RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 C8orf49Q96NF6 230 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 RBM15Q96T37 977 aaKnown RBP eCLIP4.82□□□□□ -1.64
VTI1B-203ENST00000554636 UBA5Q9GZZ9 404 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 LSG1Q9H089 658 aaKnown RBP4.82□□□□□ -1.64
VTI1B-203ENST00000554636 UPF3AQ9H1J1 476 aaKnown RBP4.82□□□□□ -1.64
VTI1B-203ENST00000554636 KAT14Q9H8E8 782 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 SMURF1Q9HCE7 757 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 XPNPEP3Q9NQH7 507 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 CYP39A1Q9NYL5 469 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 CNPY2Q9Y2B0 182 aa4.82□□□□□ -1.64
VTI1B-203ENST00000554636 RBM8AQ9Y5S9 174 aaKnown RBP4.82□□□□□ -1.64
VTI1B-203ENST00000554636 A0A1W2PPC1 479 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 ESYT3A0FGR9 886 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 NPEPPSL1A6NEC2 478 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 E7EWF7 191 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 WNT9AO14904 365 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 EFCAB14O75071 495 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 DUSP11O75319 330 aaKnown RBP4.81□□□□□ -1.64
VTI1B-203ENST00000554636 PARP1P09874 1014 aaKnown RBP4.81□□□□□ -1.64
VTI1B-203ENST00000554636 INSRRP14616 1297 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 EDNRBP24530 442 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 ADCYAP1R1P41586 468 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 ALDH5A1P51649 535 aaPredicted RBP4.81□□□□□ -1.64
VTI1B-203ENST00000554636 RRADP55042 308 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 RPS6P62753 249 aaKnown RBP4.81□□□□□ -1.64
VTI1B-203ENST00000554636 BAATQ14032 418 aaPredicted RBP4.81□□□□□ -1.64
VTI1B-203ENST00000554636 GRM4Q14833 912 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 QRICH1Q2TAL8 776 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 CCDC144BQ3MJ40 725 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 TM4SF20Q53R12 229 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 TMEM63BQ5T3F8 832 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 TAPT1Q6NXT6 567 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 SLC39A5Q6ZMH5 540 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 Q6ZUG5 572 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 RNF180Q86T96 592 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 GGNQ86UU5 652 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 FBXO16Q8IX29 292 aaPredicted RBP4.81□□□□□ -1.64
VTI1B-203ENST00000554636 ADGRF4Q8IZF3 695 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 LILRB2Q8N423 598 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 MAP4K1Q92918 833 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 FERMT2Q96AC1 680 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 MTMR8Q96EF0 704 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 SCLYQ96I15 445 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 MAGEB10Q96LZ2 347 aaPredicted RBP4.81□□□□□ -1.64
VTI1B-203ENST00000554636 GPR20Q99678 358 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 UBAC1Q9BSL1 405 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 ABHD16BQ9H3Z7 469 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 PPP4R1LQ9P1A2 415 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 MAD2L2Q9UI95 211 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 PNMA2Q9UL42 364 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 FAM184BQ9ULE4 1060 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 SCN10AQ9Y5Y9 1956 aa4.81□□□□□ -1.64
VTI1B-203ENST00000554636 KIAA1217Q5T5P2 1943 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 ABCB11O95342 1321 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 LOC102724159A0A0B4J2E5 919 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 PTPDC1A2A3K4 754 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 ASB14A6NK59 587 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 SH2B2O14492 632 aaPredicted RBP4.8□□□□□ -1.64
VTI1B-203ENST00000554636 IFIT3O14879 490 aaKnown RBP4.8□□□□□ -1.64
VTI1B-203ENST00000554636 CYTH3O43739 400 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 KRT37O76014 449 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 C4BPAP04003 597 aaKnown RBP4.8□□□□□ -1.64
VTI1B-203ENST00000554636 MMEP08473 750 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 ZNF888P0CJ79 500 aaPredicted RBP4.8□□□□□ -1.64
VTI1B-203ENST00000554636 CALML3P27482 149 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 ACLYP53396 1101 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 GHRHRQ02643 423 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 TLE2Q04725 743 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 TROAPQ12815 778 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 TRDNQ13061 729 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 NECTIN1Q15223 517 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 PWP2Q15269 919 aaKnown RBP4.8□□□□□ -1.64
VTI1B-203ENST00000554636 WDR72Q3MJ13 1102 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 USH1GQ495M9 461 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 LCE5AQ5TCM9 118 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 CREB3L3Q68CJ9 461 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 PKN3Q6P5Z2 889 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 RNF207Q6ZRF8 634 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 TLK2Q86UE8 772 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 GSTCDQ8NEC7 633 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 NCOA7Q8NI08 942 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 TBC1D5Q92609 795 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 LRRC37BQ96QE4 947 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 ZSWIM4Q9H7M6 989 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 JMJD4Q9H9V9 463 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 LY9Q9HBG7 655 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 VTA1Q9NP79 307 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 PDGFCQ9NRA1 345 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 UCKL1Q9NWZ5 548 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 COL20A1Q9P218 1284 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 ADD3Q9UEY8 706 aaKnown RBP4.8□□□□□ -1.64
VTI1B-203ENST00000554636 ADAM29Q9UKF5 820 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 ATP11BQ9Y2G3 1177 aa4.8□□□□□ -1.64
VTI1B-203ENST00000554636 GRIN2DO15399 1336 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 TRIM43BA6NCK2 446 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 KLRF2D3W0D1 207 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 KIAA0355O15063 1070 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 PQBP1O60828 265 aaKnown RBP4.79□□□□□ -1.64
VTI1B-203ENST00000554636 ARIH2O95376 493 aa4.79□□□□□ -1.64
VTI1B-203ENST00000554636 CLTBP09497 229 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms