RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 AKAP3O75969 853 aa13.53□□□□□ -0.24
SHMT2-230ENST00000557427 LRG1P02750 347 aa13.53□□□□□ -0.24
SHMT2-230ENST00000557427 ERCC5P28715 1186 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-230ENST00000557427 TKTP29401 623 aaKnown RBP13.53□□□□□ -0.24
SHMT2-230ENST00000557427 SLC12A3P55017 1021 aa13.53□□□□□ -0.24
SHMT2-230ENST00000557427 ROR1Q01973 937 aa13.53□□□□□ -0.24
SHMT2-230ENST00000557427 CREB5Q02930 508 aa13.53□□□□□ -0.24
SHMT2-230ENST00000557427 FCHO2Q0JRZ9 810 aa13.53□□□□□ -0.24
SHMT2-230ENST00000557427 ELAVL2Q12926 359 aaKnown RBP13.53□□□□□ -0.24
SHMT2-230ENST00000557427 MAPK7Q13164 816 aa13.53□□□□□ -0.24
SHMT2-230ENST00000557427 DMP1Q13316 513 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-230ENST00000557427 KARSQ15046 597 aaKnown RBP13.53□□□□□ -0.24
SHMT2-230ENST00000557427 TMEM119Q4V9L6 283 aa13.53□□□□□ -0.24
SHMT2-230ENST00000557427 ARSHQ5FYA8 562 aa13.53□□□□□ -0.24
SHMT2-230ENST00000557427 ATF7IP2Q5U623 682 aa13.53□□□□□ -0.24
SHMT2-230ENST00000557427 PDZD4Q76G19 769 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-230ENST00000557427 GPIHBP1Q8IV16 184 aa13.53□□□□□ -0.24
SHMT2-230ENST00000557427 GRAMD1CQ8IYS0 662 aa13.53□□□□□ -0.24
SHMT2-230ENST00000557427 DEFB124Q8NES8 71 aa13.53□□□□□ -0.24
SHMT2-230ENST00000557427 ENOX1Q8TC92 643 aaKnown RBP13.53□□□□□ -0.24
SHMT2-230ENST00000557427 ADPGKQ9BRR6 497 aa13.53□□□□□ -0.24
SHMT2-230ENST00000557427 GTSE1Q9NYZ3 720 aa13.53□□□□□ -0.24
SHMT2-230ENST00000557427 CEP72Q9P209 647 aa13.53□□□□□ -0.24
SHMT2-230ENST00000557427 BPTFQ12830 3046 aa13.53□□□□□ -0.24
SHMT2-230ENST00000557427 I3L4J1 428 aa13.52□□□□□ -0.25
SHMT2-230ENST00000557427 MYL1P05976 194 aa13.52□□□□□ -0.25
SHMT2-230ENST00000557427 GUCY2CP25092 1073 aa13.52□□□□□ -0.25
SHMT2-230ENST00000557427 SMTNP53814 917 aa13.52□□□□□ -0.25
SHMT2-230ENST00000557427 MCM6Q14566 821 aa13.52□□□□□ -0.25
SHMT2-230ENST00000557427 TEAD2Q15562 447 aa13.52□□□□□ -0.25
SHMT2-230ENST00000557427 COL28A1Q2UY09 1125 aa13.52□□□□□ -0.25
SHMT2-230ENST00000557427 SLC8B1Q6J4K2 584 aa13.52□□□□□ -0.25
SHMT2-230ENST00000557427 C1orf228Q6PIY5 440 aa13.52□□□□□ -0.25
SHMT2-230ENST00000557427 CCDC186Q7Z3E2 898 aa13.52□□□□□ -0.25
SHMT2-230ENST00000557427 GPBP1Q86WP2 473 aa13.52□□□□□ -0.25
SHMT2-230ENST00000557427 RALGPS2Q86X27 583 aaPredicted RBP13.52□□□□□ -0.25
SHMT2-230ENST00000557427 SYNPOQ8N3V7 929 aa13.52□□□□□ -0.25
SHMT2-230ENST00000557427 KCTD17Q8N5Z5 321 aa13.52□□□□□ -0.25
SHMT2-230ENST00000557427 LRRC15Q8TF66 581 aa13.52□□□□□ -0.25
SHMT2-230ENST00000557427 ZFYVE19Q96K21 471 aa13.52□□□□□ -0.25
SHMT2-230ENST00000557427 TCHPQ9BT92 498 aa13.52□□□□□ -0.25
SHMT2-230ENST00000557427 TARS2Q9BW92 718 aaKnown RBP13.52□□□□□ -0.25
SHMT2-230ENST00000557427 HSD3B7Q9H2F3 369 aa13.52□□□□□ -0.25
SHMT2-230ENST00000557427 KCNF1Q9H3M0 494 aa13.52□□□□□ -0.25
SHMT2-230ENST00000557427 CUEDC2Q9H467 287 aa13.52□□□□□ -0.25
SHMT2-230ENST00000557427 MAGEF1Q9HAY2 307 aa13.52□□□□□ -0.25
SHMT2-230ENST00000557427 IMPACTQ9P2X3 320 aa13.52□□□□□ -0.25
SHMT2-230ENST00000557427 ARID2Q68CP9 1835 aa13.52□□□□□ -0.25
SHMT2-230ENST00000557427 ASCC3Q8N3C0 2202 aaKnown RBP13.52□□□□□ -0.25
SHMT2-230ENST00000557427 PATE3B3GLJ2 98 aa13.51□□□□□ -0.25
SHMT2-230ENST00000557427 PRRG1O14668 218 aa13.51□□□□□ -0.25
SHMT2-230ENST00000557427 CBFA2T2O43439 604 aa13.51□□□□□ -0.25
SHMT2-230ENST00000557427 KRT18P05783 430 aaKnown RBP13.51□□□□□ -0.25
SHMT2-230ENST00000557427 THP07101 528 aa13.51□□□□□ -0.25
SHMT2-230ENST00000557427 PLS3P13797 630 aa13.51□□□□□ -0.25
SHMT2-230ENST00000557427 ATF2P15336 505 aa13.51□□□□□ -0.25
SHMT2-230ENST00000557427 PLCG1P19174 1290 aa13.51□□□□□ -0.25
SHMT2-230ENST00000557427 STAT6P42226 847 aa13.51□□□□□ -0.25
SHMT2-230ENST00000557427 AFMP43652 599 aa13.51□□□□□ -0.25
SHMT2-230ENST00000557427 EPHA5P54756 1037 aa13.51□□□□□ -0.25
SHMT2-230ENST00000557427 OSTNP61366 133 aa13.51□□□□□ -0.25
SHMT2-230ENST00000557427 CYP4A22Q5TCH4 519 aa13.51□□□□□ -0.25
SHMT2-230ENST00000557427 TAS1R3Q7RTX0 852 aa13.51□□□□□ -0.25
SHMT2-230ENST00000557427 TCEAL8Q8IYN2 117 aa13.51□□□□□ -0.25
SHMT2-230ENST00000557427 C3orf58Q8NDZ4 430 aa13.51□□□□□ -0.25
SHMT2-230ENST00000557427 RAD54LQ92698 747 aa13.51□□□□□ -0.25
SHMT2-230ENST00000557427 ZBTB45Q96K62 511 aaPredicted RBP13.51□□□□□ -0.25
SHMT2-230ENST00000557427 ZNF830Q96NB3 372 aaPredicted RBP13.51□□□□□ -0.25
SHMT2-230ENST00000557427 ACO2Q99798 780 aaKnown RBP13.51□□□□□ -0.25
SHMT2-230ENST00000557427 TIPINQ9BVW5 301 aa13.51□□□□□ -0.25
SHMT2-230ENST00000557427 ZHX3Q9H4I2 956 aa13.51□□□□□ -0.25
SHMT2-230ENST00000557427 TMEM134Q9H6X4 195 aa13.51□□□□□ -0.25
SHMT2-230ENST00000557427 CYP4F11Q9HBI6 524 aa13.51□□□□□ -0.25
SHMT2-230ENST00000557427 BLOC1S4Q9NUP1 217 aa13.51□□□□□ -0.25
SHMT2-230ENST00000557427 RMND1Q9NWS8 449 aa13.51□□□□□ -0.25
SHMT2-230ENST00000557427 INSL5Q9Y5Q6 135 aa13.51□□□□□ -0.25
SHMT2-230ENST00000557427 CACNA1EQ15878 2313 aa13.51□□□□□ -0.25
SHMT2-230ENST00000557427 PCNX2A6NKB5 2137 aa13.51□□□□□ -0.25
SHMT2-230ENST00000557427 ATG2BQ96BY7 2078 aa13.51□□□□□ -0.25
SHMT2-230ENST00000557427 FAM221BA6H8Z2 402 aa13.5□□□□□ -0.25
SHMT2-230ENST00000557427 TMEM189-UBE2V1I3L0A0 370 aa13.5□□□□□ -0.25
SHMT2-230ENST00000557427 SLC26A4O43511 780 aa13.5□□□□□ -0.25
SHMT2-230ENST00000557427 RECQL4O94761 1208 aa13.5□□□□□ -0.25
SHMT2-230ENST00000557427 B3GAT3O94766 335 aa13.5□□□□□ -0.25
SHMT2-230ENST00000557427 HARSP12081 509 aaKnown RBP13.5□□□□□ -0.25
SHMT2-230ENST00000557427 MYL4P12829 197 aa13.5□□□□□ -0.25
SHMT2-230ENST00000557427 BRCC3P46736 316 aa13.5□□□□□ -0.25
SHMT2-230ENST00000557427 GSDMDP57764 484 aa13.5□□□□□ -0.25
SHMT2-230ENST00000557427 FANCCQ00597 558 aa13.5□□□□□ -0.25
SHMT2-230ENST00000557427 TNK2Q07912 1038 aa13.5□□□□□ -0.25
SHMT2-230ENST00000557427 STRN3Q13033 797 aa13.5□□□□□ -0.25
SHMT2-230ENST00000557427 DCAF4L1Q3SXM0 396 aa13.5□□□□□ -0.25
SHMT2-230ENST00000557427 RRAGBQ5VZM2 374 aa13.5□□□□□ -0.25
SHMT2-230ENST00000557427 ANKS3Q6ZW76 656 aa13.5□□□□□ -0.25
SHMT2-230ENST00000557427 APBB1IPQ7Z5R6 666 aaPredicted RBP13.5□□□□□ -0.25
SHMT2-230ENST00000557427 MYCT1Q8N699 235 aa13.5□□□□□ -0.25
SHMT2-230ENST00000557427 SHKBP1Q8TBC3 707 aa13.5□□□□□ -0.25
SHMT2-230ENST00000557427 ADAM32Q8TC27 787 aa13.5□□□□□ -0.25
SHMT2-230ENST00000557427 KIAA1524Q8TCG1 905 aa13.5□□□□□ -0.25
SHMT2-230ENST00000557427 SPIRE2Q8WWL2 714 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms