RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 ITGB1P05556 798 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 FGFR1P11362 822 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 ITGA4P13612 1032 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 KCNE1P15382 129 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 BMP6P22004 513 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 GARTP22102 1010 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 DNAJB1P25685 340 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 MAGEA8P43361 318 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 PAPOLAP51003 745 aaKnown RBP8.52□□□□□ -1.05
RTF1-205ENST00000558298 ELF3P78545 371 aaPredicted RBP8.52□□□□□ -1.05
RTF1-205ENST00000558298 PSMD2Q13200 908 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 GPM6BQ13491 265 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 KCNB1Q14721 858 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 SETDB1Q15047 1291 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 NAB2Q15742 525 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 TSNAXIP1Q2TAA8 658 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 ZNF568Q3ZCX4 644 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 TIGD5Q53EQ6 642 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 COBLL1Q53SF7 1204 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 ODF2Q5BJF6 829 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 EEF1DP3Q658K8 133 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 LRRC55Q6ZSA7 311 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 BZW1Q7L1Q6 419 aaKnown RBP8.52□□□□□ -1.05
RTF1-205ENST00000558298 MAATS1Q7Z4T9 603 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 SFR1Q86XK3 245 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 C12orf56Q8IXR9 622 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 MYCT1Q8N699 235 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 FBF1Q8TES7 1133 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 CPLX3Q8WVH0 158 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 CCT6BQ92526 530 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 FAM212AQ96EL1 285 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 CHMP6Q96FZ7 201 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 PAGE5Q96GU1 130 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 DHTKD1Q96HY7 919 aaPredicted RBP8.52□□□□□ -1.05
RTF1-205ENST00000558298 CPB2Q96IY4 423 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 TRAPPC9Q96Q05 1148 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 TRIM7Q9C029 511 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 FAM192AQ9GZU8 254 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 NXF3Q9H4D5 531 aaKnown RBP8.52□□□□□ -1.05
RTF1-205ENST00000558298 CCDC134Q9H6E4 229 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 TOPORSQ9NS56 1045 aaPredicted RBP8.52□□□□□ -1.05
RTF1-205ENST00000558298 PANK4Q9NVE7 773 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 CNTN3Q9P232 1028 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 SLC12A4Q9UP95 1085 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 EXOC7Q9UPT5 735 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 IRAK3Q9Y616 596 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 MYO7AQ13402 2215 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 SSU72P8A0A1W2PR75 194 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 ARL5CA6NH57 179 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 TBKBP1A7MCY6 615 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 MEIS3P2A8K0S8 358 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 SFI1A8K8P3 1242 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 HNRNPDLO14979 420 aaKnown RBP8.51□□□□□ -1.05
RTF1-205ENST00000558298 OGTO15294 1046 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 CLDN3O15551 220 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 TEX33O43247 280 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 KLRC4O43908 158 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 RECQL4O94761 1208 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 RHOBTB3O94955 611 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 IMPDH2P12268 514 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 BMP1P13497 986 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 TRIM21P19474 475 aaKnown RBP8.51□□□□□ -1.05
RTF1-205ENST00000558298 PAX3P23760 479 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 CTNNB1P35222 781 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 MRPS25P82663 173 aaKnown RBP8.51□□□□□ -1.05
RTF1-205ENST00000558298 CACNB1Q02641 598 aaPredicted RBP8.51□□□□□ -1.05
RTF1-205ENST00000558298 GOLGA8FQ08AF8 430 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 GOLGA8DPQ0D2H9 430 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 DPYDQ12882 1025 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 TMED1Q13445 227 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 BYSLQ13895 437 aaKnown RBP8.51□□□□□ -1.05
RTF1-205ENST00000558298 CCDC85BQ15834 202 aaPredicted RBP8.51□□□□□ -1.05
RTF1-205ENST00000558298 NFIL3Q16649 462 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 PTPROQ16827 1216 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 CTC1Q2NKJ3 1217 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 HERC4Q5GLZ8 1057 aaPredicted RBP8.51□□□□□ -1.05
RTF1-205ENST00000558298 TJAP1Q5JTD0 557 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 FAM26FQ5R3K3 315 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 CWF19L1Q69YN2 538 aaKnown RBP8.51□□□□□ -1.05
RTF1-205ENST00000558298 SLC39A4Q6P5W5 647 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 EP400NLQ6ZTU2 488 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 DYMQ7RTS9 669 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 NT5DC4Q86YG4 428 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 COLGALT2Q8IYK4 626 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 SLC39A11Q8N1S5 342 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 GALNT15Q8N3T1 639 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 KLHL23Q8NBE8 558 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 COLGALT1Q8NBJ5 622 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 ZNF507Q8TCN5 953 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 SPPL3Q8TCT6 385 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 HELQQ8TDG4 1101 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 MICAL1Q8TDZ2 1067 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 NSMCE1Q8WV22 266 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 SYN2Q92777 582 aaPredicted RBP8.51□□□□□ -1.05
RTF1-205ENST00000558298 PBKQ96KB5 322 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 SNX27Q96L92 541 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 ZNF558Q96NG5 402 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 ASB2Q96Q27 587 aa8.51□□□□□ -1.05
RTF1-205ENST00000558298 TARS2Q9BW92 718 aaKnown RBP8.51□□□□□ -1.05
RTF1-205ENST00000558298 ISCUQ9H1K1 167 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms