RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 SEPT5Q99719 369 aaPredicted RBP11.42□□□□□ -0.58
LINC00239-201ENST00000556973 SYT15Q9BQS2 421 aa11.42□□□□□ -0.58
LINC00239-201ENST00000556973 CORO1BQ9BR76 489 aa11.42□□□□□ -0.58
LINC00239-201ENST00000556973 PI4K2AQ9BTU6 479 aa11.42□□□□□ -0.58
LINC00239-201ENST00000556973 RAB20Q9NX57 234 aa11.42□□□□□ -0.58
LINC00239-201ENST00000556973 ABI2Q9NYB9 513 aaPredicted RBP11.42□□□□□ -0.58
LINC00239-201ENST00000556973 EPS15L1Q9UBC2 864 aa11.42□□□□□ -0.58
LINC00239-201ENST00000556973 MAGEC2Q9UBF1 373 aaPredicted RBP11.42□□□□□ -0.58
LINC00239-201ENST00000556973 CDH7Q9ULB5 785 aa11.42□□□□□ -0.58
LINC00239-201ENST00000556973 DOCK6Q96HP0 2047 aa11.42□□□□□ -0.58
LINC00239-201ENST00000556973 PMM2O15305 246 aa11.41□□□□□ -0.58
LINC00239-201ENST00000556973 DCXO43602 365 aa11.41□□□□□ -0.58
LINC00239-201ENST00000556973 HCRTO43612 131 aa11.41□□□□□ -0.58
LINC00239-201ENST00000556973 N4BP1O75113 896 aaKnown RBP11.41□□□□□ -0.58
LINC00239-201ENST00000556973 CCDC192P0DO97 292 aa11.41□□□□□ -0.58
LINC00239-201ENST00000556973 PTPN1P18031 435 aaKnown RBP11.41□□□□□ -0.58
LINC00239-201ENST00000556973 MXI1P50539 228 aa11.41□□□□□ -0.58
LINC00239-201ENST00000556973 EPHA5P54756 1037 aa11.41□□□□□ -0.58
LINC00239-201ENST00000556973 MARSP56192 900 aaKnown RBP11.41□□□□□ -0.58
LINC00239-201ENST00000556973 RPL10AP62906 217 aaKnown RBP11.41□□□□□ -0.58
LINC00239-201ENST00000556973 VEPH1Q14D04 833 aa11.41□□□□□ -0.58
LINC00239-201ENST00000556973 PRSS36Q5K4E3 855 aa11.41□□□□□ -0.58
LINC00239-201ENST00000556973 SPOPLQ6IQ16 392 aa11.41□□□□□ -0.58
LINC00239-201ENST00000556973 PDZD4Q76G19 769 aaPredicted RBP11.41□□□□□ -0.58
LINC00239-201ENST00000556973 GET4Q7L5D6 327 aaPredicted RBP11.41□□□□□ -0.58
LINC00239-201ENST00000556973 UNC93AQ86WB7 457 aa11.41□□□□□ -0.58
LINC00239-201ENST00000556973 TTC9BQ8N6N2 239 aa11.41□□□□□ -0.58
LINC00239-201ENST00000556973 MYCBPAPQ8TBZ2 947 aa11.41□□□□□ -0.58
LINC00239-201ENST00000556973 FAM200AQ8TCP9 573 aa11.41□□□□□ -0.58
LINC00239-201ENST00000556973 FGF13Q92913 245 aa11.41□□□□□ -0.58
LINC00239-201ENST00000556973 PSMG2Q969U7 264 aa11.41□□□□□ -0.58
LINC00239-201ENST00000556973 SLC35C1Q96A29 364 aa11.41□□□□□ -0.58
LINC00239-201ENST00000556973 TNIP3Q96KP6 325 aa11.41□□□□□ -0.58
LINC00239-201ENST00000556973 MYADMQ96S97 322 aa11.41□□□□□ -0.58
LINC00239-201ENST00000556973 DNAJC25Q9H1X3 360 aa11.41□□□□□ -0.58
LINC00239-201ENST00000556973 CYP3A43Q9HB55 503 aa11.41□□□□□ -0.58
LINC00239-201ENST00000556973 CRTAC1Q9NQ79 661 aa11.41□□□□□ -0.58
LINC00239-201ENST00000556973 ASAH2Q9NR71 780 aa11.41□□□□□ -0.58
LINC00239-201ENST00000556973 IGSF9Q9P2J2 1179 aa11.41□□□□□ -0.58
LINC00239-201ENST00000556973 MUTYHQ9UIF7 546 aa11.41□□□□□ -0.58
LINC00239-201ENST00000556973 COQ4Q9Y3A0 265 aa11.41□□□□□ -0.58
LINC00239-201ENST00000556973 MRPS23Q9Y3D9 190 aaKnown RBP11.41□□□□□ -0.58
LINC00239-201ENST00000556973 NME7Q9Y5B8 376 aa11.41□□□□□ -0.58
LINC00239-201ENST00000556973 P4HA2O15460 535 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 SOAT2O75908 522 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 FGF19O95750 216 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 ATF6P18850 670 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 TRIM21P19474 475 aaKnown RBP11.4□□□□□ -0.58
LINC00239-201ENST00000556973 CYP2F1P24903 491 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 ERCC5P28715 1186 aaPredicted RBP11.4□□□□□ -0.58
LINC00239-201ENST00000556973 MAGEA11P43364 429 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 ASPAP45381 313 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 FMO5P49326 533 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 CDR1P51861 262 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 PSMC1P62191 440 aaKnown RBP11.4□□□□□ -0.58
LINC00239-201ENST00000556973 NOP14P78316 857 aaKnown RBP11.4□□□□□ -0.58
LINC00239-201ENST00000556973 CYP27A1Q02318 531 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 CETN1Q12798 172 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 PTPN21Q16825 1174 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 SLC5A9Q2M3M2 681 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 CBWD6Q4V339 395 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 WDR44Q5JSH3 913 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 CBWD3Q5JTY5 395 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 CBWD5Q5RIA9 395 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 VSTM1Q6UX27 236 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 RBM43Q6ZSC3 357 aaKnown RBP11.4□□□□□ -0.58
LINC00239-201ENST00000556973 TRIM59Q8IWR1 403 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 HS6ST3Q8IZP7 471 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 B3GALNT2Q8NCR0 500 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 EDAQ92838 391 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 SEMA4DQ92854 862 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 ELMO3Q96BJ8 720 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 PCED1BQ96HM7 432 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 CEP295NLQ96MC4 621 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 MED15Q96RN5 788 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 LRRC3Q9BY71 257 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 BCO2Q9BYV7 579 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 GPR88Q9GZN0 384 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 DNAI2Q9GZS0 605 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 SDCBP2Q9H190 292 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 FAM124BQ9H5Z6 455 aaPredicted RBP11.4□□□□□ -0.58
LINC00239-201ENST00000556973 EPHX3Q9H6B9 360 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 SMYD3Q9H7B4 428 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 KCNK12Q9HB15 430 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 APOBEC3GQ9HC16 384 aaKnown RBP11.4□□□□□ -0.58
LINC00239-201ENST00000556973 GDE1Q9NZC3 331 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 SORCS3Q9UPU3 1222 aa11.4□□□□□ -0.58
LINC00239-201ENST00000556973 MUC3AQ02505 3323 aa11.39□□□□□ -0.59
LINC00239-201ENST00000556973 PTPRDP23468 1912 aa11.39□□□□□ -0.59
LINC00239-201ENST00000556973 MYO10Q9HD67 2058 aa11.39□□□□□ -0.59
LINC00239-201ENST00000556973 ANHXE9PGG2 379 aa11.39□□□□□ -0.59
LINC00239-201ENST00000556973 LRRN2O75325 713 aa11.39□□□□□ -0.59
LINC00239-201ENST00000556973 CSH1P0DML2 217 aa11.39□□□□□ -0.59
LINC00239-201ENST00000556973 CSH2P0DML3 217 aa11.39□□□□□ -0.59
LINC00239-201ENST00000556973 MYL4P12829 197 aa11.39□□□□□ -0.59
LINC00239-201ENST00000556973 RAP1GAPP47736 663 aa11.39□□□□□ -0.59
LINC00239-201ENST00000556973 ZXDAP98168 799 aa11.39□□□□□ -0.59
LINC00239-201ENST00000556973 TDGQ13569 410 aa11.39□□□□□ -0.59
LINC00239-201ENST00000556973 MTMR3Q13615 1198 aa11.39□□□□□ -0.59
LINC00239-201ENST00000556973 TAF12Q16514 161 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms