RNA–Protein interactions for RNA: ENST00000563668.5

SPSB3-202, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,509 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-202ENST00000563668 M0R296 226 aa18.28■□□□□ 0.52
SPSB3-202ENST00000563668 TPM1P09493 284 aa18.28■□□□□ 0.52
SPSB3-202ENST00000563668 LAMP2P13473 410 aa18.28■□□□□ 0.52
SPSB3-202ENST00000563668 CASP14P31944 242 aa18.28■□□□□ 0.52
SPSB3-202ENST00000563668 UBXN1Q04323 297 aa18.28■□□□□ 0.52
SPSB3-202ENST00000563668 GPR17Q13304 367 aa18.28■□□□□ 0.52
SPSB3-202ENST00000563668 HS2ST1Q7LGA3 356 aa18.28■□□□□ 0.52
SPSB3-202ENST00000563668 LRRTM3Q86VH5 581 aa18.28■□□□□ 0.52
SPSB3-202ENST00000563668 XXYLT1Q8NBI6 393 aa18.28■□□□□ 0.52
SPSB3-202ENST00000563668 ATAD1Q8NBU5 361 aa18.28■□□□□ 0.52
SPSB3-202ENST00000563668 ZNF516Q92618 1163 aa18.28■□□□□ 0.52
SPSB3-202ENST00000563668 CCDC127Q96BQ5 260 aa18.28■□□□□ 0.52
SPSB3-202ENST00000563668 TUBGCP2Q9BSJ2 902 aa18.28■□□□□ 0.52
SPSB3-202ENST00000563668 RPP25Q9BUL9 199 aaKnown RBP18.28■□□□□ 0.52
SPSB3-202ENST00000563668 CEP72Q9P209 647 aa18.28■□□□□ 0.52
SPSB3-202ENST00000563668 EPS15L1Q9UBC2 864 aa18.28■□□□□ 0.52
SPSB3-202ENST00000563668 SLC27A5Q9Y2P5 690 aa18.28■□□□□ 0.52
SPSB3-202ENST00000563668 OR6C75A6NL08 312 aa18.27■□□□□ 0.51
SPSB3-202ENST00000563668 HCRTO43612 131 aa18.27■□□□□ 0.51
SPSB3-202ENST00000563668 XYLBO75191 536 aa18.27■□□□□ 0.51
SPSB3-202ENST00000563668 SOAT2O75908 522 aa18.27■□□□□ 0.51
SPSB3-202ENST00000563668 PDGFBP01127 241 aaPredicted RBP18.27■□□□□ 0.51
SPSB3-202ENST00000563668 TUBB4AP04350 444 aa18.27■□□□□ 0.51
SPSB3-202ENST00000563668 KRT19P08727 400 aa18.27■□□□□ 0.51
SPSB3-202ENST00000563668 POU2F2P09086 479 aa18.27■□□□□ 0.51
SPSB3-202ENST00000563668 DLATP10515 647 aaKnown RBP18.27■□□□□ 0.51
SPSB3-202ENST00000563668 CASP4P49662 377 aa18.27■□□□□ 0.51
SPSB3-202ENST00000563668 CYP24A1Q07973 514 aa18.27■□□□□ 0.51
SPSB3-202ENST00000563668 TWF1Q12792 350 aa18.27■□□□□ 0.51
SPSB3-202ENST00000563668 DUSP4Q13115 394 aa18.27■□□□□ 0.51
SPSB3-202ENST00000563668 SV2CQ496J9 727 aa18.27■□□□□ 0.51
SPSB3-202ENST00000563668 CREBRFQ8IUR6 639 aa18.27■□□□□ 0.51
SPSB3-202ENST00000563668 REXO1L1PQ8IX06 675 aa18.27■□□□□ 0.51
SPSB3-202ENST00000563668 C12orf56Q8IXR9 622 aa18.27■□□□□ 0.51
SPSB3-202ENST00000563668 HS6ST3Q8IZP7 471 aa18.27■□□□□ 0.51
SPSB3-202ENST00000563668 ING5Q8WYH8 240 aa18.27■□□□□ 0.51
SPSB3-202ENST00000563668 FGF13Q92913 245 aa18.27■□□□□ 0.51
SPSB3-202ENST00000563668 DMAC2Q9NW81 257 aa18.27■□□□□ 0.51
SPSB3-202ENST00000563668 ITGA11Q9UKX5 1188 aa18.27■□□□□ 0.51
SPSB3-202ENST00000563668 L1RE1Q9UN81 338 aa18.27■□□□□ 0.51
SPSB3-202ENST00000563668 MTMR11A4FU01 709 aa18.26■□□□□ 0.51
SPSB3-202ENST00000563668 RIOK3O14730 519 aaKnown RBP18.26■□□□□ 0.51
SPSB3-202ENST00000563668 ZSCAN12O43309 604 aa18.26■□□□□ 0.51
SPSB3-202ENST00000563668 NARSO43776 548 aaKnown RBP18.26■□□□□ 0.51
SPSB3-202ENST00000563668 FGFR1OPO95684 399 aaKnown RBP18.26■□□□□ 0.51
SPSB3-202ENST00000563668 CST3P01034 146 aaPredicted RBP18.26■□□□□ 0.51
SPSB3-202ENST00000563668 LRG1P02750 347 aa18.26■□□□□ 0.51
SPSB3-202ENST00000563668 RHOP08100 348 aa18.26■□□□□ 0.51
SPSB3-202ENST00000563668 TMEM191BP0C7N4 346 aa18.26■□□□□ 0.51
SPSB3-202ENST00000563668 CCR2P41597 374 aa18.26■□□□□ 0.51
SPSB3-202ENST00000563668 SNRPFP62306 86 aaKnown RBP18.26■□□□□ 0.51
SPSB3-202ENST00000563668 SIGLEC14Q08ET2 396 aa18.26■□□□□ 0.51
SPSB3-202ENST00000563668 BFSP1Q12934 665 aa18.26■□□□□ 0.51
SPSB3-202ENST00000563668 PSMD6Q15008 389 aa18.26■□□□□ 0.51
SPSB3-202ENST00000563668 PABPC1LQ4VXU2 614 aaKnown RBP18.26■□□□□ 0.51
SPSB3-202ENST00000563668 ZCWPW2Q504Y3 356 aa18.26■□□□□ 0.51
SPSB3-202ENST00000563668 RTL10Q7L3V2 364 aa18.26■□□□□ 0.51
SPSB3-202ENST00000563668 PDCL2Q8N4E4 241 aa18.26■□□□□ 0.51
SPSB3-202ENST00000563668 CPLX3Q8WVH0 158 aa18.26■□□□□ 0.51
SPSB3-202ENST00000563668 TCEAL4Q96EI5 215 aa18.26■□□□□ 0.51
SPSB3-202ENST00000563668 MFSD14AQ96MC6 490 aa18.26■□□□□ 0.51
SPSB3-202ENST00000563668 KIAA1586Q9HCI6 787 aa18.26■□□□□ 0.51
SPSB3-202ENST00000563668 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.26■□□□□ 0.51
SPSB3-202ENST00000563668 PPP2R2CQ9Y2T4 447 aa18.26■□□□□ 0.51
SPSB3-202ENST00000563668 PAX3P23760 479 aa18.25■□□□□ 0.51
SPSB3-202ENST00000563668 MTIF2P46199 727 aaKnown RBP18.25■□□□□ 0.51
SPSB3-202ENST00000563668 RBP5P82980 135 aa18.25■□□□□ 0.51
SPSB3-202ENST00000563668 MTMR3Q13615 1198 aa18.25■□□□□ 0.51
SPSB3-202ENST00000563668 MYBPC2Q14324 1141 aa18.25■□□□□ 0.51
SPSB3-202ENST00000563668 CCDC142Q17RM4 750 aa18.25■□□□□ 0.51
SPSB3-202ENST00000563668 DUOXA2Q1HG44 320 aa18.25■□□□□ 0.51
SPSB3-202ENST00000563668 MIIPQ5JXC2 388 aa18.25■□□□□ 0.51
SPSB3-202ENST00000563668 OSTM1Q86WC4 334 aa18.25■□□□□ 0.51
SPSB3-202ENST00000563668 WDR49Q8IV35 697 aa18.25■□□□□ 0.51
SPSB3-202ENST00000563668 LRRC52Q8N7C0 313 aa18.25■□□□□ 0.51
SPSB3-202ENST00000563668 ANKRD36BP1Q96IX9 119 aa18.25■□□□□ 0.51
SPSB3-202ENST00000563668 ZNF560Q96MR9 790 aa18.25■□□□□ 0.51
SPSB3-202ENST00000563668 TSG101Q99816 390 aa18.25■□□□□ 0.51
SPSB3-202ENST00000563668 CORO1BQ9BR76 489 aa18.25■□□□□ 0.51
SPSB3-202ENST00000563668 ZCWPW1Q9H0M4 648 aa18.25■□□□□ 0.51
SPSB3-202ENST00000563668 TMLHEQ9NVH6 421 aa18.25■□□□□ 0.51
SPSB3-202ENST00000563668 CDH7Q9ULB5 785 aa18.25■□□□□ 0.51
SPSB3-202ENST00000563668 RNF225M0QZC1 329 aaPredicted RBP18.24■□□□□ 0.51
SPSB3-202ENST00000563668 DYNC1I1O14576 645 aa18.24■□□□□ 0.51
SPSB3-202ENST00000563668 EXOC3O60645 756 aa18.24■□□□□ 0.51
SPSB3-202ENST00000563668 PTPN2P17706 415 aa18.24■□□□□ 0.51
SPSB3-202ENST00000563668 TDGQ13569 410 aa18.24■□□□□ 0.51
SPSB3-202ENST00000563668 SLC39A12Q504Y0 691 aa18.24■□□□□ 0.51
SPSB3-202ENST00000563668 PARM1Q6UWI2 310 aa18.24■□□□□ 0.51
SPSB3-202ENST00000563668 TRAPPC11Q7Z392 1133 aa18.24■□□□□ 0.51
SPSB3-202ENST00000563668 NPAS3Q8IXF0 933 aa18.24■□□□□ 0.51
SPSB3-202ENST00000563668 SLC44A3Q8N4M1 653 aa18.24■□□□□ 0.51
SPSB3-202ENST00000563668 FGF14Q92915 247 aa18.24■□□□□ 0.51
SPSB3-202ENST00000563668 ELMO3Q96BJ8 720 aa18.24■□□□□ 0.51
SPSB3-202ENST00000563668 OXCT2Q9BYC2 517 aaPredicted RBP18.24■□□□□ 0.51
SPSB3-202ENST00000563668 DSEQ9UL01 958 aa18.24■□□□□ 0.51
SPSB3-202ENST00000563668 YIPF1Q9Y548 306 aa18.24■□□□□ 0.51
SPSB3-202ENST00000563668 SNX9Q9Y5X1 595 aa18.24■□□□□ 0.51
SPSB3-202ENST00000563668 ANHXE9PGG2 379 aa18.23■□□□□ 0.51
SPSB3-202ENST00000563668 MOSPD3O75425 235 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms