RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 SLC22A17Q8WUG5 538 aa22.65■■□□□ 1.22
CASC4-204ENST00000557945 TMEM176AQ96HP8 235 aa22.65■■□□□ 1.22
CASC4-204ENST00000557945 NLRC4Q9NPP4 1024 aa22.65■■□□□ 1.22
CASC4-204ENST00000557945 CRTAC1Q9NQ79 661 aa22.65■■□□□ 1.22
CASC4-204ENST00000557945 TMLHEQ9NVH6 421 aa22.65■■□□□ 1.22
CASC4-204ENST00000557945 HCFC2Q9Y5Z7 792 aa22.65■■□□□ 1.22
CASC4-204ENST00000557945 AP5Z1O43299 807 aa22.64■■□□□ 1.22
CASC4-204ENST00000557945 EPCAMP16422 314 aa22.64■■□□□ 1.22
CASC4-204ENST00000557945 ELF1P32519 619 aa22.64■■□□□ 1.22
CASC4-204ENST00000557945 RAD23BP54727 409 aa22.64■■□□□ 1.22
CASC4-204ENST00000557945 CYP27A1Q02318 531 aa22.64■■□□□ 1.22
CASC4-204ENST00000557945 ADCY1Q08828 1119 aa22.64■■□□□ 1.22
CASC4-204ENST00000557945 MAPRE1Q15691 268 aaKnown RBP22.64■■□□□ 1.22
CASC4-204ENST00000557945 NFE2Q16621 373 aaPredicted RBP22.64■■□□□ 1.22
CASC4-204ENST00000557945 TPGS2Q68CL5 300 aa22.64■■□□□ 1.22
CASC4-204ENST00000557945 RBBP8NLQ8NC74 664 aaPredicted RBP22.64■■□□□ 1.22
CASC4-204ENST00000557945 PPM1EQ8WY54 764 aa22.64■■□□□ 1.22
CASC4-204ENST00000557945 HEXIM2Q96MH2 286 aaKnown RBP22.64■■□□□ 1.22
CASC4-204ENST00000557945 PKMYT1Q99640 499 aa22.64■■□□□ 1.22
CASC4-204ENST00000557945 ABI2Q9NYB9 513 aaPredicted RBP22.64■■□□□ 1.22
CASC4-204ENST00000557945 AFF4Q9UHB7 1163 aaKnown RBP22.64■■□□□ 1.22
CASC4-204ENST00000557945 TRANK1O15050 2925 aa22.64■■□□□ 1.22
CASC4-204ENST00000557945 FSD2A1L4K1 749 aa22.63■■□□□ 1.21
CASC4-204ENST00000557945 MTMR11A4FU01 709 aa22.63■■□□□ 1.21
CASC4-204ENST00000557945 ABLIM3O94929 683 aa22.63■■□□□ 1.21
CASC4-204ENST00000557945 RBM10P98175 930 aaKnown RBP22.63■■□□□ 1.21
CASC4-204ENST00000557945 SMARCB1Q12824 385 aa22.63■■□□□ 1.21
CASC4-204ENST00000557945 DRAP1Q14919 205 aaPredicted RBP22.63■■□□□ 1.21
CASC4-204ENST00000557945 FAM171BQ6P995 826 aa22.63■■□□□ 1.21
CASC4-204ENST00000557945 LILRA6Q6PI73 481 aa22.63■■□□□ 1.21
CASC4-204ENST00000557945 EP400NLQ6ZTU2 488 aa22.63■■□□□ 1.21
CASC4-204ENST00000557945 CACNA2D4Q7Z3S7 1137 aa22.63■■□□□ 1.21
CASC4-204ENST00000557945 SPATA2LQ8IUW3 424 aaPredicted RBP22.63■■□□□ 1.21
CASC4-204ENST00000557945 CRYBG2Q8N1P7 616 aa22.63■■□□□ 1.21
CASC4-204ENST00000557945 EFHBQ8N7U6 833 aa22.63■■□□□ 1.21
CASC4-204ENST00000557945 ATAD1Q8NBU5 361 aa22.63■■□□□ 1.21
CASC4-204ENST00000557945 KREMEN2Q8NCW0 462 aa22.63■■□□□ 1.21
CASC4-204ENST00000557945 MYCBPAPQ8TBZ2 947 aa22.63■■□□□ 1.21
CASC4-204ENST00000557945 SHC3Q92529 594 aa22.63■■□□□ 1.21
CASC4-204ENST00000557945 MYLPFQ96A32 169 aa22.63■■□□□ 1.21
CASC4-204ENST00000557945 NAA15Q9BXJ9 866 aaKnown RBP22.63■■□□□ 1.21
CASC4-204ENST00000557945 STK33Q9BYT3 514 aa22.63■■□□□ 1.21
CASC4-204ENST00000557945 CYP4F11Q9HBI6 524 aa22.63■■□□□ 1.21
CASC4-204ENST00000557945 PCDHB5Q9Y5E4 795 aa22.63■■□□□ 1.21
CASC4-204ENST00000557945 SPDYE4A6NLX3 237 aa22.63■■□□□ 1.21
CASC4-204ENST00000557945 RNF225M0QZC1 329 aaPredicted RBP22.63■■□□□ 1.21
CASC4-204ENST00000557945 PRRG1O14668 218 aa22.63■■□□□ 1.21
CASC4-204ENST00000557945 ATF2P15336 505 aa22.63■■□□□ 1.21
CASC4-204ENST00000557945 PBX1P40424 430 aa22.63■■□□□ 1.21
CASC4-204ENST00000557945 C4orf50Q6ZRC1 276 aa22.63■■□□□ 1.21
CASC4-204ENST00000557945 C12orf29Q8N999 325 aa22.63■■□□□ 1.21
CASC4-204ENST00000557945 SLC4A11Q8NBS3 891 aa22.63■■□□□ 1.21
CASC4-204ENST00000557945 SPAG5Q96R06 1193 aa22.63■■□□□ 1.21
CASC4-204ENST00000557945 MED10Q9BTT4 135 aa22.63■■□□□ 1.21
CASC4-204ENST00000557945 MAN1C1Q9NR34 630 aa22.63■■□□□ 1.21
CASC4-204ENST00000557945 FAM49BQ9NUQ9 324 aa22.63■■□□□ 1.21
CASC4-204ENST00000557945 FBXW11Q9UKB1 542 aa22.63■■□□□ 1.21
CASC4-204ENST00000557945 DAAM1Q9Y4D1 1078 aa22.63■■□□□ 1.21
CASC4-204ENST00000557945 FOXN3O00409 490 aaPredicted RBP22.62■■□□□ 1.21
CASC4-204ENST00000557945 LINC01565O15544 149 aa22.62■■□□□ 1.21
CASC4-204ENST00000557945 NCK2O43639 380 aa22.62■■□□□ 1.21
CASC4-204ENST00000557945 PNMA6AP0CW24 399 aaPredicted RBP22.62■■□□□ 1.21
CASC4-204ENST00000557945 SRGAP2BP0DMP2 458 aa22.62■■□□□ 1.21
CASC4-204ENST00000557945 CD19P15391 556 aa22.62■■□□□ 1.21
CASC4-204ENST00000557945 DUSP4Q13115 394 aa22.62■■□□□ 1.21
CASC4-204ENST00000557945 SKIV2LQ15477 1246 aaKnown RBP22.62■■□□□ 1.21
CASC4-204ENST00000557945 LIN9Q5TKA1 542 aa22.62■■□□□ 1.21
CASC4-204ENST00000557945 ELMSAN1Q6PJG2 1045 aa22.62■■□□□ 1.21
CASC4-204ENST00000557945 VN1R2Q8NFZ6 395 aa22.62■■□□□ 1.21
CASC4-204ENST00000557945 C2orf15Q8WU43 125 aaKnown RBP22.62■■□□□ 1.21
CASC4-204ENST00000557945 CASP10Q92851 521 aa22.62■■□□□ 1.21
CASC4-204ENST00000557945 PCED1BQ96HM7 432 aa22.62■■□□□ 1.21
CASC4-204ENST00000557945 CEP72Q9P209 647 aa22.62■■□□□ 1.21
CASC4-204ENST00000557945 DPP7Q9UHL4 492 aa22.62■■□□□ 1.21
CASC4-204ENST00000557945 SLC27A5Q9Y2P5 690 aa22.62■■□□□ 1.21
CASC4-204ENST00000557945 SEC24AO95486 1093 aa22.61■■□□□ 1.21
CASC4-204ENST00000557945 VNN2O95498 520 aa22.61■■□□□ 1.21
CASC4-204ENST00000557945 C1RP00736 705 aa22.61■■□□□ 1.21
CASC4-204ENST00000557945 CCDC130P13994 396 aa22.61■■□□□ 1.21
CASC4-204ENST00000557945 SPPL2BQ8TCT7 592 aa22.61■■□□□ 1.21
CASC4-204ENST00000557945 SEPT5Q99719 369 aaPredicted RBP22.61■■□□□ 1.21
CASC4-204ENST00000557945 NUP58Q9BVL2 599 aa22.61■■□□□ 1.21
CASC4-204ENST00000557945 B3GNT5Q9BYG0 378 aa22.61■■□□□ 1.21
CASC4-204ENST00000557945 GPR88Q9GZN0 384 aa22.61■■□□□ 1.21
CASC4-204ENST00000557945 PLEKHA4Q9H4M7 779 aa22.61■■□□□ 1.21
CASC4-204ENST00000557945 CLDND1Q9NY35 253 aa22.61■■□□□ 1.21
CASC4-204ENST00000557945 MAFFQ9ULX9 164 aa22.61■■□□□ 1.21
CASC4-204ENST00000557945 CNTN6Q9UQ52 1028 aa22.61■■□□□ 1.21
CASC4-204ENST00000557945 PLXNA3P51805 1871 aa22.6■■□□□ 1.21
CASC4-204ENST00000557945 F8VZ95 297 aa22.6■■□□□ 1.21
CASC4-204ENST00000557945 CLDN5O00501 218 aa22.6■■□□□ 1.21
CASC4-204ENST00000557945 GLP2RO95838 553 aa22.6■■□□□ 1.21
CASC4-204ENST00000557945 CALCAP01258 141 aa22.6■■□□□ 1.21
CASC4-204ENST00000557945 PAEPP09466 180 aa22.6■■□□□ 1.21
CASC4-204ENST00000557945 ZNF132P52740 706 aa22.6■■□□□ 1.21
CASC4-204ENST00000557945 ADAM15Q13444 863 aa22.6■■□□□ 1.21
CASC4-204ENST00000557945 MGAT5BQ3V5L5 792 aa22.6■■□□□ 1.21
CASC4-204ENST00000557945 CCDC149Q6ZUS6 474 aa22.6■■□□□ 1.21
CASC4-204ENST00000557945 TTC9BQ8N6N2 239 aa22.6■■□□□ 1.21
CASC4-204ENST00000557945 SLC7A14Q8TBB6 771 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms