RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 GSTA1P08263 222 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 NUDT17P0C025 328 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 LINGO3P0C6S8 592 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 MAOBP27338 520 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 GRK4P32298 578 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 SLC16A2P36021 539 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 GNALP38405 381 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 ADH7P40394 386 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 TUBP50607 506 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 ADCY7P51828 1080 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 EIF3BP55884 814 aaKnown RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 JAM2P57087 298 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 SLC8A3P57103 927 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 MTMR1Q13613 665 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 AUHQ13825 339 aaKnown RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 ITIH4Q14624 930 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 COG2Q14746 738 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 EPHA7Q15375 998 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 GNPTABQ3T906 1256 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 GALNTL6Q49A17 601 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 KIAA1755Q5JYT7 1200 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 THEMIS2Q5TEJ8 643 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 NUGGCQ68CJ6 796 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 CDCA2Q69YH5 1023 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 CAPRIN2Q6IMN6 1127 aaKnown RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 CGB2Q6NT52 195 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 MIS18BP1Q6P0N0 1132 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 CRELD2Q6UXH1 353 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 SLC30A10Q6XR72 485 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 EXOC3L1Q86VI1 746 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 HOOK3Q86VS8 718 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 SFR1Q86XK3 245 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 MCATQ8IVS2 390 aaKnown RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 SLFN12Q8IYM2 578 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 SLC7A3Q8WY07 619 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 P3H4Q92791 437 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 UTP4Q969X6 686 aaKnown RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 KLHL29Q96CT2 875 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 BTBD6Q96KE9 485 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 PWWP2AQ96N64 755 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 LBHD1Q9BQE6 289 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 MXD3Q9BW11 206 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 TRIM39Q9HCM9 518 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 AVENQ9NQS1 362 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 USP40Q9NVE5 1235 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 INTS7Q9NVH2 962 aaKnown RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 BTG4Q9NY30 223 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 ADAM22Q9P0K1 906 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 APEX2Q9UBZ4 518 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 ARMCX3Q9UH62 379 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 AMFRQ9UKV5 643 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 PCDHA12Q9UN75 941 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 SNED1Q8TER0 1413 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 STRCP1A6NGW2 1772 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 TMEM120BA0PK00 339 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 PRAMEF27A3QJZ7 478 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 IQCA1LA6NCM1 817 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 CCDC169A6NNP5 214 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 RASGRF2O14827 1237 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 RIPK2O43353 540 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 GNA14O95837 355 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 CYP11A1P05108 521 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 EPHX1P07099 455 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 PDHA1P08559 390 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 ALADP13716 330 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 GM2AP17900 193 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 VCAM1P19320 739 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 SOX5P35711 763 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 CHKAP35790 457 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 MSH2P43246 934 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 EPHB1P54762 984 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 SLC12A3P55017 1021 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 CYP4A11Q02928 519 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 PPATQ06203 517 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 MAPK7Q13164 816 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 RIPK1Q13546 671 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 SNX1Q13596 522 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 PDIA5Q14554 519 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 PLS1Q14651 629 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 TRIP13Q15645 432 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 IFI16Q16666 785 aaKnown RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 ARHGAP44Q17R89 818 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 TRIM61Q5EBN2 209 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 ANKRD20A2Q5SQ80 823 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 ANKRD20A1Q5TYW2 823 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 ANKRD20A3Q5VUR7 823 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 PSAPL1Q6NUJ1 521 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 USP17L6PQ6QN14 398 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 VSTM1Q6UX27 236 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 C20orf204Q6ZNR8 217 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 PRUNE1Q86TP1 453 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 CCDC65Q8IXS2 484 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 PRELID2Q8N945 189 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 SLC30A5Q8TAD4 765 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 SLC20A1Q8WUM9 679 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 DYDC1Q8WWB3 177 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 DDX1Q92499 740 aaKnown RBP2.73□□□□□ -1.97
PRPF39-207ENST00000554439 PGM2Q96G03 612 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 TMEM237Q96Q45 408 aa2.73□□□□□ -1.97
PRPF39-207ENST00000554439 REEP2Q9BRK0 252 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms