicted RBP12.15□□□□□ -0.46
CDH1-210ENST00000566612 MARCOQ9UEW3 520 aaPredicted RBP12.15□□□□□ -0.46
CDH1-210ENST00000566612 CCDC78A2IDD5 438 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 GPD1P21695 349 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 RNASELQ05823 741 aaKnown RBP12.15□□□□□ -0.46
CDH1-210ENST00000566612 PTPN11Q06124 597 aaPredicted RBP12.15□□□□□ -0.46
CDH1-210ENST00000566612 TTC27Q6P3X3 843 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 RFX8Q6ZV50 586 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 C12orf56Q8IXR9 622 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 NACA2Q9H009 215 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 VPS11Q9H270 941 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 CD248Q9HCU0 757 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 DPP3Q9NY33 737 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 NINJ2Q9NZG7 142 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 PCYOX1Q9UHG3 505 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 R3HDM2Q9Y2K5 976 aaKnown RBP12.15□□□□□ -0.46
CDH1-210ENST00000566612 UMODL1Q5DID0 1318 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 UBR2Q8IWV8 1755 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 ZMYM2Q9UBW7 1377 aa12.15□□□□□ -0.46
CDH1-210ENST00000566612 FOXO6A8MYZ6 492 aa12.14□□□□□ -0.47
CDH1-210ENST00000566612 CYP2C8P10632 490 aa12.14□□□□□ -0.47
CDH1-210ENST00000566612 CHRNB2P17787 502 aa12.14□□□□□ -0.47
CDH1-210ENST00000566612 NFIL3Q16649 462 aa12.14□□□□□ -0.47
CDH1-210ENST00000566612 ABHD15Q6UXT9 468 aa12.14□□□□□ -0.47
CDH1-210ENST00000566612 EIF1ADQ8N9N8 165 aaKnown RBP12.14□□□□□ -0.47
CDH1-210ENST00000566612 GPRC5AQ8NFJ5 357 aa12.14□□□□□ -0.47
CDH1-210ENST00000566612 SGSM3Q96HU1 749 aa12.14□□□□□ -0.47
CDH1-210ENST00000566612 CACNA1SQ13698 1873 aa12.14□□□□□ -0.47
CDH1-210ENST00000566612 E2F8A0AVK6 867 aa12.14□□□□□ -0.47
CDH1-210ENST00000566612 CST3P01034 146 aaPredicted RBP12.14□□□□□ -0.47
CDH1-210ENST00000566612 TGFB3P10600 412 aa12.14□□□□□ -0.47
CDH1-210ENST00000566612 KCNA2P16389 499 aa12.14□□□□□ -0.47
CDH1-210ENST00000566612 RFC1P35251 1148 aaPredicted RBP12.14□□□□□ -0.47
CDH1-210ENST00000566612 PSMC4P43686 418 aa12.14□□□□□ -0.47
CDH1-210ENST00000566612 ARFIP2P53365 341 aa12.14□□□□□ -0.47
CDH1-210ENST00000566612 SNAPC2Q13487 334 aa12.14□□□□□ -0.47
CDH1-210ENST00000566612 TREML2Q5T2D2 321 aa12.14□□□□□ -0.47
CDH1-210ENST00000566612 PID1Q7Z2X4 250 aa12.14□□□□□ -0.47
CDH1-210ENST00000566612 SLFN11Q7Z7L1 901 aa12.14□□□□□ -0.47
CDH1-210ENST00000566612 FBXO36Q8NEA4 188 aa12.14□□□□□ -0.47
CDH1-210ENST00000566612 PLEKHO2Q8TD55 490 aa12.14□□□□□ -0.47
CDH1-210ENST00000566612 SH3GL2Q99962 352 aa12.14□□□□□ -0.47
CDH1-210ENST00000566612 SIK2Q9H0K1 926 aa12.14□□□□□ -0.47
CDH1-210ENST00000566612 RSAD1Q9HA92 442 aa12.14□□□□□ -0.47
CDH1-210ENST00000566612 XPNPEP1Q9NQW7 623 aa12.14□□□□□ -0.47
CDH1-210ENST00000566612 TXNDC9O14530 226 aa12.14□□□□□ -0.47
CDH1-210ENST00000566612 ZNF536O15090 1300 aa12.14□□□□□ -0.47
CDH1-210ENST00000566612 B4GALT5O43286 388 aa12.14□□□□□ -0.47
CDH1-210ENST00000566612 SSTR1P30872 391 aa12.14□□□□□ -0.47
CDH1-210ENST00000566612 SCTRP47872 440 aa12.14□□□□□ -0.47
CDH1-210ENST00000566612 HSDL1Q3SXM5 330 aa12.14□□□□□ -0.47
CDH1-210ENST00000566612 PPIL6Q8IXY8 311 aa12.14□□□□□ -0.47
CDH1-210ENST00000566612 RXFP2Q8WXD0 754 aa12.14□□□□□ -0.47
CDH1-210ENST00000566612 GYG2O15488 501 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 GARSP41250 739 aaKnown RBP12.13□□□□□ -0.47
CDH1-210ENST00000566612 PTK7Q13308 1070 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 LAMC2Q13753 1193 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 DENND1BQ6P3S1 775 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 ZPBP2Q6X784 338 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 N4BP2L2Q92802 583 aaPredicted RBP12.13□□□□□ -0.47
CDH1-210ENST00000566612 PGM2Q96G03 612 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 VPS33BQ9H267 617 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 UBN1Q9NPG3 1134 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 USP18Q9UMW8 372 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 LACTBL1A8MY62 500 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 CYP2C9P11712 490 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 NCF2P19878 526 aaPredicted RBP12.13□□□□□ -0.47
CDH1-210ENST00000566612 ARPP19P56211 112 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 ZNF200P98182 395 aaPredicted RBP12.13□□□□□ -0.47
CDH1-210ENST00000566612 DRP2Q13474 957 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 AUHQ13825 339 aaKnown RBP12.13□□□□□ -0.47
CDH1-210ENST00000566612 NUDCD3Q8IVD9 361 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 TMEM176AQ96HP8 235 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 SENP1Q9P0U3 644 aa12.13□□□□□ -0.47
CDH1-210ENST00000566612 SMG5Q9UPR3 1016 aaKnown RBP12.13□□□□□ -0.47
CDH1-210ENST00000566612 TIAM2Q8IVF5 1701 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms