RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 RAD23BP54727 409 aa14.95□□□□□ -0.02
VIPAS39-208ENST00000556412 RBM10P98175 930 aaKnown RBP14.95□□□□□ -0.02
VIPAS39-208ENST00000556412 ADCY1Q08828 1119 aa14.95□□□□□ -0.02
VIPAS39-208ENST00000556412 HYAL1Q12794 435 aa14.95□□□□□ -0.02
VIPAS39-208ENST00000556412 GPR17Q13304 367 aa14.95□□□□□ -0.02
VIPAS39-208ENST00000556412 DUSP6Q16828 381 aa14.95□□□□□ -0.02
VIPAS39-208ENST00000556412 PPFIBP1Q86W92 1011 aa14.95□□□□□ -0.02
VIPAS39-208ENST00000556412 SPATA2LQ8IUW3 424 aaPredicted RBP14.95□□□□□ -0.02
VIPAS39-208ENST00000556412 UBR7Q8N806 425 aa14.95□□□□□ -0.02
VIPAS39-208ENST00000556412 C12orf29Q8N999 325 aa14.95□□□□□ -0.02
VIPAS39-208ENST00000556412 CPLX3Q8WVH0 158 aa14.95□□□□□ -0.02
VIPAS39-208ENST00000556412 MYLPFQ96A32 169 aa14.95□□□□□ -0.02
VIPAS39-208ENST00000556412 MED10Q9BTT4 135 aa14.95□□□□□ -0.02
VIPAS39-208ENST00000556412 NLRC5Q86WI3 1866 aa14.95□□□□□ -0.02
VIPAS39-208ENST00000556412 F8VZ95 297 aa14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 FOXN3O00409 490 aaPredicted RBP14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 PRRG1O14668 218 aa14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 CALCAP01258 141 aa14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 CCDC130P13994 396 aa14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 ELF1P32519 619 aa14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 PBX1P40424 430 aa14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 ZNF75DP51815 510 aa14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 SKIV2LQ15477 1246 aaKnown RBP14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 MAPRE1Q15691 268 aaKnown RBP14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 SLC4A11Q8NBS3 891 aa14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 ATAD1Q8NBU5 361 aa14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 ZNF461Q8TAF7 563 aa14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 MYCBPAPQ8TBZ2 947 aa14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 SHC3Q92529 594 aa14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 JAKMIP2Q96AA8 810 aa14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 PCED1BQ96HM7 432 aa14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 CDCA3Q99618 268 aaPredicted RBP14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 NAA15Q9BXJ9 866 aaKnown RBP14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 STK33Q9BYT3 514 aa14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 RHOBTB2Q9BYZ6 727 aa14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 FAM124BQ9H5Z6 455 aaPredicted RBP14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 CYP4F11Q9HBI6 524 aa14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 CEP72Q9P209 647 aa14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 HCFC2Q9Y5Z7 792 aa14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 PLXNA4Q9HCM2 1894 aa14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 SCN1AP35498 2009 aa14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 MTMR11A4FU01 709 aa14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 RNF225M0QZC1 329 aaPredicted RBP14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 CYP26A1O43174 497 aa14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 POU3F3P20264 500 aaPredicted RBP14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 ADORA2BP29275 332 aa14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 NFE2Q16621 373 aaPredicted RBP14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 LIN9Q5TKA1 542 aa14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 SPECC1LQ69YQ0 1117 aa14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 SEPT5Q99719 369 aaPredicted RBP14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 MAN1C1Q9NR34 630 aa14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 AFF4Q9UHB7 1163 aaKnown RBP14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 SLC27A5Q9Y2P5 690 aa14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 PCDHB5Q9Y5E4 795 aa14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 CDH23Q9H251 3354 aa14.94□□□□□ -0.02
VIPAS39-208ENST00000556412 CLDN5O00501 218 aa14.93□□□□□ -0.02
VIPAS39-208ENST00000556412 LINC01565O15544 149 aa14.93□□□□□ -0.02
VIPAS39-208ENST00000556412 GFPT2O94808 682 aa14.93□□□□□ -0.02
VIPAS39-208ENST00000556412 ATF2P15336 505 aa14.93□□□□□ -0.02
VIPAS39-208ENST00000556412 ARID5AQ03989 594 aa14.93□□□□□ -0.02
VIPAS39-208ENST00000556412 DUSP4Q13115 394 aa14.93□□□□□ -0.02
VIPAS39-208ENST00000556412 MGAT5BQ3V5L5 792 aa14.93□□□□□ -0.02
VIPAS39-208ENST00000556412 TPGS2Q68CL5 300 aa14.93□□□□□ -0.02
VIPAS39-208ENST00000556412 FAM171BQ6P995 826 aa14.93□□□□□ -0.02
VIPAS39-208ENST00000556412 C4orf50Q6ZRC1 276 aa14.93□□□□□ -0.02
VIPAS39-208ENST00000556412 TMC6Q7Z403 805 aa14.93□□□□□ -0.02
VIPAS39-208ENST00000556412 VSTM4Q8IW00 320 aa14.93□□□□□ -0.02
VIPAS39-208ENST00000556412 CRYBG2Q8N1P7 616 aa14.93□□□□□ -0.02
VIPAS39-208ENST00000556412 KREMEN2Q8NCW0 462 aa14.93□□□□□ -0.02
VIPAS39-208ENST00000556412 SLC2A14Q8TDB8 520 aa14.93□□□□□ -0.02
VIPAS39-208ENST00000556412 PKMYT1Q99640 499 aa14.93□□□□□ -0.02
VIPAS39-208ENST00000556412 NUP58Q9BVL2 599 aa14.93□□□□□ -0.02
VIPAS39-208ENST00000556412 GPR88Q9GZN0 384 aa14.93□□□□□ -0.02
VIPAS39-208ENST00000556412 GRPEL1Q9HAV7 217 aa14.93□□□□□ -0.02
VIPAS39-208ENST00000556412 ACP6Q9NPH0 428 aa14.93□□□□□ -0.02
VIPAS39-208ENST00000556412 SOAT2O75908 522 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 ABLIM3O94929 683 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 BDNFP23560 247 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 BRD2P25440 801 aaKnown RBP14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 SSTR3P32745 418 aaPredicted RBP14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 STAT1P42224 750 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 SGO2Q562F6 1265 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 TTC9BQ8N6N2 239 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 VN1R2Q8NFZ6 395 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 SLC7A14Q8TBB6 771 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 SLC22A17Q8WUG5 538 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 CYFIP2Q96F07 1278 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 B3GNT5Q9BYG0 378 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 ZNF518BQ9C0D4 1074 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 CLDND1Q9NY35 253 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 DAAM1Q9Y4D1 1078 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 ITIH6Q6UXX5 1313 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 SEC24AO95486 1093 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 ADCY5O95622 1261 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 C8AP07357 584 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 PAEPP09466 180 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 SRGAP2BP0DMP2 458 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 CYP2F1P24903 491 aa14.92□□□□□ -0.02
VIPAS39-208ENST00000556412 GNA15P30679 374 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms