RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 CSH2P0DML3 217 aa11.35□□□□□ -0.59
SPTLC2-205ENST00000556607 CYP2F1P24903 491 aa11.35□□□□□ -0.59
SPTLC2-205ENST00000556607 PCSK1P29120 753 aa11.35□□□□□ -0.59
SPTLC2-205ENST00000556607 RPS9P46781 194 aaKnown RBP11.35□□□□□ -0.59
SPTLC2-205ENST00000556607 SOX9P48436 509 aa11.35□□□□□ -0.59
SPTLC2-205ENST00000556607 RPL10AP62906 217 aaKnown RBP11.35□□□□□ -0.59
SPTLC2-205ENST00000556607 MTAPQ13126 283 aa11.35□□□□□ -0.59
SPTLC2-205ENST00000556607 PPP2R5DQ14738 602 aa11.35□□□□□ -0.59
SPTLC2-205ENST00000556607 DDR2Q16832 855 aa11.35□□□□□ -0.59
SPTLC2-205ENST00000556607 ARHGAP29Q52LW3 1261 aa11.35□□□□□ -0.59
SPTLC2-205ENST00000556607 INTS6LQ5JSJ4 861 aaKnown RBP11.35□□□□□ -0.59
SPTLC2-205ENST00000556607 SCARA3Q6AZY7 606 aa11.35□□□□□ -0.59
SPTLC2-205ENST00000556607 UNC13DQ70J99 1090 aa11.35□□□□□ -0.59
SPTLC2-205ENST00000556607 MAML2Q8IZL2 1156 aaPredicted RBP11.35□□□□□ -0.59
SPTLC2-205ENST00000556607 TOP6BLQ8N6T0 577 aa11.35□□□□□ -0.59
SPTLC2-205ENST00000556607 OR5B17Q8NGF7 314 aa11.35□□□□□ -0.59
SPTLC2-205ENST00000556607 ZNF507Q8TCN5 953 aa11.35□□□□□ -0.59
SPTLC2-205ENST00000556607 CLDN23Q96B33 292 aa11.35□□□□□ -0.59
SPTLC2-205ENST00000556607 CCDC127Q96BQ5 260 aa11.35□□□□□ -0.59
SPTLC2-205ENST00000556607 RSPRY1Q96DX4 576 aa11.35□□□□□ -0.59
SPTLC2-205ENST00000556607 HPDLQ96IR7 371 aa11.35□□□□□ -0.59
SPTLC2-205ENST00000556607 C7orf25Q9BPX7 421 aa11.35□□□□□ -0.59
SPTLC2-205ENST00000556607 SMG9Q9H0W8 520 aaKnown RBP11.35□□□□□ -0.59
SPTLC2-205ENST00000556607 MAGEF1Q9HAY2 307 aa11.35□□□□□ -0.59
SPTLC2-205ENST00000556607 TRPV5Q9NQA5 729 aa11.35□□□□□ -0.59
SPTLC2-205ENST00000556607 INTS13Q9NVM9 706 aa11.35□□□□□ -0.59
SPTLC2-205ENST00000556607 GTSE1Q9NYZ3 720 aa11.35□□□□□ -0.59
SPTLC2-205ENST00000556607 FANCMQ8IYD8 2048 aa11.35□□□□□ -0.59
SPTLC2-205ENST00000556607 HCRTO43612 131 aa11.34□□□□□ -0.59
SPTLC2-205ENST00000556607 PRAMEF12O95522 483 aa11.34□□□□□ -0.59
SPTLC2-205ENST00000556607 PDGFRBP09619 1106 aa11.34□□□□□ -0.59
SPTLC2-205ENST00000556607 DNM1Q05193 864 aaKnown RBP11.34□□□□□ -0.59
SPTLC2-205ENST00000556607 PKP1Q13835 747 aa11.34□□□□□ -0.59
SPTLC2-205ENST00000556607 SNRNP35Q16560 246 aaKnown RBP11.34□□□□□ -0.59
SPTLC2-205ENST00000556607 SOWAHAQ2M3V2 549 aa11.34□□□□□ -0.59
SPTLC2-205ENST00000556607 ZNF528Q3MIS6 628 aa11.34□□□□□ -0.59
SPTLC2-205ENST00000556607 ATL3Q6DD88 541 aa11.34□□□□□ -0.59
SPTLC2-205ENST00000556607 CC2D1AQ6P1N0 951 aaPredicted RBP11.34□□□□□ -0.59
SPTLC2-205ENST00000556607 HS2ST1Q7LGA3 356 aa11.34□□□□□ -0.59
SPTLC2-205ENST00000556607 OSTM1Q86WC4 334 aa11.34□□□□□ -0.59
SPTLC2-205ENST00000556607 WDR49Q8IV35 697 aa11.34□□□□□ -0.59
SPTLC2-205ENST00000556607 GRAMD1CQ8IYS0 662 aa11.34□□□□□ -0.59
SPTLC2-205ENST00000556607 KIAA2013Q8IYS2 634 aa11.34□□□□□ -0.59
SPTLC2-205ENST00000556607 CELF5Q8N6W0 485 aaKnown RBP11.34□□□□□ -0.59
SPTLC2-205ENST00000556607 MRPS31Q92665 395 aaKnown RBP11.34□□□□□ -0.59
SPTLC2-205ENST00000556607 MKNK1Q9BUB5 465 aa11.34□□□□□ -0.59
SPTLC2-205ENST00000556607 SLC46A2Q9BY10 475 aa11.34□□□□□ -0.59
SPTLC2-205ENST00000556607 SNX25Q9H3E2 840 aa11.34□□□□□ -0.59
SPTLC2-205ENST00000556607 C8orf33Q9H7E9 229 aaPredicted RBP11.34□□□□□ -0.59
SPTLC2-205ENST00000556607 IL21Q9HBE4 155 aa11.34□□□□□ -0.59
SPTLC2-205ENST00000556607 TRPC7Q9HCX4 862 aa11.34□□□□□ -0.59
SPTLC2-205ENST00000556607 AGPAT3Q9NRZ7 376 aa11.34□□□□□ -0.59
SPTLC2-205ENST00000556607 GDAP2Q9NXN4 497 aa11.34□□□□□ -0.59
SPTLC2-205ENST00000556607 OBP2AQ9NY56 170 aa11.34□□□□□ -0.59
SPTLC2-205ENST00000556607 NCDNQ9UBB6 729 aa11.34□□□□□ -0.59
SPTLC2-205ENST00000556607 MAGEC2Q9UBF1 373 aaPredicted RBP11.34□□□□□ -0.59
SPTLC2-205ENST00000556607 UXTQ9UBK9 157 aaPredicted RBP11.34□□□□□ -0.59
SPTLC2-205ENST00000556607 SERTAD1Q9UHV2 236 aa11.34□□□□□ -0.59
SPTLC2-205ENST00000556607 SIX4Q9UIU6 781 aa11.34□□□□□ -0.59
SPTLC2-205ENST00000556607 USP34Q70CQ2 3546 aa11.34□□□□□ -0.59
SPTLC2-205ENST00000556607 SPECC1L-ADORA2AF8WAN1 911 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 EXOC3O60645 756 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 PHACTR2O75167 634 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 F11P03951 625 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 GRIK1P39086 918 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 CCR3P51677 355 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 NLRP12P59046 1061 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 PSMC1P62191 440 aaKnown RBP11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 TNNC1P63316 161 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 CYP27A1Q02318 531 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 TNK2Q07912 1038 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 FCHO2Q0JRZ9 810 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 FZD5Q13467 585 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 TRPC3Q13507 836 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 CUL4BQ13620 913 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 LRRC32Q14392 662 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 PON2Q15165 354 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 RESP18Q5W5W9 173 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 TXNDC8Q6A555 127 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 C1orf228Q6PIY5 440 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 C4orf50Q6ZRC1 276 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 DPH6Q7L8W6 267 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 TRAPPC11Q7Z392 1133 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 CMTM8Q8IZV2 173 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 DCLK2Q8N568 766 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 FSIP1Q8NA03 581 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 XXYLT1Q8NBI6 393 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 OR6B3Q8NGW1 331 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 LEO1Q8WVC0 666 aaPredicted RBP11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 MSANTD3Q96H12 275 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 SYT15Q9BQS2 421 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 CHRDQ9H2X0 955 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 GKN1Q9NS71 199 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 RBM12Q9NTZ6 932 aaKnown RBP11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 EXOC1Q9NV70 894 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 ZSCAN32Q9NX65 697 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 PCDHGA2Q9Y5H1 932 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 UBE4BO95155 1302 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 PTPRJQ12913 1337 aa11.33□□□□□ -0.6
SPTLC2-205ENST00000556607 PVALEFA0A1B0GWK0 134 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms