RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 CYB561D2O14569 222 aa9.06□□□□□ -0.96
PALB2-202ENST00000561514 TRDMT1O14717 391 aaKnown RBP9.06□□□□□ -0.96
PALB2-202ENST00000561514 RIOK3O14730 519 aaKnown RBP9.06□□□□□ -0.96
PALB2-202ENST00000561514 TBCAO75347 108 aaKnown RBP9.06□□□□□ -0.96
PALB2-202ENST00000561514 TADA3O75528 432 aa9.06□□□□□ -0.96
PALB2-202ENST00000561514 AKAP3O75969 853 aa9.06□□□□□ -0.96
PALB2-202ENST00000561514 NOL4O94818 638 aa9.06□□□□□ -0.96
PALB2-202ENST00000561514 IL18RAPO95256 599 aa9.06□□□□□ -0.96
PALB2-202ENST00000561514 NMT1P30419 496 aaKnown RBP9.06□□□□□ -0.96
PALB2-202ENST00000561514 MATR3P43243 847 aaKnown RBP eCLIP9.06□□□□□ -0.96
PALB2-202ENST00000561514 RAP1GAPP47736 663 aa9.06□□□□□ -0.96
PALB2-202ENST00000561514 ACOT2P49753 483 aa9.06□□□□□ -0.96
PALB2-202ENST00000561514 NLRP12P59046 1061 aa9.06□□□□□ -0.96
PALB2-202ENST00000561514 CYP4F8P98187 520 aa9.06□□□□□ -0.96
PALB2-202ENST00000561514 TNK2Q07912 1038 aa9.06□□□□□ -0.96
PALB2-202ENST00000561514 SIM2Q14190 667 aaPredicted RBP9.06□□□□□ -0.96
PALB2-202ENST00000561514 KARSQ15046 597 aaKnown RBP9.06□□□□□ -0.96
PALB2-202ENST00000561514 PON2Q15165 354 aa9.06□□□□□ -0.96
PALB2-202ENST00000561514 ITPRIPL2Q3MIP1 535 aa9.06□□□□□ -0.96
PALB2-202ENST00000561514 WSCD1Q658N2 575 aa9.06□□□□□ -0.96
PALB2-202ENST00000561514 ZNF720Q7Z2F6 126 aa9.06□□□□□ -0.96
PALB2-202ENST00000561514 LIMS2Q7Z4I7 341 aa9.06□□□□□ -0.96
PALB2-202ENST00000561514 BRSK2Q8IWQ3 736 aa9.06□□□□□ -0.96
PALB2-202ENST00000561514 TRMT2BQ96GJ1 504 aaKnown RBP9.06□□□□□ -0.96
PALB2-202ENST00000561514 ZFYVE19Q96K21 471 aa9.06□□□□□ -0.96
PALB2-202ENST00000561514 MYRFLQ96LU7 910 aa9.06□□□□□ -0.96
PALB2-202ENST00000561514 CNTNAP3BQ96NU0 1288 aa9.06□□□□□ -0.96
PALB2-202ENST00000561514 SEPT5Q99719 369 aaPredicted RBP9.06□□□□□ -0.96
PALB2-202ENST00000561514 CNTNAP3Q9BZ76 1288 aa9.06□□□□□ -0.96
PALB2-202ENST00000561514 DPP3Q9NY33 737 aa9.06□□□□□ -0.96
PALB2-202ENST00000561514 SEL1LQ9UBV2 794 aa9.06□□□□□ -0.96
PALB2-202ENST00000561514 STK17AQ9UEE5 414 aa9.06□□□□□ -0.96
PALB2-202ENST00000561514 AGO2Q9UKV8 859 aaKnown RBP9.06□□□□□ -0.96
PALB2-202ENST00000561514 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.06□□□□□ -0.96
PALB2-202ENST00000561514 DCDC2BA2VCK2 349 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 OTOL1A6NHN0 477 aaPredicted RBP9.05□□□□□ -0.96
PALB2-202ENST00000561514 KPNA7A9QM74 516 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 H3BQV1 296 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 TM4SF5O14894 197 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 EPN2O95208 641 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 TCF3P15923 654 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 DDIT3P35638 169 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 PNPLA4P41247 253 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 WNT7BP56706 349 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 USP4Q13107 963 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 SRSF5Q13243 272 aaKnown RBP9.05□□□□□ -0.96
PALB2-202ENST00000561514 POSTNQ15063 836 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 PTPAQ15257 358 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 LPAL2Q16609 132 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 NFE2Q16621 373 aaPredicted RBP9.05□□□□□ -0.96
PALB2-202ENST00000561514 MGAT5BQ3V5L5 792 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 SV2CQ496J9 727 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 CFAP221Q4G0U5 840 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 ZC2HC1CQ53FD0 456 aaPredicted RBP9.05□□□□□ -0.96
PALB2-202ENST00000561514 PLA2G2CQ5R387 149 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 ADALQ6DHV7 355 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 FSTL4Q6MZW2 842 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 PKN3Q6P5Z2 889 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 MON1AQ86VX9 555 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 METTL23Q86XA0 190 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 SFR1Q86XK3 245 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 DCP1BQ8IZD4 617 aaKnown RBP9.05□□□□□ -0.96
PALB2-202ENST00000561514 THEM5Q8N1Q8 247 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 FAM160A2Q8N612 972 aaPredicted RBP9.05□□□□□ -0.96
PALB2-202ENST00000561514 LRRC52Q8N7C0 313 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 RIN3Q8TB24 985 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 GAB3Q8WWW8 586 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 USP13Q92995 863 aaPredicted RBP9.05□□□□□ -0.96
PALB2-202ENST00000561514 DNAJC19Q96DA6 116 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 ZNF560Q96MR9 790 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 GCNAQ96QF7 691 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 ACBD6Q9BR61 282 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 PYM1Q9BRP8 204 aaKnown RBP9.05□□□□□ -0.96
PALB2-202ENST00000561514 OLFML3Q9NRN5 406 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 TMLHEQ9NVH6 421 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 THG1LQ9NWX6 298 aaKnown RBP9.05□□□□□ -0.96
PALB2-202ENST00000561514 GDAP2Q9NXN4 497 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 CCL26Q9Y258 94 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 PCDHB5Q9Y5E4 795 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 TICRRQ7Z2Z1 1910 aa9.05□□□□□ -0.96
PALB2-202ENST00000561514 GABRDO14764 452 aa9.04□□□□□ -0.96
PALB2-202ENST00000561514 EXTL3O43909 919 aa9.04□□□□□ -0.96
PALB2-202ENST00000561514 CSH1P0DML2 217 aa9.04□□□□□ -0.96
PALB2-202ENST00000561514 CSH2P0DML3 217 aa9.04□□□□□ -0.96
PALB2-202ENST00000561514 GAP43P17677 238 aa9.04□□□□□ -0.96
PALB2-202ENST00000561514 GARTP22102 1010 aa9.04□□□□□ -0.96
PALB2-202ENST00000561514 HOXC13P31276 330 aa9.04□□□□□ -0.96
PALB2-202ENST00000561514 RUNX3Q13761 415 aa9.04□□□□□ -0.96
PALB2-202ENST00000561514 PDGFRLQ15198 375 aa9.04□□□□□ -0.96
PALB2-202ENST00000561514 ZNF77Q15935 545 aa9.04□□□□□ -0.96
PALB2-202ENST00000561514 PRR23BQ6ZRT6 265 aa9.04□□□□□ -0.96
PALB2-202ENST00000561514 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.04□□□□□ -0.96
PALB2-202ENST00000561514 TMEM86AQ8N2M4 240 aa9.04□□□□□ -0.96
PALB2-202ENST00000561514 PDCL2Q8N4E4 241 aa9.04□□□□□ -0.96
PALB2-202ENST00000561514 CAMKK1Q8N5S9 505 aa9.04□□□□□ -0.96
PALB2-202ENST00000561514 KIAA1958Q8N8K9 716 aa9.04□□□□□ -0.96
PALB2-202ENST00000561514 C1orf127Q8N9H9 656 aa9.04□□□□□ -0.96
PALB2-202ENST00000561514 FAM200AQ8TCP9 573 aa9.04□□□□□ -0.96
PALB2-202ENST00000561514 DDX1Q92499 740 aaKnown RBP9.04□□□□□ -0.96
PALB2-202ENST00000561514 FUBP3Q96I24 572 aaKnown RBP eCLIP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms