RNA–Protein interactions for RNA: ENST00000562136.1

HERC2-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 2

Gene HERC2, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-202ENST00000562136 PDCL2Q8N4E4 241 aa13.5□□□□□ -0.25
HERC2-202ENST00000562136 TRMT2BQ96GJ1 504 aaKnown RBP13.5□□□□□ -0.25
HERC2-202ENST00000562136 INTS4Q96HW7 963 aaKnown RBP13.5□□□□□ -0.25
HERC2-202ENST00000562136 ZFYVE19Q96K21 471 aa13.5□□□□□ -0.25
HERC2-202ENST00000562136 RBM12Q9NTZ6 932 aaKnown RBP13.5□□□□□ -0.25
HERC2-202ENST00000562136 C2orf42Q9NWW7 574 aa13.5□□□□□ -0.25
HERC2-202ENST00000562136 SIX4Q9UIU6 781 aa13.5□□□□□ -0.25
HERC2-202ENST00000562136 ITGA11Q9UKX5 1188 aa13.5□□□□□ -0.25
HERC2-202ENST00000562136 L1RE1Q9UN81 338 aa13.5□□□□□ -0.25
HERC2-202ENST00000562136 PCDHB5Q9Y5E4 795 aa13.5□□□□□ -0.25
HERC2-202ENST00000562136 VPS37CA5D8V6 355 aaPredicted RBP13.49□□□□□ -0.25
HERC2-202ENST00000562136 DPYSL4O14531 572 aa13.49□□□□□ -0.25
HERC2-202ENST00000562136 EXTL3O43909 919 aa13.49□□□□□ -0.25
HERC2-202ENST00000562136 NOL4O94818 638 aa13.49□□□□□ -0.25
HERC2-202ENST00000562136 ATXN1P54253 815 aaKnown RBP13.49□□□□□ -0.25
HERC2-202ENST00000562136 TNK2Q07912 1038 aa13.49□□□□□ -0.25
HERC2-202ENST00000562136 DMWDQ09019 674 aa13.49□□□□□ -0.25
HERC2-202ENST00000562136 ITPRIPL2Q3MIP1 535 aa13.49□□□□□ -0.25
HERC2-202ENST00000562136 CFAP221Q4G0U5 840 aa13.49□□□□□ -0.25
HERC2-202ENST00000562136 SCARA3Q6AZY7 606 aa13.49□□□□□ -0.25
HERC2-202ENST00000562136 CCDC73Q6ZRK6 1079 aa13.49□□□□□ -0.25
HERC2-202ENST00000562136 Q6ZS52 159 aa13.49□□□□□ -0.25
HERC2-202ENST00000562136 MON1AQ86VX9 555 aa13.49□□□□□ -0.25
HERC2-202ENST00000562136 LONP2Q86WA8 852 aa13.49□□□□□ -0.25
HERC2-202ENST00000562136 GPIHBP1Q8IV16 184 aa13.49□□□□□ -0.25
HERC2-202ENST00000562136 CACTINQ8WUQ7 758 aaKnown RBP13.49□□□□□ -0.25
HERC2-202ENST00000562136 USP13Q92995 863 aaPredicted RBP13.49□□□□□ -0.25
HERC2-202ENST00000562136 FAM213AQ9BRX8 229 aa13.49□□□□□ -0.25
HERC2-202ENST00000562136 FGFBP2Q9BYJ0 223 aa13.49□□□□□ -0.25
HERC2-202ENST00000562136 KIF9Q9HAQ2 790 aa13.49□□□□□ -0.25
HERC2-202ENST00000562136 HPS4Q9NQG7 708 aa13.49□□□□□ -0.25
HERC2-202ENST00000562136 THG1LQ9NWX6 298 aaKnown RBP13.49□□□□□ -0.25
HERC2-202ENST00000562136 LAMA1P25391 3075 aa13.49□□□□□ -0.25
HERC2-202ENST00000562136 CHD8Q9HCK8 2581 aa13.49□□□□□ -0.25
HERC2-202ENST00000562136 CCDC163A0A0D9SF12 145 aa13.48□□□□□ -0.25
HERC2-202ENST00000562136 OTOL1A6NHN0 477 aaPredicted RBP13.48□□□□□ -0.25
HERC2-202ENST00000562136 TRDMT1O14717 391 aaKnown RBP13.48□□□□□ -0.25
HERC2-202ENST00000562136 KIAA0391O15091 583 aaKnown RBP13.48□□□□□ -0.25
HERC2-202ENST00000562136 TADA3O75528 432 aa13.48□□□□□ -0.25
HERC2-202ENST00000562136 ITGB3P05106 788 aa13.48□□□□□ -0.25
HERC2-202ENST00000562136 CENPBP07199 599 aaPredicted RBP13.48□□□□□ -0.25
HERC2-202ENST00000562136 CSH1P0DML2 217 aa13.48□□□□□ -0.25
HERC2-202ENST00000562136 CSH2P0DML3 217 aa13.48□□□□□ -0.25
HERC2-202ENST00000562136 POLR2BP30876 1174 aaKnown RBP13.48□□□□□ -0.25
HERC2-202ENST00000562136 TXLNAP40222 546 aa13.48□□□□□ -0.25
HERC2-202ENST00000562136 NASPP49321 788 aaPredicted RBP13.48□□□□□ -0.25
HERC2-202ENST00000562136 TSPY1Q01534 308 aa13.48□□□□□ -0.25
HERC2-202ENST00000562136 PON2Q15165 354 aa13.48□□□□□ -0.25
HERC2-202ENST00000562136 TMEM196Q5HYL7 178 aa13.48□□□□□ -0.25
HERC2-202ENST00000562136 INTS6LQ5JSJ4 861 aaKnown RBP13.48□□□□□ -0.25
HERC2-202ENST00000562136 FAM173BQ6P4H8 233 aa13.48□□□□□ -0.25
HERC2-202ENST00000562136 CNNM4Q6P4Q7 775 aa13.48□□□□□ -0.25
HERC2-202ENST00000562136 FAM171BQ6P995 826 aa13.48□□□□□ -0.25
HERC2-202ENST00000562136 DPH6Q7L8W6 267 aa13.48□□□□□ -0.25
HERC2-202ENST00000562136 WDR5BQ86VZ2 330 aa13.48□□□□□ -0.25
HERC2-202ENST00000562136 TOP6BLQ8N6T0 577 aa13.48□□□□□ -0.25
HERC2-202ENST00000562136 RIN3Q8TB24 985 aa13.48□□□□□ -0.25
HERC2-202ENST00000562136 FAM200AQ8TCP9 573 aa13.48□□□□□ -0.25
HERC2-202ENST00000562136 GIPC2Q8TF65 315 aa13.48□□□□□ -0.25
HERC2-202ENST00000562136 FUBP3Q96I24 572 aaKnown RBP eCLIP13.48□□□□□ -0.25
HERC2-202ENST00000562136 GCNAQ96QF7 691 aa13.48□□□□□ -0.25
HERC2-202ENST00000562136 CBWD1Q9BRT8 395 aa13.48□□□□□ -0.25
HERC2-202ENST00000562136 GKN1Q9NS71 199 aa13.48□□□□□ -0.25
HERC2-202ENST00000562136 TDP1Q9NUW8 608 aa13.48□□□□□ -0.25
HERC2-202ENST00000562136 ABI2Q9NYB9 513 aaPredicted RBP13.48□□□□□ -0.25
HERC2-202ENST00000562136 RBAKQ9NYW8 714 aaPredicted RBP13.48□□□□□ -0.25
HERC2-202ENST00000562136 GMEB2Q9UKD1 530 aa13.48□□□□□ -0.25
HERC2-202ENST00000562136 AGAP1Q9UPQ3 857 aa13.48□□□□□ -0.25
HERC2-202ENST00000562136 MTMR6Q9Y217 621 aa13.48□□□□□ -0.25
HERC2-202ENST00000562136 CCL26Q9Y258 94 aa13.48□□□□□ -0.25
HERC2-202ENST00000562136 CACNA1BQ00975 2339 aa13.48□□□□□ -0.25
HERC2-202ENST00000562136 CHURC1-FNTBB4DL54 471 aa13.47□□□□□ -0.25
HERC2-202ENST00000562136 HUS1O60921 280 aa13.47□□□□□ -0.25
HERC2-202ENST00000562136 GCNT3O95395 438 aa13.47□□□□□ -0.25
HERC2-202ENST00000562136 TCF3P15923 654 aa13.47□□□□□ -0.25
HERC2-202ENST00000562136 HOXD13P35453 343 aa13.47□□□□□ -0.25
HERC2-202ENST00000562136 MAGEA11P43364 429 aa13.47□□□□□ -0.25
HERC2-202ENST00000562136 LHX1P48742 406 aa13.47□□□□□ -0.25
HERC2-202ENST00000562136 FNTBP49356 437 aa13.47□□□□□ -0.25
HERC2-202ENST00000562136 RBP5P82980 135 aa13.47□□□□□ -0.25
HERC2-202ENST00000562136 TFAMQ00059 246 aaKnown RBP13.47□□□□□ -0.25
HERC2-202ENST00000562136 RUNX3Q13761 415 aa13.47□□□□□ -0.25
HERC2-202ENST00000562136 E2F4Q16254 413 aa13.47□□□□□ -0.25
HERC2-202ENST00000562136 SOWAHAQ2M3V2 549 aa13.47□□□□□ -0.25
HERC2-202ENST00000562136 OSTM1Q86WC4 334 aa13.47□□□□□ -0.25
HERC2-202ENST00000562136 SAAL1Q96ER3 474 aa13.47□□□□□ -0.25
HERC2-202ENST00000562136 CEP295NLQ96MC4 621 aa13.47□□□□□ -0.25
HERC2-202ENST00000562136 USP28Q96RU2 1077 aa13.47□□□□□ -0.25
HERC2-202ENST00000562136 RTKNQ9BST9 563 aa13.47□□□□□ -0.25
HERC2-202ENST00000562136 PI4K2AQ9BTU6 479 aa13.47□□□□□ -0.25
HERC2-202ENST00000562136 SMG9Q9H0W8 520 aaKnown RBP13.47□□□□□ -0.25
HERC2-202ENST00000562136 TMEM206Q9H813 350 aa13.47□□□□□ -0.25
HERC2-202ENST00000562136 INTS13Q9NVM9 706 aa13.47□□□□□ -0.25
HERC2-202ENST00000562136 KBTBD4Q9NVX7 518 aa13.47□□□□□ -0.25
HERC2-202ENST00000562136 DDX43Q9NXZ2 648 aaKnown RBP13.47□□□□□ -0.25
HERC2-202ENST00000562136 TBC1D7Q9P0N9 293 aa13.47□□□□□ -0.25
HERC2-202ENST00000562136 UXTQ9UBK9 157 aaPredicted RBP13.47□□□□□ -0.25
HERC2-202ENST00000562136 PRPF40AO75400 957 aaKnown RBP13.46□□□□□ -0.25
HERC2-202ENST00000562136 CYP2F1P24903 491 aa13.46□□□□□ -0.25
HERC2-202ENST00000562136 AVPR1AP37288 418 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms