RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 FGFR4P22455 802 aa13.11□□□□□ -0.31
CASC4-208ENST00000559151 CPT1AP50416 773 aa13.11□□□□□ -0.31
CASC4-208ENST00000559151 ZNF134P52741 427 aa13.11□□□□□ -0.31
CASC4-208ENST00000559151 LILRA4P59901 499 aa13.11□□□□□ -0.31
CASC4-208ENST00000559151 RAB30Q15771 203 aa13.11□□□□□ -0.31
CASC4-208ENST00000559151 ZNF280BQ86YH2 543 aa13.11□□□□□ -0.31
CASC4-208ENST00000559151 CACNA2D3Q8IZS8 1091 aa13.11□□□□□ -0.31
CASC4-208ENST00000559151 RNPEPQ9H4A4 650 aa13.11□□□□□ -0.31
CASC4-208ENST00000559151 XPNPEP3Q9NQH7 507 aa13.11□□□□□ -0.31
CASC4-208ENST00000559151 RGL1Q9NZL6 768 aa13.11□□□□□ -0.31
CASC4-208ENST00000559151 LRFN1Q9P244 771 aa13.11□□□□□ -0.31
CASC4-208ENST00000559151 GRHPRQ9UBQ7 328 aa13.11□□□□□ -0.31
CASC4-208ENST00000559151 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.11□□□□□ -0.31
CASC4-208ENST00000559151 RAD54BQ9Y620 910 aa13.11□□□□□ -0.31
CASC4-208ENST00000559151 A0A1B0GTW7 788 aa13.1□□□□□ -0.31
CASC4-208ENST00000559151 AQP12BA6NM10 295 aa13.1□□□□□ -0.31
CASC4-208ENST00000559151 SCNN1GP51170 649 aa13.1□□□□□ -0.31
CASC4-208ENST00000559151 HSD11B2P80365 405 aa13.1□□□□□ -0.31
CASC4-208ENST00000559151 MC2RQ01718 297 aa13.1□□□□□ -0.31
CASC4-208ENST00000559151 PRR16Q569H4 304 aa13.1□□□□□ -0.31
CASC4-208ENST00000559151 ZFYVE27Q5T4F4 411 aa13.1□□□□□ -0.31
CASC4-208ENST00000559151 FCRL6Q6DN72 434 aa13.1□□□□□ -0.31
CASC4-208ENST00000559151 KRT28Q7Z3Y7 464 aa13.1□□□□□ -0.31
CASC4-208ENST00000559151 POC1BQ8TC44 478 aa13.1□□□□□ -0.31
CASC4-208ENST00000559151 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.1□□□□□ -0.31
CASC4-208ENST00000559151 IGSF9Q9P2J2 1179 aa13.1□□□□□ -0.31
CASC4-208ENST00000559151 EIF2B4Q9UI10 523 aaKnown RBP13.1□□□□□ -0.31
CASC4-208ENST00000559151 GOLGA6L6A8MZA4 724 aa13.09□□□□□ -0.31
CASC4-208ENST00000559151 PATE3B3GLJ2 98 aa13.09□□□□□ -0.31
CASC4-208ENST00000559151 CCP110O43303 1012 aa13.09□□□□□ -0.31
CASC4-208ENST00000559151 ATXN1LP0C7T5 689 aaKnown RBP13.09□□□□□ -0.31
CASC4-208ENST00000559151 SPATA31D3P0C874 917 aa13.09□□□□□ -0.31
CASC4-208ENST00000559151 GCLCP48506 637 aaPredicted RBP13.09□□□□□ -0.31
CASC4-208ENST00000559151 COPAP53621 1224 aa13.09□□□□□ -0.31
CASC4-208ENST00000559151 BIRC3Q13489 604 aa13.09□□□□□ -0.31
CASC4-208ENST00000559151 ZIK1Q3SY52 487 aaPredicted RBP13.09□□□□□ -0.31
CASC4-208ENST00000559151 PLAG1Q6DJT9 500 aa13.09□□□□□ -0.31
CASC4-208ENST00000559151 MAMDC4Q6UXC1 1216 aa13.09□□□□□ -0.31
CASC4-208ENST00000559151 LCNL1Q6ZST4 164 aa13.09□□□□□ -0.31
CASC4-208ENST00000559151 SPATA31D4Q6ZUB0 917 aa13.09□□□□□ -0.31
CASC4-208ENST00000559151 USP49Q70CQ1 688 aa13.09□□□□□ -0.31
CASC4-208ENST00000559151 KCTD20Q7Z5Y7 419 aa13.09□□□□□ -0.31
CASC4-208ENST00000559151 LTV1Q96GA3 475 aaPredicted RBP13.09□□□□□ -0.31
CASC4-208ENST00000559151 TEX101Q9BY14 249 aa13.09□□□□□ -0.31
CASC4-208ENST00000559151 ZCCHC4Q9H5U6 513 aa13.09□□□□□ -0.31
CASC4-208ENST00000559151 SHOC2Q9UQ13 582 aa13.09□□□□□ -0.31
CASC4-208ENST00000559151 INMTO95050 263 aa13.08□□□□□ -0.32
CASC4-208ENST00000559151 ACO1P21399 889 aaKnown RBP13.08□□□□□ -0.32
CASC4-208ENST00000559151 PTDSS1P48651 473 aaKnown RBP13.08□□□□□ -0.32
CASC4-208ENST00000559151 MAN2A2P49641 1150 aa13.08□□□□□ -0.32
CASC4-208ENST00000559151 ITGA8P53708 1063 aa13.08□□□□□ -0.32
CASC4-208ENST00000559151 OCA2Q04671 838 aa13.08□□□□□ -0.32
CASC4-208ENST00000559151 KRT17Q04695 432 aa13.08□□□□□ -0.32
CASC4-208ENST00000559151 SPARCL1Q14515 664 aa13.08□□□□□ -0.32
CASC4-208ENST00000559151 NPY5RQ15761 445 aa13.08□□□□□ -0.32
CASC4-208ENST00000559151 PDCD4Q53EL6 469 aaKnown RBP13.08□□□□□ -0.32
CASC4-208ENST00000559151 CRTC1Q6UUV9 634 aa13.08□□□□□ -0.32
CASC4-208ENST00000559151 Q8TCH9 128 aa13.08□□□□□ -0.32
CASC4-208ENST00000559151 SNX27Q96L92 541 aa13.08□□□□□ -0.32
CASC4-208ENST00000559151 MAGEH1Q9H213 219 aa13.08□□□□□ -0.32
CASC4-208ENST00000559151 DHX36Q9H2U1 1008 aaKnown RBP13.08□□□□□ -0.32
CASC4-208ENST00000559151 DACT1Q9NYF0 836 aa13.08□□□□□ -0.32
CASC4-208ENST00000559151 SUN1O94901 812 aa13.07□□□□□ -0.32
CASC4-208ENST00000559151 TPH1P17752 444 aa13.07□□□□□ -0.32
CASC4-208ENST00000559151 INSCQ1MX18 579 aa13.07□□□□□ -0.32
CASC4-208ENST00000559151 LAYNQ6UX15 382 aa13.07□□□□□ -0.32
CASC4-208ENST00000559151 NECTIN3Q9NQS3 549 aa13.07□□□□□ -0.32
CASC4-208ENST00000559151 CAPN11Q9UMQ6 739 aa13.07□□□□□ -0.32
CASC4-208ENST00000559151 CHST2Q9Y4C5 530 aa13.07□□□□□ -0.32
CASC4-208ENST00000559151 SYT5O00445 386 aa13.06□□□□□ -0.32
CASC4-208ENST00000559151 ACKR2O00590 384 aa13.06□□□□□ -0.32
CASC4-208ENST00000559151 TOR1BO14657 336 aa13.06□□□□□ -0.32
CASC4-208ENST00000559151 GPANK1O95872 356 aa13.06□□□□□ -0.32
CASC4-208ENST00000559151 VEGFAP15692 232 aaPredicted RBP13.06□□□□□ -0.32
CASC4-208ENST00000559151 KCNA2P16389 499 aa13.06□□□□□ -0.32
CASC4-208ENST00000559151 LOXL3P58215 753 aa13.06□□□□□ -0.32
CASC4-208ENST00000559151 MGAT5BQ3V5L5 792 aa13.06□□□□□ -0.32
CASC4-208ENST00000559151 ARHGAP15Q53QZ3 475 aa13.06□□□□□ -0.32
CASC4-208ENST00000559151 CACHD1Q5VU97 1274 aa13.06□□□□□ -0.32
CASC4-208ENST00000559151 STYXQ8WUJ0 223 aa13.06□□□□□ -0.32
CASC4-208ENST00000559151 ISCA1Q9BUE6 129 aa13.06□□□□□ -0.32
CASC4-208ENST00000559151 GPR52Q9Y2T5 361 aa13.06□□□□□ -0.32
CASC4-208ENST00000559151 TRIM38O00635 465 aa13.05□□□□□ -0.32
CASC4-208ENST00000559151 PIP5K1BO14986 540 aa13.05□□□□□ -0.32
CASC4-208ENST00000559151 CYP27B1O15528 508 aa13.05□□□□□ -0.32
CASC4-208ENST00000559151 KCNQ3O43525 872 aa13.05□□□□□ -0.32
CASC4-208ENST00000559151 HIBADHP31937 336 aaKnown RBP13.05□□□□□ -0.32
CASC4-208ENST00000559151 KCNAB1Q14722 419 aa13.05□□□□□ -0.32
CASC4-208ENST00000559151 KIAA0408Q6ZU52 694 aa13.05□□□□□ -0.32
CASC4-208ENST00000559151 Q8NA96 180 aa13.05□□□□□ -0.32
CASC4-208ENST00000559151 ZNF384Q8TF68 577 aa13.05□□□□□ -0.32
CASC4-208ENST00000559151 FAM89AQ96GI7 184 aa13.05□□□□□ -0.32
CASC4-208ENST00000559151 MED15Q96RN5 788 aa13.05□□□□□ -0.32
CASC4-208ENST00000559151 DNMT3BQ9UBC3 853 aaKnown RBP13.05□□□□□ -0.32
CASC4-208ENST00000559151 DKK4Q9UBT3 224 aa13.05□□□□□ -0.32
CASC4-208ENST00000559151 CDY1Q9Y6F8 540 aa13.05□□□□□ -0.32
CASC4-208ENST00000559151 DIRC3C9JPN6 131 aa13.04□□□□□ -0.32
CASC4-208ENST00000559151 RRP9O43818 475 aaKnown RBP13.04□□□□□ -0.32
CASC4-208ENST00000559151 PPFIA4O75335 1185 aa13.04□□□□□ -0.32
CASC4-208ENST00000559151 ERN1O75460 977 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms