RNA–Protein interactions for RNA: ENST00000566052.1

IFT140-207, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 544 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-207ENST00000566052 ABCB6Q9NP58 842 aa15.97■□□□□ 0.15
IFT140-207ENST00000566052 TMLHEQ9NVH6 421 aa15.97■□□□□ 0.15
IFT140-207ENST00000566052 GDAP2Q9NXN4 497 aa15.97■□□□□ 0.15
IFT140-207ENST00000566052 USP18Q9UMW8 372 aa15.97■□□□□ 0.15
IFT140-207ENST00000566052 ACACBO00763 2458 aa15.97■□□□□ 0.15
IFT140-207ENST00000566052 GREB1Q4ZG55 1949 aa15.97■□□□□ 0.15
IFT140-207ENST00000566052 ANAPC1Q9H1A4 1944 aa15.97■□□□□ 0.15
IFT140-207ENST00000566052 ITGB3P05106 788 aa15.96■□□□□ 0.15
IFT140-207ENST00000566052 TXLNAP40222 546 aa15.96■□□□□ 0.15
IFT140-207ENST00000566052 CDR1P51861 262 aa15.96■□□□□ 0.15
IFT140-207ENST00000566052 CASP5P51878 434 aa15.96■□□□□ 0.15
IFT140-207ENST00000566052 TFAMQ00059 246 aaKnown RBP15.96■□□□□ 0.15
IFT140-207ENST00000566052 SPEM2Q0P670 501 aa15.96■□□□□ 0.15
IFT140-207ENST00000566052 RESTQ13127 1097 aa15.96■□□□□ 0.15
IFT140-207ENST00000566052 SIM2Q14190 667 aaPredicted RBP15.96■□□□□ 0.15
IFT140-207ENST00000566052 ZNF268Q14587 947 aaPredicted RBP15.96■□□□□ 0.15
IFT140-207ENST00000566052 MON1AQ86VX9 555 aa15.96■□□□□ 0.15
IFT140-207ENST00000566052 C1orf127Q8N9H9 656 aa15.96■□□□□ 0.15
IFT140-207ENST00000566052 TTC8Q8TAM2 541 aa15.96■□□□□ 0.15
IFT140-207ENST00000566052 USP13Q92995 863 aaPredicted RBP15.96■□□□□ 0.15
IFT140-207ENST00000566052 MYRFLQ96LU7 910 aa15.96■□□□□ 0.15
IFT140-207ENST00000566052 CLIC6Q96NY7 704 aa15.96■□□□□ 0.15
IFT140-207ENST00000566052 PKMYT1Q99640 499 aa15.96■□□□□ 0.15
IFT140-207ENST00000566052 SMG9Q9H0W8 520 aaKnown RBP15.96■□□□□ 0.15
IFT140-207ENST00000566052 KIF9Q9HAQ2 790 aa15.96■□□□□ 0.15
IFT140-207ENST00000566052 GKN1Q9NS71 199 aa15.96■□□□□ 0.15
IFT140-207ENST00000566052 C2orf42Q9NWW7 574 aa15.96■□□□□ 0.15
IFT140-207ENST00000566052 CDV3Q9UKY7 258 aaKnown RBP15.96■□□□□ 0.15
IFT140-207ENST00000566052 L1RE1Q9UN81 338 aa15.96■□□□□ 0.15
IFT140-207ENST00000566052 AGAP1Q9UPQ3 857 aa15.96■□□□□ 0.15
IFT140-207ENST00000566052 CCL26Q9Y258 94 aa15.96■□□□□ 0.15
IFT140-207ENST00000566052 KMT2BQ9UMN6 2715 aaPredicted RBP15.96■□□□□ 0.15
IFT140-207ENST00000566052 HUS1O60921 280 aa15.95■□□□□ 0.14
IFT140-207ENST00000566052 GCNT3O95395 438 aa15.95■□□□□ 0.14
IFT140-207ENST00000566052 CSH1P0DML2 217 aa15.95■□□□□ 0.14
IFT140-207ENST00000566052 CSH2P0DML3 217 aa15.95■□□□□ 0.14
IFT140-207ENST00000566052 SYT1P21579 422 aa15.95■□□□□ 0.14
IFT140-207ENST00000566052 POLR2BP30876 1174 aaKnown RBP15.95■□□□□ 0.14
IFT140-207ENST00000566052 AVPR1AP37288 418 aa15.95■□□□□ 0.14
IFT140-207ENST00000566052 RUNX3Q13761 415 aa15.95■□□□□ 0.14
IFT140-207ENST00000566052 LPAL2Q16609 132 aa15.95■□□□□ 0.14
IFT140-207ENST00000566052 TMEM196Q5HYL7 178 aa15.95■□□□□ 0.14
IFT140-207ENST00000566052 INTS6LQ5JSJ4 861 aaKnown RBP15.95■□□□□ 0.14
IFT140-207ENST00000566052 CCDC73Q6ZRK6 1079 aa15.95■□□□□ 0.14
IFT140-207ENST00000566052 PRR23BQ6ZRT6 265 aa15.95■□□□□ 0.14
IFT140-207ENST00000566052 MAB21L3Q8N8X9 362 aa15.95■□□□□ 0.14
IFT140-207ENST00000566052 CHFRQ96EP1 664 aa15.95■□□□□ 0.14
IFT140-207ENST00000566052 SAAL1Q96ER3 474 aa15.95■□□□□ 0.14
IFT140-207ENST00000566052 TRMT2BQ96GJ1 504 aaKnown RBP15.95■□□□□ 0.14
IFT140-207ENST00000566052 HPS4Q9NQG7 708 aa15.95■□□□□ 0.14
IFT140-207ENST00000566052 TDP1Q9NUW8 608 aa15.95■□□□□ 0.14
IFT140-207ENST00000566052 RBAKQ9NYW8 714 aaPredicted RBP15.95■□□□□ 0.14
IFT140-207ENST00000566052 TBC1D7Q9P0N9 293 aa15.95■□□□□ 0.14
IFT140-207ENST00000566052 ITGA11Q9UKX5 1188 aa15.95■□□□□ 0.14
IFT140-207ENST00000566052 EML5Q05BV3 1969 aa15.95■□□□□ 0.14
IFT140-207ENST00000566052 ATG2BQ96BY7 2078 aa15.95■□□□□ 0.14
IFT140-207ENST00000566052 PTPRDP23468 1912 aa15.94■□□□□ 0.14
IFT140-207ENST00000566052 CCDC163A0A0D9SF12 145 aa15.94■□□□□ 0.14
IFT140-207ENST00000566052 TRDMT1O14717 391 aaKnown RBP15.94■□□□□ 0.14
IFT140-207ENST00000566052 GABRDO14764 452 aa15.94■□□□□ 0.14
IFT140-207ENST00000566052 EXTL3O43909 919 aa15.94■□□□□ 0.14
IFT140-207ENST00000566052 PRPF40AO75400 957 aaKnown RBP15.94■□□□□ 0.14
IFT140-207ENST00000566052 NOL4O94818 638 aa15.94■□□□□ 0.14
IFT140-207ENST00000566052 CENPBP07199 599 aaPredicted RBP15.94■□□□□ 0.14
IFT140-207ENST00000566052 RPL10AP62906 217 aaKnown RBP15.94■□□□□ 0.14
IFT140-207ENST00000566052 MYL7Q01449 175 aa15.94■□□□□ 0.14
IFT140-207ENST00000566052 SLC39A14Q15043 492 aa15.94■□□□□ 0.14
IFT140-207ENST00000566052 CSRP2Q16527 193 aa15.94■□□□□ 0.14
IFT140-207ENST00000566052 CFAP221Q4G0U5 840 aa15.94■□□□□ 0.14
IFT140-207ENST00000566052 TXNDC8Q6A555 127 aa15.94■□□□□ 0.14
IFT140-207ENST00000566052 FAM173BQ6P4H8 233 aa15.94■□□□□ 0.14
IFT140-207ENST00000566052 LIMS2Q7Z4I7 341 aa15.94■□□□□ 0.14
IFT140-207ENST00000566052 WDR5BQ86VZ2 330 aa15.94■□□□□ 0.14
IFT140-207ENST00000566052 TOP6BLQ8N6T0 577 aa15.94■□□□□ 0.14
IFT140-207ENST00000566052 MRPS31Q92665 395 aaKnown RBP15.94■□□□□ 0.14
IFT140-207ENST00000566052 CBWD1Q9BRT8 395 aa15.94■□□□□ 0.14
IFT140-207ENST00000566052 PI4K2AQ9BTU6 479 aa15.94■□□□□ 0.14
IFT140-207ENST00000566052 TMEM206Q9H813 350 aa15.94■□□□□ 0.14
IFT140-207ENST00000566052 DDX43Q9NXZ2 648 aaKnown RBP15.94■□□□□ 0.14
IFT140-207ENST00000566052 UXTQ9UBK9 157 aaPredicted RBP15.94■□□□□ 0.14
IFT140-207ENST00000566052 CHD8Q9HCK8 2581 aa15.94■□□□□ 0.14
IFT140-207ENST00000566052 KIAA1549LQ6ZVL6 1849 aa15.94■□□□□ 0.14
IFT140-207ENST00000566052 LAMA1P25391 3075 aa15.93■□□□□ 0.14
IFT140-207ENST00000566052 A0A087X0B3 334 aa15.93■□□□□ 0.14
IFT140-207ENST00000566052 OTOL1A6NHN0 477 aaPredicted RBP15.93■□□□□ 0.14
IFT140-207ENST00000566052 KIAA0391O15091 583 aaKnown RBP15.93■□□□□ 0.14
IFT140-207ENST00000566052 FOXD2O60548 495 aaPredicted RBP15.93■□□□□ 0.14
IFT140-207ENST00000566052 CYP2F1P24903 491 aa15.93■□□□□ 0.14
IFT140-207ENST00000566052 LHX1P48742 406 aa15.93■□□□□ 0.14
IFT140-207ENST00000566052 GPR15P49685 360 aa15.93■□□□□ 0.14
IFT140-207ENST00000566052 RBP5P82980 135 aa15.93■□□□□ 0.14
IFT140-207ENST00000566052 AMPD2Q01433 879 aa15.93■□□□□ 0.14
IFT140-207ENST00000566052 BFSP1Q12934 665 aa15.93■□□□□ 0.14
IFT140-207ENST00000566052 SRSF5Q13243 272 aaKnown RBP15.93■□□□□ 0.14
IFT140-207ENST00000566052 SCARA3Q6AZY7 606 aa15.93■□□□□ 0.14
IFT140-207ENST00000566052 FSTL4Q6MZW2 842 aa15.93■□□□□ 0.14
IFT140-207ENST00000566052 DPH6Q7L8W6 267 aa15.93■□□□□ 0.14
IFT140-207ENST00000566052 SYCP3Q8IZU3 236 aa15.93■□□□□ 0.14
IFT140-207ENST00000566052 CSGALNACT2Q8N6G5 542 aa15.93■□□□□ 0.14
IFT140-207ENST00000566052 NETO1Q8TDF5 533 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms