RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 C3orf70A6NLC5 250 aaPredicted RBP10.58□□□□□ -0.72
LRRC28-216ENST00000559819 CXCL8P10145 99 aa10.58□□□□□ -0.72
LRRC28-216ENST00000559819 EFNA5P52803 228 aa10.58□□□□□ -0.72
LRRC28-216ENST00000559819 AP3M2P53677 418 aa10.58□□□□□ -0.72
LRRC28-216ENST00000559819 WDR4P57081 412 aaKnown RBP10.58□□□□□ -0.72
LRRC28-216ENST00000559819 LACTBP83111 547 aaPredicted RBP10.58□□□□□ -0.72
LRRC28-216ENST00000559819 TFDP3Q5H9I0 405 aa10.58□□□□□ -0.72
LRRC28-216ENST00000559819 RNASEH2BQ5TBB1 312 aaKnown RBP10.58□□□□□ -0.72
LRRC28-216ENST00000559819 TBC1D1Q86TI0 1168 aaPredicted RBP10.58□□□□□ -0.72
LRRC28-216ENST00000559819 RELL1Q8IUW5 271 aa10.58□□□□□ -0.72
LRRC28-216ENST00000559819 FBXO16Q8IX29 292 aaPredicted RBP10.58□□□□□ -0.72
LRRC28-216ENST00000559819 ZBED8Q8IZ13 594 aa10.58□□□□□ -0.72
LRRC28-216ENST00000559819 SGSM3Q96HU1 749 aa10.58□□□□□ -0.72
LRRC28-216ENST00000559819 TWNKQ96RR1 684 aa10.58□□□□□ -0.72
LRRC28-216ENST00000559819 CCDC77Q9BR77 488 aa10.58□□□□□ -0.72
LRRC28-216ENST00000559819 NKIRAS1Q9NYS0 192 aa10.58□□□□□ -0.72
LRRC28-216ENST00000559819 PNMA3Q9UL41 463 aa10.58□□□□□ -0.72
LRRC28-216ENST00000559819 BRCA1P38398 1863 aaKnown RBP10.58□□□□□ -0.72
LRRC28-216ENST00000559819 CNMDO75829 334 aa10.58□□□□□ -0.72
LRRC28-216ENST00000559819 NRLP54845 237 aa10.58□□□□□ -0.72
LRRC28-216ENST00000559819 ELF3P78545 371 aaPredicted RBP10.58□□□□□ -0.72
LRRC28-216ENST00000559819 OTUD4Q01804 1114 aaKnown RBP10.58□□□□□ -0.72
LRRC28-216ENST00000559819 LMNB2Q03252 620 aa10.58□□□□□ -0.72
LRRC28-216ENST00000559819 PDIA2Q13087 525 aaKnown RBP10.58□□□□□ -0.72
LRRC28-216ENST00000559819 GRM1Q13255 1194 aa10.58□□□□□ -0.72
LRRC28-216ENST00000559819 EFTUD2Q15029 972 aaKnown RBP eCLIP10.58□□□□□ -0.72
LRRC28-216ENST00000559819 TAF5Q15542 800 aa10.58□□□□□ -0.72
LRRC28-216ENST00000559819 PKN2Q16513 984 aaKnown RBP10.58□□□□□ -0.72
LRRC28-216ENST00000559819 ATF7IP2Q5U623 682 aa10.58□□□□□ -0.72
LRRC28-216ENST00000559819 LRRC38Q5VT99 294 aa10.58□□□□□ -0.72
LRRC28-216ENST00000559819 ANKRD22Q5VYY1 191 aa10.58□□□□□ -0.72
LRRC28-216ENST00000559819 PPP1R2P3Q6NXS1 205 aa10.58□□□□□ -0.72
LRRC28-216ENST00000559819 SPATA21Q7Z572 469 aa10.58□□□□□ -0.72
LRRC28-216ENST00000559819 C4orf33Q8N1A6 199 aa10.58□□□□□ -0.72
LRRC28-216ENST00000559819 CCDC63Q8NA47 563 aa10.58□□□□□ -0.72
LRRC28-216ENST00000559819 SPOCK2Q92563 424 aa10.58□□□□□ -0.72
LRRC28-216ENST00000559819 RMDN2Q96LZ7 410 aa10.58□□□□□ -0.72
LRRC28-216ENST00000559819 FGD4Q96M96 766 aa10.58□□□□□ -0.72
LRRC28-216ENST00000559819 CFAP57Q96MR6 1250 aa10.58□□□□□ -0.72
LRRC28-216ENST00000559819 SMYD3Q9H7B4 428 aa10.58□□□□□ -0.72
LRRC28-216ENST00000559819 METTL5Q9NRN9 209 aaKnown RBP10.58□□□□□ -0.72
LRRC28-216ENST00000559819 PCSK1NQ9UHG2 260 aa10.58□□□□□ -0.72
LRRC28-216ENST00000559819 AGTPBP1Q9UPW5 1226 aa10.58□□□□□ -0.72
LRRC28-216ENST00000559819 ADM5C9JUS6 153 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 PIK3R2O00459 728 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 NOP56O00567 594 aaKnown RBP10.57□□□□□ -0.72
LRRC28-216ENST00000559819 LRCH4O75427 683 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 TNNC2P02585 160 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 ERBB2P04626 1255 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 NFICP08651 508 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 ABHD2P08910 425 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 IQCF3P0C7M6 154 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 TAC1P20366 129 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 CDH5P33151 784 aaPredicted RBP10.57□□□□□ -0.72
LRRC28-216ENST00000559819 PSMC1P62191 440 aaKnown RBP10.57□□□□□ -0.72
LRRC28-216ENST00000559819 SLC25A11Q02978 314 aaKnown RBP10.57□□□□□ -0.72
LRRC28-216ENST00000559819 MGAT5Q09328 741 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 PIGHQ14442 188 aaPredicted RBP10.57□□□□□ -0.72
LRRC28-216ENST00000559819 SNCBQ16143 134 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 MPZL3Q6UWV2 235 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 ACTL9Q8TC94 416 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 ANKRD36BP1Q96IX9 119 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 CPXM1Q96SM3 734 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 ELP3Q9H9T3 547 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 SIX4Q9UIU6 781 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 PCDHGC3Q9UN70 934 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 KRT3P12035 628 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 PROZP22891 400 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 EIF4BP23588 611 aaKnown RBP10.57□□□□□ -0.72
LRRC28-216ENST00000559819 NCALDP61601 193 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 KCNJ2P63252 427 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 IGBP1P78318 339 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 DRICH1Q6PGQ1 229 aaPredicted RBP10.57□□□□□ -0.72
LRRC28-216ENST00000559819 ARHGEF18Q6ZSZ5 1173 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 DPH6Q7L8W6 267 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 TRABD2AQ86V40 505 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 TCP11Q8WWU5 503 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 PRCCQ92733 491 aaPredicted RBP10.57□□□□□ -0.72
LRRC28-216ENST00000559819 MAGEB18Q96M61 343 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 CDT1Q9H211 546 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 ECT2Q9H8V3 914 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 PTPRHQ9HD43 1115 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 TXNRD2Q9NNW7 524 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 DDX56Q9NY93 547 aaKnown RBP10.57□□□□□ -0.72
LRRC28-216ENST00000559819 GRID1Q9ULK0 1009 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 DRG1Q9Y295 367 aaKnown RBP10.57□□□□□ -0.72
LRRC28-216ENST00000559819 CEP83Q9Y592 693 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 LTBP3Q9NS15 1303 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 IGKV6-21A0A0C4DH24 114 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 A0A1W2PPM1 405 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 TCRBV7S3A2A0A539 114 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 IRF6O14896 467 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 CST8O60676 142 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 SUN1O94901 812 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 GSTA1P08263 222 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 RAD23BP54727 409 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 CCDC142Q17RM4 750 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 MSS51Q4VC12 460 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 RAB6CQ53S08 254 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 FNBP1LQ5T0N5 605 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms