RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 LRCH3Q96II8 777 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 HEXIM2Q96MH2 286 aaKnown RBP7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 TWNKQ96RR1 684 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 GAS2L1Q99501 681 aaPredicted RBP7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 RTP3Q9BQQ7 232 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 MED10Q9BTT4 135 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 TTYH3Q9C0H2 523 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 ELOVL4Q9GZR5 314 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 ZCWPW1Q9H0M4 648 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 PDCL3Q9H2J4 239 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 TTYH1Q9H313 450 aaPredicted RBP7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 DPEP3Q9H4B8 488 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 PRDM12Q9H4Q4 367 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 RXFP1Q9HBX9 757 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 FAM49BQ9NUQ9 324 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 ZNHIT6Q9NWK9 470 aaKnown RBP7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 FNIP2Q9P278 1114 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 KIAA1257Q9ULG3 409 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 CAPN11Q9UMQ6 739 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 PCDHGC5Q9Y5F6 944 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 IRAK3Q9Y616 596 aa7.02□□□□□ -1.29
CHRNA3-204ENST00000559002 NLRC5Q86WI3 1866 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 SPDYE4A6NLX3 237 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 HIDE1A8MVS5 230 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 RNF225M0QZC1 329 aaPredicted RBP7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 CYP26A1O43174 497 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 THAP12O43422 761 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 MED7O43513 233 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 TBC1D4O60343 1298 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 LILRB3O75022 631 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 MFAP3LO75121 409 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 ATP2C2O75185 946 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 GLUD1P00367 558 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 CNPP09543 421 aaKnown RBP7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 VDRP11473 427 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 CCDC130P13994 396 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 BRD2P25440 801 aaKnown RBP7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 ADORA2BP29275 332 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 ELF1P32519 619 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 FXR1P51114 621 aaKnown RBP eCLIP7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 ZNF132P52740 706 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 RAD23BP54727 409 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 SLC8A3P57103 927 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 CYP27A1Q02318 531 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 SMARCB1Q12824 385 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 GPR17Q13304 367 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 CAMK1Q14012 370 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 RAB33AQ14088 237 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 GRIN2CQ14957 1233 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 STILQ15468 1287 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 TDRD12Q587J7 1177 aaKnown RBP7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 TPGS2Q68CL5 300 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 ELMSAN1Q6PJG2 1045 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 RSPO2Q6UXX9 243 aaPredicted RBP7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 PALB2Q86YC2 1186 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 CRYBG2Q8N1P7 616 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 MYCBPAPQ8TBZ2 947 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 SLC2A14Q8TDB8 520 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 C2orf15Q8WU43 125 aaKnown RBP7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 BAP1Q92560 729 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 FAM161BQ96MY7 647 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 KLHL5Q96PQ7 755 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 TMEM209Q96SK2 561 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 CLSTN3Q9BQT9 956 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 GPR88Q9GZN0 384 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 NSUN3Q9H649 340 aaKnown RBP7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 TLE6Q9H808 572 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 CRTAC1Q9NQ79 661 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 ABI2Q9NYB9 513 aaPredicted RBP7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 LMCD1Q9NZU5 365 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 IMPACTQ9P2X3 320 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 HESX1Q9UBX0 185 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 AFF4Q9UHB7 1163 aaKnown RBP7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 GTF3C4Q9UKN8 822 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 CNTN6Q9UQ52 1028 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 NME7Q9Y5B8 376 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 PCDHB5Q9Y5E4 795 aa7.01□□□□□ -1.29
CHRNA3-204ENST00000559002 TSC2P49815 1807 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 WDR27A2RRH5 827 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 MYBPHLA2RUH7 354 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 MTMR11A4FU01 709 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 M0QYV0 167 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 PRRG1O14668 218 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 ADAM12O43184 909 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 AP1G2O75843 785 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 FAM200BP0CF97 657 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 CYP11B1P15538 503 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 IGFBP4P22692 258 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 CLCN1P35523 988 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 NRIP1P48552 1158 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 CDR1P51861 262 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 ADKP55263 362 aaKnown RBP7□□□□□ -1.29
CHRNA3-204ENST00000559002 GSDMDP57764 484 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 ADCY1Q08828 1119 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 GOLGA8FQ08AF8 430 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 GOLGA8DPQ0D2H9 430 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 KLHL30Q0D2K2 578 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 TBX2Q13207 712 aaPredicted RBP7□□□□□ -1.29
CHRNA3-204ENST00000559002 CCDC142Q17RM4 750 aa7□□□□□ -1.29
CHRNA3-204ENST00000559002 GOLGA7BQ2TAP0 167 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms