RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 CYB561D2O14569 222 aa18.12■□□□□ 0.49
HDDC3-206ENST00000561036 H2AFXP16104 143 aaPredicted RBP18.12■□□□□ 0.49
HDDC3-206ENST00000561036 MCM3P25205 808 aa18.12■□□□□ 0.49
HDDC3-206ENST00000561036 PEX5P50542 639 aa18.12■□□□□ 0.49
HDDC3-206ENST00000561036 SCNN1GP51170 649 aa18.12■□□□□ 0.49
HDDC3-206ENST00000561036 PTPN20Q4JDL3 420 aa18.12■□□□□ 0.49
HDDC3-206ENST00000561036 GLE1Q53GS7 698 aaKnown RBP18.12■□□□□ 0.49
HDDC3-206ENST00000561036 PPP1R15BQ5SWA1 713 aa18.12■□□□□ 0.49
HDDC3-206ENST00000561036 ACOT1Q86TX2 421 aa18.12■□□□□ 0.49
HDDC3-206ENST00000561036 ADGRF2Q8IZF7 708 aa18.12■□□□□ 0.49
HDDC3-206ENST00000561036 STK32AQ8WU08 396 aa18.12■□□□□ 0.49
HDDC3-206ENST00000561036 BTBD6Q96KE9 485 aa18.12■□□□□ 0.49
HDDC3-206ENST00000561036 HESX1Q9UBX0 185 aa18.12■□□□□ 0.49
HDDC3-206ENST00000561036 TMEM59LQ9UK28 342 aa18.12■□□□□ 0.49
HDDC3-206ENST00000561036 TSPAN16Q9UKR8 245 aa18.12■□□□□ 0.49
HDDC3-206ENST00000561036 PARNO95453 639 aaKnown RBP18.11■□□□□ 0.49
HDDC3-206ENST00000561036 AARSP49588 968 aaKnown RBP eCLIP18.11■□□□□ 0.49
HDDC3-206ENST00000561036 PDCLQ13371 301 aa18.11■□□□□ 0.49
HDDC3-206ENST00000561036 TUSC3Q13454 348 aa18.11■□□□□ 0.49
HDDC3-206ENST00000561036 GOLGA7BQ2TAP0 167 aa18.11■□□□□ 0.49
HDDC3-206ENST00000561036 PKDCCQ504Y2 493 aa18.11■□□□□ 0.49
HDDC3-206ENST00000561036 C2CD6Q53TS8 623 aa18.11■□□□□ 0.49
HDDC3-206ENST00000561036 PDCL2Q8N4E4 241 aa18.11■□□□□ 0.49
HDDC3-206ENST00000561036 IPO4Q8TEX9 1081 aaKnown RBP18.11■□□□□ 0.49
HDDC3-206ENST00000561036 PLVAPQ9BX97 442 aa18.11■□□□□ 0.49
HDDC3-206ENST00000561036 PARD6BQ9BYG5 372 aa18.11■□□□□ 0.49
HDDC3-206ENST00000561036 CRISPLD2Q9H0B8 497 aa18.11■□□□□ 0.49
HDDC3-206ENST00000561036 SYNCQ9H7C4 482 aa18.11■□□□□ 0.49
HDDC3-206ENST00000561036 ANKZF1Q9H8Y5 726 aa18.11■□□□□ 0.49
HDDC3-206ENST00000561036 CYTH4Q9UIA0 394 aa18.11■□□□□ 0.49
HDDC3-206ENST00000561036 RAB21Q9UL25 225 aa18.11■□□□□ 0.49
HDDC3-206ENST00000561036 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.11■□□□□ 0.49
HDDC3-206ENST00000561036 CCDC188H7C350 402 aa18.1■□□□□ 0.49
HDDC3-206ENST00000561036 GABRDO14764 452 aa18.1■□□□□ 0.49
HDDC3-206ENST00000561036 FGFR1P11362 822 aa18.1■□□□□ 0.49
HDDC3-206ENST00000561036 LHX1P48742 406 aa18.1■□□□□ 0.49
HDDC3-206ENST00000561036 RWDD2BP57060 319 aa18.1■□□□□ 0.49
HDDC3-206ENST00000561036 PSMC1P62191 440 aaKnown RBP18.1■□□□□ 0.49
HDDC3-206ENST00000561036 C2orf54Q08AI8 447 aa18.1■□□□□ 0.49
HDDC3-206ENST00000561036 PIGHQ14442 188 aaPredicted RBP18.1■□□□□ 0.49
HDDC3-206ENST00000561036 BRD3Q15059 726 aa18.1■□□□□ 0.49
HDDC3-206ENST00000561036 PPP2R5EQ16537 467 aa18.1■□□□□ 0.49
HDDC3-206ENST00000561036 PTPROQ16827 1216 aa18.1■□□□□ 0.49
HDDC3-206ENST00000561036 UPP1Q16831 310 aa18.1■□□□□ 0.49
HDDC3-206ENST00000561036 DCUN1D2Q6PH85 259 aa18.1■□□□□ 0.49
HDDC3-206ENST00000561036 GLB1LQ6UWU2 654 aa18.1■□□□□ 0.49
HDDC3-206ENST00000561036 ANKRD33Q7Z3H0 272 aa18.1■□□□□ 0.49
HDDC3-206ENST00000561036 MTERF4Q7Z6M4 381 aaKnown RBP18.1■□□□□ 0.49
HDDC3-206ENST00000561036 PHLDB2Q86SQ0 1253 aa18.1■□□□□ 0.49
HDDC3-206ENST00000561036 RTN4RL1Q86UN2 441 aaPredicted RBP18.1■□□□□ 0.49
HDDC3-206ENST00000561036 NIPA2Q8N8Q9 360 aa18.1■□□□□ 0.49
HDDC3-206ENST00000561036 RNF169Q8NCN4 708 aa18.1■□□□□ 0.49
HDDC3-206ENST00000561036 FNIP1Q8TF40 1166 aa18.1■□□□□ 0.49
HDDC3-206ENST00000561036 ALG3Q92685 438 aa18.1■□□□□ 0.49
HDDC3-206ENST00000561036 APBB2Q92870 758 aa18.1■□□□□ 0.49
HDDC3-206ENST00000561036 SENP8Q96LD8 212 aa18.1■□□□□ 0.49
HDDC3-206ENST00000561036 RNPC3Q96LT9 517 aaKnown RBP18.1■□□□□ 0.49
HDDC3-206ENST00000561036 CPXM1Q96SM3 734 aa18.1■□□□□ 0.49
HDDC3-206ENST00000561036 ELAC1Q9H777 363 aaKnown RBP18.1■□□□□ 0.49
HDDC3-206ENST00000561036 CYLDQ9NQC7 956 aa18.1■□□□□ 0.49
HDDC3-206ENST00000561036 NME7Q9Y5B8 376 aa18.1■□□□□ 0.49
HDDC3-206ENST00000561036 ARHGEF37A1IGU5 675 aa18.09■□□□□ 0.49
HDDC3-206ENST00000561036 PSTPIP1O43586 416 aa18.09■□□□□ 0.49
HDDC3-206ENST00000561036 PFKMP08237 780 aa18.09■□□□□ 0.49
HDDC3-206ENST00000561036 CLCNKBP51801 687 aa18.09■□□□□ 0.49
HDDC3-206ENST00000561036 AFF1P51825 1210 aaKnown RBP18.09■□□□□ 0.49
HDDC3-206ENST00000561036 PLEKHG4Q58EX7 1191 aa18.09■□□□□ 0.49
HDDC3-206ENST00000561036 PPP1R26Q5T8A7 1209 aaPredicted RBP18.09■□□□□ 0.49
HDDC3-206ENST00000561036 DCAF12L1Q5VU92 463 aa18.09■□□□□ 0.49
HDDC3-206ENST00000561036 C1orf53Q5VUE5 145 aa18.09■□□□□ 0.49
HDDC3-206ENST00000561036 LLGL2Q6P1M3 1020 aa18.09■□□□□ 0.49
HDDC3-206ENST00000561036 WDR93Q6P2C0 686 aa18.09■□□□□ 0.49
HDDC3-206ENST00000561036 XYLT1Q86Y38 959 aa18.09■□□□□ 0.49
HDDC3-206ENST00000561036 C12orf29Q8N999 325 aa18.09■□□□□ 0.49
HDDC3-206ENST00000561036 ANKRD52Q8NB46 1076 aa18.09■□□□□ 0.49
HDDC3-206ENST00000561036 UBA3Q8TBC4 463 aa18.09■□□□□ 0.49
HDDC3-206ENST00000561036 KRT35Q92764 455 aa18.09■□□□□ 0.49
HDDC3-206ENST00000561036 MCRS1Q96EZ8 462 aa18.09■□□□□ 0.49
HDDC3-206ENST00000561036 TOX2Q96NM4 488 aa18.09■□□□□ 0.49
HDDC3-206ENST00000561036 SLC4A5Q9BY07 1137 aa18.09■□□□□ 0.49
HDDC3-206ENST00000561036 TRIM7Q9C029 511 aa18.09■□□□□ 0.49
HDDC3-206ENST00000561036 RBM12Q9NTZ6 932 aaKnown RBP18.09■□□□□ 0.49
HDDC3-206ENST00000561036 SMARCAL1Q9NZC9 954 aa18.09■□□□□ 0.49
HDDC3-206ENST00000561036 EHD2Q9NZN4 543 aa18.09■□□□□ 0.49
HDDC3-206ENST00000561036 KANSL3Q9P2N6 904 aa18.09■□□□□ 0.49
HDDC3-206ENST00000561036 POMCP01189 267 aa18.08■□□□□ 0.48
HDDC3-206ENST00000561036 ERBB2P04626 1255 aa18.08■□□□□ 0.48
HDDC3-206ENST00000561036 RHOXF2BP0C7M4 288 aa18.08■□□□□ 0.48
HDDC3-206ENST00000561036 KRT3P12035 628 aa18.08■□□□□ 0.48
HDDC3-206ENST00000561036 LMO2P25791 158 aa18.08■□□□□ 0.48
HDDC3-206ENST00000561036 BCAT1P54687 386 aa18.08■□□□□ 0.48
HDDC3-206ENST00000561036 CYP4A22Q5TCH4 519 aa18.08■□□□□ 0.48
HDDC3-206ENST00000561036 SEL1L2Q5TEA6 688 aa18.08■□□□□ 0.48
HDDC3-206ENST00000561036 LRRC38Q5VT99 294 aa18.08■□□□□ 0.48
HDDC3-206ENST00000561036 DCLRE1AQ6PJP8 1040 aa18.08■□□□□ 0.48
HDDC3-206ENST00000561036 DSTYKQ6XUX3 929 aa18.08■□□□□ 0.48
HDDC3-206ENST00000561036 CTU1Q7Z7A3 348 aaKnown RBP18.08■□□□□ 0.48
HDDC3-206ENST00000561036 OSTM1Q86WC4 334 aa18.08■□□□□ 0.48
HDDC3-206ENST00000561036 RHOT1Q8IXI2 618 aa18.08■□□□□ 0.48
HDDC3-206ENST00000561036 B3GALNT2Q8NCR0 500 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms