RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 STK39Q9UEW8 545 aa19.21■□□□□ 0.67
CLPX-203ENST00000558958 PYCARDQ9ULZ3 195 aa19.21■□□□□ 0.67
CLPX-203ENST00000558958 PCDHGC3Q9UN70 934 aa19.21■□□□□ 0.67
CLPX-203ENST00000558958 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.21■□□□□ 0.67
CLPX-203ENST00000558958 RWDD3Q9Y3V2 267 aa19.21■□□□□ 0.67
CLPX-203ENST00000558958 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.2■□□□□ 0.66
CLPX-203ENST00000558958 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.2■□□□□ 0.66
CLPX-203ENST00000558958 ZNF263O14978 683 aa19.2■□□□□ 0.66
CLPX-203ENST00000558958 ARHGEF15O94989 841 aa19.2■□□□□ 0.66
CLPX-203ENST00000558958 KRT17Q04695 432 aa19.2■□□□□ 0.66
CLPX-203ENST00000558958 STILQ15468 1287 aa19.2■□□□□ 0.66
CLPX-203ENST00000558958 INTS6LQ5JSJ4 861 aaKnown RBP19.2■□□□□ 0.66
CLPX-203ENST00000558958 PPP1R26Q5T8A7 1209 aaPredicted RBP19.2■□□□□ 0.66
CLPX-203ENST00000558958 ZNF280DQ6N043 979 aa19.2■□□□□ 0.66
CLPX-203ENST00000558958 FAM171BQ6P995 826 aa19.2■□□□□ 0.66
CLPX-203ENST00000558958 LCLAT1Q6UWP7 414 aa19.2■□□□□ 0.66
CLPX-203ENST00000558958 TOGARAM2Q6ZUX3 1019 aa19.2■□□□□ 0.66
CLPX-203ENST00000558958 ANKS3Q6ZW76 656 aa19.2■□□□□ 0.66
CLPX-203ENST00000558958 KLHL23Q8NBE8 558 aa19.2■□□□□ 0.66
CLPX-203ENST00000558958 PKMYT1Q99640 499 aa19.2■□□□□ 0.66
CLPX-203ENST00000558958 PLVAPQ9BX97 442 aa19.2■□□□□ 0.66
CLPX-203ENST00000558958 FAM49BQ9NUQ9 324 aa19.2■□□□□ 0.66
CLPX-203ENST00000558958 NAGPAQ9UK23 515 aa19.2■□□□□ 0.66
CLPX-203ENST00000558958 NENFQ9UMX5 172 aa19.2■□□□□ 0.66
CLPX-203ENST00000558958 MYBPHLA2RUH7 354 aa19.19■□□□□ 0.66
CLPX-203ENST00000558958 OR6C75A6NL08 312 aa19.19■□□□□ 0.66
CLPX-203ENST00000558958 H7C4K7 107 aa19.19■□□□□ 0.66
CLPX-203ENST00000558958 TBC1D4O60343 1298 aa19.19■□□□□ 0.66
CLPX-203ENST00000558958 CA3P07451 260 aa19.19■□□□□ 0.66
CLPX-203ENST00000558958 SSTR3P32745 418 aaPredicted RBP19.19■□□□□ 0.66
CLPX-203ENST00000558958 CTNNB1P35222 781 aa19.19■□□□□ 0.66
CLPX-203ENST00000558958 TSPY1Q01534 308 aa19.19■□□□□ 0.66
CLPX-203ENST00000558958 DSG1Q02413 1049 aa19.19■□□□□ 0.66
CLPX-203ENST00000558958 CCDC142Q17RM4 750 aa19.19■□□□□ 0.66
CLPX-203ENST00000558958 CTXN3Q4LDR2 81 aa19.19■□□□□ 0.66
CLPX-203ENST00000558958 MDH1BQ5I0G3 518 aa19.19■□□□□ 0.66
CLPX-203ENST00000558958 TRIM72Q6ZMU5 477 aa19.19■□□□□ 0.66
CLPX-203ENST00000558958 MYCBPAPQ8TBZ2 947 aa19.19■□□□□ 0.66
CLPX-203ENST00000558958 PIK3R5Q8WYR1 880 aa19.19■□□□□ 0.66
CLPX-203ENST00000558958 CYFIP2Q96F07 1278 aa19.19■□□□□ 0.66
CLPX-203ENST00000558958 TMEM209Q96SK2 561 aa19.19■□□□□ 0.66
CLPX-203ENST00000558958 C17orf80Q9BSJ5 609 aa19.19■□□□□ 0.66
CLPX-203ENST00000558958 OXCT2Q9BYC2 517 aaPredicted RBP19.19■□□□□ 0.66
CLPX-203ENST00000558958 PDCL3Q9H2J4 239 aa19.19■□□□□ 0.66
CLPX-203ENST00000558958 GTF3C4Q9UKN8 822 aa19.19■□□□□ 0.66
CLPX-203ENST00000558958 YBX2Q9Y2T7 364 aaKnown RBP19.19■□□□□ 0.66
CLPX-203ENST00000558958 CYP1A1P04798 512 aaPredicted RBP19.18■□□□□ 0.66
CLPX-203ENST00000558958 GZMAP12544 262 aa19.18■□□□□ 0.66
CLPX-203ENST00000558958 CCDC130P13994 396 aa19.18■□□□□ 0.66
CLPX-203ENST00000558958 PBX2P40425 430 aa19.18■□□□□ 0.66
CLPX-203ENST00000558958 GLUD2P49448 558 aa19.18■□□□□ 0.66
CLPX-203ENST00000558958 CYP27A1Q02318 531 aa19.18■□□□□ 0.66
CLPX-203ENST00000558958 SPA17Q15506 151 aa19.18■□□□□ 0.66
CLPX-203ENST00000558958 CLEC16AQ2KHT3 1053 aa19.18■□□□□ 0.66
CLPX-203ENST00000558958 KIAA1841Q6NSI8 718 aa19.18■□□□□ 0.66
CLPX-203ENST00000558958 ALKBH5Q6P6C2 394 aaKnown RBP19.18■□□□□ 0.66
CLPX-203ENST00000558958 LRRTM3Q86VH5 581 aa19.18■□□□□ 0.66
CLPX-203ENST00000558958 TDHQ8IZJ6 230 aa19.18■□□□□ 0.66
CLPX-203ENST00000558958 ACRBPQ8NEB7 543 aa19.18■□□□□ 0.66
CLPX-203ENST00000558958 RIN2Q8WYP3 895 aaPredicted RBP19.18■□□□□ 0.66
CLPX-203ENST00000558958 HNRNPABQ99729 332 aaKnown RBP19.18■□□□□ 0.66
CLPX-203ENST00000558958 DESI2Q9BSY9 194 aa19.18■□□□□ 0.66
CLPX-203ENST00000558958 PBX4Q9BYU1 374 aa19.18■□□□□ 0.66
CLPX-203ENST00000558958 ZCWPW1Q9H0M4 648 aa19.18■□□□□ 0.66
CLPX-203ENST00000558958 LHX5Q9H2C1 402 aa19.18■□□□□ 0.66
CLPX-203ENST00000558958 TSPAN16Q9UKR8 245 aa19.18■□□□□ 0.66
CLPX-203ENST00000558958 REXO2Q9Y3B8 237 aaKnown RBP19.18■□□□□ 0.66
CLPX-203ENST00000558958 ADGRG1Q9Y653 693 aa19.18■□□□□ 0.66
CLPX-203ENST00000558958 PDE4DIPQ5VU43 2346 aa19.18■□□□□ 0.66
CLPX-203ENST00000558958 C5orf67F2Z3F1 127 aa19.17■□□□□ 0.66
CLPX-203ENST00000558958 CAPN15O75808 1086 aa19.17■□□□□ 0.66
CLPX-203ENST00000558958 MICAL2O94851 1124 aa19.17■□□□□ 0.66
CLPX-203ENST00000558958 IPO7O95373 1038 aaKnown RBP19.17■□□□□ 0.66
CLPX-203ENST00000558958 LSM8O95777 96 aaKnown RBP19.17■□□□□ 0.66
CLPX-203ENST00000558958 UNGP13051 313 aaPredicted RBP19.17■□□□□ 0.66
CLPX-203ENST00000558958 CDH5P33151 784 aaPredicted RBP19.17■□□□□ 0.66
CLPX-203ENST00000558958 MAPRE1Q15691 268 aaKnown RBP19.17■□□□□ 0.66
CLPX-203ENST00000558958 GOLGA7BQ2TAP0 167 aa19.17■□□□□ 0.66
CLPX-203ENST00000558958 CCDC122Q5T0U0 273 aa19.17■□□□□ 0.66
CLPX-203ENST00000558958 DENND1BQ6P3S1 775 aa19.17■□□□□ 0.66
CLPX-203ENST00000558958 PRSS55Q6UWB4 352 aaPredicted RBP19.17■□□□□ 0.66
CLPX-203ENST00000558958 SPRED2Q7Z698 418 aa19.17■□□□□ 0.66
CLPX-203ENST00000558958 PASD1Q8IV76 773 aa19.17■□□□□ 0.66
CLPX-203ENST00000558958 FUKQ8N0W3 1084 aa19.17■□□□□ 0.66
CLPX-203ENST00000558958 VPS52Q8N1B4 723 aa19.17■□□□□ 0.66
CLPX-203ENST00000558958 SLC2A14Q8TDB8 520 aa19.17■□□□□ 0.66
CLPX-203ENST00000558958 PCED1BQ96HM7 432 aa19.17■□□□□ 0.66
CLPX-203ENST00000558958 TAS2R14Q9NYV8 317 aa19.17■□□□□ 0.66
CLPX-203ENST00000558958 MTRRQ9UBK8 725 aa19.17■□□□□ 0.66
CLPX-203ENST00000558958 BACE2Q9Y5Z0 518 aa19.17■□□□□ 0.66
CLPX-203ENST00000558958 CHD9Q3L8U1 2897 aa19.17■□□□□ 0.66
CLPX-203ENST00000558958 M0QYV0 167 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 RB1P06400 928 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 NOMO3P69849 1222 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 KRT83P78385 493 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 TAP1Q03518 808 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 RAB30Q15771 203 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 PSMD5Q16401 504 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 PKDCCQ504Y2 493 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 RSPO2Q6UXX9 243 aaPredicted RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms