RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 CYP3A5P20815 502 aa13.3□□□□□ -0.28
PPP4R3A-206ENST00000554943 SKIV2L2P42285 1042 aaKnown RBP13.3□□□□□ -0.28
PPP4R3A-206ENST00000554943 ZNF268Q14587 947 aaPredicted RBP13.3□□□□□ -0.28
PPP4R3A-206ENST00000554943 PPP1R7Q15435 360 aa13.3□□□□□ -0.28
PPP4R3A-206ENST00000554943 CCDC197Q8NCU1 140 aa13.3□□□□□ -0.28
PPP4R3A-206ENST00000554943 FAF2Q96CS3 445 aa13.3□□□□□ -0.28
PPP4R3A-206ENST00000554943 CABS1Q96KC9 395 aa13.3□□□□□ -0.28
PPP4R3A-206ENST00000554943 DPYSL4O14531 572 aa13.3□□□□□ -0.28
PPP4R3A-206ENST00000554943 CAPN15O75808 1086 aa13.3□□□□□ -0.28
PPP4R3A-206ENST00000554943 IL18RAPO95256 599 aa13.3□□□□□ -0.28
PPP4R3A-206ENST00000554943 GH1P01241 217 aa13.3□□□□□ -0.28
PPP4R3A-206ENST00000554943 CD58P19256 250 aa13.3□□□□□ -0.28
PPP4R3A-206ENST00000554943 ATP5DP30049 168 aa13.3□□□□□ -0.28
PPP4R3A-206ENST00000554943 GPD2P43304 727 aa13.3□□□□□ -0.28
PPP4R3A-206ENST00000554943 MAGEA4P43358 317 aa13.3□□□□□ -0.28
PPP4R3A-206ENST00000554943 SNX1Q13596 522 aa13.3□□□□□ -0.28
PPP4R3A-206ENST00000554943 MTFR1Q15390 333 aa13.3□□□□□ -0.28
PPP4R3A-206ENST00000554943 LY6KQ17RY6 165 aa13.3□□□□□ -0.28
PPP4R3A-206ENST00000554943 DUOXA2Q1HG44 320 aa13.3□□□□□ -0.28
PPP4R3A-206ENST00000554943 C1orf127Q8N9H9 656 aa13.3□□□□□ -0.28
PPP4R3A-206ENST00000554943 KHSRPQ92945 711 aaKnown RBP eCLIP13.3□□□□□ -0.282e-6■■■□□ 16
PPP4R3A-206ENST00000554943 BICD1Q96G01 975 aa13.3□□□□□ -0.28
PPP4R3A-206ENST00000554943 TTC25Q96NG3 672 aa13.3□□□□□ -0.28
PPP4R3A-206ENST00000554943 RABGEF1Q9UJ41 708 aa13.3□□□□□ -0.28
PPP4R3A-206ENST00000554943 TPX2Q9ULW0 747 aaKnown RBP13.3□□□□□ -0.28
PPP4R3A-206ENST00000554943 COL1A2P08123 1366 aa13.3□□□□□ -0.28
PPP4R3A-206ENST00000554943 SCN1AP35498 2009 aa13.3□□□□□ -0.28
PPP4R3A-206ENST00000554943 TJP3O95049 919 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 SLC25A27O95847 323 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 BRD2P25440 801 aaKnown RBP13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 NR1H3Q13133 447 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 PASD1Q8IV76 773 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 AGGF1Q8N302 714 aaeCLIP13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 CDT1Q9H211 546 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 PNPLA8Q9NP80 782 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 ARHGEF3Q9NR81 526 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 HAUS2Q9NVX0 235 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 LRRIQ4A6NIV6 560 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 CXCL11O14625 94 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 PRKCBP05771 671 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 DHRS4L1P0CG22 281 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 FGFR1P11362 822 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 PCK1P35558 622 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 P3H1Q32P28 736 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 BNIPLQ7Z465 357 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 PRUNE1Q86TP1 453 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 THNSL1Q8IYQ7 743 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 CPT1BQ92523 772 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 KLC4Q9NSK0 619 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 BCCIPQ9P287 314 aaKnown RBP eCLIP13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 TJP2Q9UDY2 1190 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 SLC24A2Q9UI40 661 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 SPDYE5A6NIY4 337 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 NDC80O14777 642 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 ERBB2P04626 1255 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 ATICP31939 592 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 MAGEA3P43357 314 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 SEZ6Q53EL9 994 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 TAPT1Q6NXT6 567 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 ADGRD1Q6QNK2 874 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 ILDR2Q71H61 639 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 TRPM8Q7Z2W7 1104 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 TMEM192Q8IY95 271 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 SHCBP1Q8NEM2 672 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 CNKSR2Q8WXI2 1034 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 SGSM3Q96HU1 749 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 MCEEQ96PE7 176 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 TWNKQ96RR1 684 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 IMPG2Q9BZV3 1241 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 STRIP2Q9ULQ0 834 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 AGTPBP1Q9UPW5 1226 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 STARD13Q9Y3M8 1113 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 NME7Q9Y5B8 376 aa13.29□□□□□ -0.28
PPP4R3A-206ENST00000554943 FOXO6A8MYZ6 492 aa13.28□□□□□ -0.28
PPP4R3A-206ENST00000554943 PECAM1P16284 738 aaPredicted RBP13.28□□□□□ -0.28
PPP4R3A-206ENST00000554943 KDELR1P24390 212 aa13.28□□□□□ -0.28
PPP4R3A-206ENST00000554943 IL4RP24394 825 aa13.28□□□□□ -0.28
PPP4R3A-206ENST00000554943 ELF3P78545 371 aaPredicted RBP13.28□□□□□ -0.28
PPP4R3A-206ENST00000554943 ARHGAP1Q07960 439 aa13.28□□□□□ -0.28
PPP4R3A-206ENST00000554943 FASTKD3Q14CZ7 662 aaKnown RBP13.28□□□□□ -0.28
PPP4R3A-206ENST00000554943 CYB5D1Q6P9G0 228 aa13.28□□□□□ -0.28
PPP4R3A-206ENST00000554943 TMEM35BQ8NCS4 154 aa13.28□□□□□ -0.28
PPP4R3A-206ENST00000554943 JOSD2Q8TAC2 188 aa13.28□□□□□ -0.28
PPP4R3A-206ENST00000554943 CPXM1Q96SM3 734 aa13.28□□□□□ -0.28
PPP4R3A-206ENST00000554943 ELOVL4Q9GZR5 314 aa13.28□□□□□ -0.28
PPP4R3A-206ENST00000554943 SMAPO00193 183 aa13.28□□□□□ -0.28
PPP4R3A-206ENST00000554943 ACSL3O95573 720 aa13.28□□□□□ -0.28
PPP4R3A-206ENST00000554943 KRT10P13645 584 aa13.28□□□□□ -0.28
PPP4R3A-206ENST00000554943 RFC1P35251 1148 aaPredicted RBP13.28□□□□□ -0.28
PPP4R3A-206ENST00000554943 GDF10P55107 478 aa13.28□□□□□ -0.28
PPP4R3A-206ENST00000554943 NCALDP61601 193 aa13.28□□□□□ -0.28
PPP4R3A-206ENST00000554943 ARCQ7LC44 396 aa13.28□□□□□ -0.28
PPP4R3A-206ENST00000554943 PEBP4Q96S96 227 aa13.28□□□□□ -0.28
PPP4R3A-206ENST00000554943 PDZD7Q9H5P4 517 aa13.28□□□□□ -0.28
PPP4R3A-206ENST00000554943 USP15Q9Y4E8 981 aaPredicted RBP13.28□□□□□ -0.28
PPP4R3A-206ENST00000554943 GPR25O00155 361 aa13.28□□□□□ -0.28
PPP4R3A-206ENST00000554943 GABBR2O75899 941 aa13.28□□□□□ -0.28
PPP4R3A-206ENST00000554943 MCF2P10911 925 aa13.28□□□□□ -0.28
PPP4R3A-206ENST00000554943 YWHAEP62258 255 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms