RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 PTK6Q13882 451 aa16.22■□□□□ 0.19
AP4E1-202ENST00000558439 PRCCQ92733 491 aaPredicted RBP16.22■□□□□ 0.19
AP4E1-202ENST00000558439 KIF9Q9HAQ2 790 aa16.22■□□□□ 0.19
AP4E1-202ENST00000558439 ZC3H7BQ9UGR2 993 aaKnown RBP16.22■□□□□ 0.19
AP4E1-202ENST00000558439 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.22■□□□□ 0.19
AP4E1-202ENST00000558439 UMODL1Q5DID0 1318 aa16.22■□□□□ 0.19
AP4E1-202ENST00000558439 ARL1P40616 181 aaPredicted RBP16.22■□□□□ 0.19
AP4E1-202ENST00000558439 AMHR2Q16671 573 aa16.22■□□□□ 0.19
AP4E1-202ENST00000558439 FAM111AQ96PZ2 611 aa16.22■□□□□ 0.19
AP4E1-202ENST00000558439 TSSK1BQ9BXA7 367 aa16.22■□□□□ 0.19
AP4E1-202ENST00000558439 LRRC4Q9HBW1 653 aa16.22■□□□□ 0.19
AP4E1-202ENST00000558439 A8MXQ7 604 aa16.22■□□□□ 0.19
AP4E1-202ENST00000558439 NCF2P19878 526 aaPredicted RBP16.22■□□□□ 0.19
AP4E1-202ENST00000558439 GEMIN4P57678 1058 aaKnown RBP16.22■□□□□ 0.19
AP4E1-202ENST00000558439 C1QBPQ07021 282 aaKnown RBP16.22■□□□□ 0.19
AP4E1-202ENST00000558439 TTLL4Q14679 1199 aa16.22■□□□□ 0.19
AP4E1-202ENST00000558439 YTHDF3Q7Z739 585 aaKnown RBP16.22■□□□□ 0.19
AP4E1-202ENST00000558439 NUDCD3Q8IVD9 361 aa16.22■□□□□ 0.19
AP4E1-202ENST00000558439 PPIL6Q8IXY8 311 aa16.22■□□□□ 0.19
AP4E1-202ENST00000558439 BORCS6Q96GS4 357 aa16.22■□□□□ 0.19
AP4E1-202ENST00000558439 MMP19Q99542 508 aa16.22■□□□□ 0.19
AP4E1-202ENST00000558439 CXorf56Q9H5V9 222 aa16.22■□□□□ 0.19
AP4E1-202ENST00000558439 RNF19AQ9NV58 838 aa16.22■□□□□ 0.19
AP4E1-202ENST00000558439 PNMA3Q9UL41 463 aa16.22■□□□□ 0.19
AP4E1-202ENST00000558439 RPTORQ8N122 1335 aa16.22■□□□□ 0.19
AP4E1-202ENST00000558439 CCDC88AQ3V6T2 1871 aa16.21■□□□□ 0.19
AP4E1-202ENST00000558439 O00370 1275 aa16.21■□□□□ 0.19
AP4E1-202ENST00000558439 KRT38O76015 456 aa16.21■□□□□ 0.19
AP4E1-202ENST00000558439 GJB1P08034 283 aa16.21■□□□□ 0.19
AP4E1-202ENST00000558439 WNK4Q96J92 1243 aa16.21■□□□□ 0.19
AP4E1-202ENST00000558439 SCYL1Q96KG9 808 aa16.21■□□□□ 0.19
AP4E1-202ENST00000558439 MAGEB18Q96M61 343 aa16.21■□□□□ 0.19
AP4E1-202ENST00000558439 TMEM237Q96Q45 408 aa16.21■□□□□ 0.19
AP4E1-202ENST00000558439 OSBPP22059 807 aa16.21■□□□□ 0.19
AP4E1-202ENST00000558439 ELF1P32519 619 aa16.21■□□□□ 0.19
AP4E1-202ENST00000558439 PEX5P50542 639 aa16.21■□□□□ 0.19
AP4E1-202ENST00000558439 KCNJ2P63252 427 aa16.21■□□□□ 0.19
AP4E1-202ENST00000558439 ZNF200P98182 395 aaPredicted RBP16.21■□□□□ 0.19
AP4E1-202ENST00000558439 KDSRQ06136 332 aa16.21■□□□□ 0.19
AP4E1-202ENST00000558439 FAM47CQ5HY64 1035 aa16.21■□□□□ 0.19
AP4E1-202ENST00000558439 C12orf56Q8IXR9 622 aa16.21■□□□□ 0.19
AP4E1-202ENST00000558439 ZC3H3Q8IXZ2 948 aaKnown RBP16.21■□□□□ 0.19
AP4E1-202ENST00000558439 MFSD14AQ96MC6 490 aa16.21■□□□□ 0.19
AP4E1-202ENST00000558439 SLCO1B3Q9NPD5 702 aa16.21■□□□□ 0.19
AP4E1-202ENST00000558439 ZDHHC18Q9NUE0 388 aa16.21■□□□□ 0.19
AP4E1-202ENST00000558439 TRIM33Q9UPN9 1127 aa16.21■□□□□ 0.19
AP4E1-202ENST00000558439 DNALI1O14645 258 aaPredicted RBP16.21■□□□□ 0.19
AP4E1-202ENST00000558439 LAMTOR4Q0VGL1 99 aa16.21■□□□□ 0.19
AP4E1-202ENST00000558439 TMEM132BQ14DG7 1078 aa16.21■□□□□ 0.19
AP4E1-202ENST00000558439 FKBP1CQ5VVH2 108 aa16.21■□□□□ 0.19
AP4E1-202ENST00000558439 SAMD3Q8N6K7 520 aa16.21■□□□□ 0.19
AP4E1-202ENST00000558439 STAMBPL1Q96FJ0 436 aa16.21■□□□□ 0.19
AP4E1-202ENST00000558439 HPDLQ96IR7 371 aa16.21■□□□□ 0.19
AP4E1-202ENST00000558439 VPS11Q9H270 941 aa16.21■□□□□ 0.19
AP4E1-202ENST00000558439 CYP39A1Q9NYL5 469 aa16.21■□□□□ 0.19
AP4E1-202ENST00000558439 DHX15O43143 795 aaKnown RBP16.2■□□□□ 0.18
AP4E1-202ENST00000558439 ATP5HO75947 161 aa16.2■□□□□ 0.18
AP4E1-202ENST00000558439 RFC1P35251 1148 aaPredicted RBP16.2■□□□□ 0.18
AP4E1-202ENST00000558439 VCPP55072 806 aaKnown RBP16.2■□□□□ 0.18
AP4E1-202ENST00000558439 NOMO3P69849 1222 aa16.2■□□□□ 0.18
AP4E1-202ENST00000558439 GLRA4Q5JXX5 417 aa16.2■□□□□ 0.18
AP4E1-202ENST00000558439 RAPH1Q70E73 1250 aa16.2■□□□□ 0.18
AP4E1-202ENST00000558439 CRLF3Q8IUI8 442 aa16.2■□□□□ 0.18
AP4E1-202ENST00000558439 FBXO16Q8IX29 292 aaPredicted RBP16.2■□□□□ 0.18
AP4E1-202ENST00000558439 AGR3Q8TD06 166 aa16.2■□□□□ 0.18
AP4E1-202ENST00000558439 FOXP3Q9BZS1 431 aa16.2■□□□□ 0.18
AP4E1-202ENST00000558439 ANP32DO95626 131 aa16.2■□□□□ 0.18
AP4E1-202ENST00000558439 ATP6V1G2O95670 118 aa16.2■□□□□ 0.18
AP4E1-202ENST00000558439 PTPRAP18433 802 aa16.2■□□□□ 0.18
AP4E1-202ENST00000558439 HEATR6Q6AI08 1181 aaKnown RBP16.2■□□□□ 0.18
AP4E1-202ENST00000558439 CEP120Q8N960 986 aa16.2■□□□□ 0.18
AP4E1-202ENST00000558439 LRRN4Q8WUT4 740 aa16.2■□□□□ 0.18
AP4E1-202ENST00000558439 ACAP3Q96P50 834 aa16.2■□□□□ 0.18
AP4E1-202ENST00000558439 PAFAH2Q99487 392 aa16.2■□□□□ 0.18
AP4E1-202ENST00000558439 SMYD3Q9H7B4 428 aa16.2■□□□□ 0.18
AP4E1-202ENST00000558439 COMMD10Q9Y6G5 202 aa16.2■□□□□ 0.18
AP4E1-202ENST00000558439 ADCY3O60266 1144 aa16.2■□□□□ 0.18
AP4E1-202ENST00000558439 TMEM132DQ14C87 1099 aa16.2■□□□□ 0.18
AP4E1-202ENST00000558439 FAM161BQ96MY7 647 aa16.2■□□□□ 0.18
AP4E1-202ENST00000558439 AGAP3Q96P47 875 aa16.2■□□□□ 0.18
AP4E1-202ENST00000558439 PDGFDQ9GZP0 370 aaPredicted RBP16.2■□□□□ 0.18
AP4E1-202ENST00000558439 CCDC78A2IDD5 438 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 STAMBPO95630 424 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 CST3P01034 146 aaPredicted RBP16.19■□□□□ 0.18
AP4E1-202ENST00000558439 SERPINB6P35237 376 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 GEN1Q17RS7 908 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 PAXIP1Q6ZW49 1069 aaPredicted RBP16.19■□□□□ 0.18
AP4E1-202ENST00000558439 CPB2Q96IY4 423 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 PORCNQ9H237 461 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 WDR35Q9P2L0 1181 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 TRIM49D1C9J1S8 452 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 H0YGN5 161 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 APOL1O14791 398 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 LYPLA2O95372 231 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 CFHP08603 1231 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 TNFAIP2Q03169 654 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 AP1B1Q10567 949 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 NME3Q13232 169 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 MROH9Q5TGP6 573 aa16.19■□□□□ 0.18
AP4E1-202ENST00000558439 ATG16L1Q676U5 607 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms