RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 ELF2Q15723 593 aa12.77□□□□□ -0.37
SRP54-203ENST00000553544 ZBTB6Q15916 424 aa12.77□□□□□ -0.37
SRP54-203ENST00000553544 TAF12Q16514 161 aa12.77□□□□□ -0.37
SRP54-203ENST00000553544 KYAT1Q16773 422 aa12.77□□□□□ -0.37
SRP54-203ENST00000553544 PLK5Q496M5 336 aa12.77□□□□□ -0.37
SRP54-203ENST00000553544 ZC2HC1CQ53FD0 456 aaPredicted RBP12.77□□□□□ -0.37
SRP54-203ENST00000553544 OVOS1Q6IE37 1185 aa12.77□□□□□ -0.37
SRP54-203ENST00000553544 PKN3Q6P5Z2 889 aa12.77□□□□□ -0.37
SRP54-203ENST00000553544 DYMQ7RTS9 669 aa12.77□□□□□ -0.37
SRP54-203ENST00000553544 EXOC4Q96A65 974 aa12.77□□□□□ -0.37
SRP54-203ENST00000553544 BICD1Q96G01 975 aa12.77□□□□□ -0.37
SRP54-203ENST00000553544 ZNF396Q96N95 335 aaPredicted RBP12.77□□□□□ -0.37
SRP54-203ENST00000553544 PANK2Q9BZ23 570 aa12.77□□□□□ -0.37
SRP54-203ENST00000553544 DUSP15Q9H1R2 295 aaPredicted RBP12.77□□□□□ -0.37
SRP54-203ENST00000553544 ZHX3Q9H4I2 956 aa12.77□□□□□ -0.37
SRP54-203ENST00000553544 HSFX1Q9UBD0 423 aa12.77□□□□□ -0.37
SRP54-203ENST00000553544 SEL1LQ9UBV2 794 aa12.77□□□□□ -0.37
SRP54-203ENST00000553544 ZMYM5Q9UJ78 669 aa12.77□□□□□ -0.37
SRP54-203ENST00000553544 STYXL1Q9Y6J8 313 aa12.77□□□□□ -0.37
SRP54-203ENST00000553544 FRMD3A2A2Y4 597 aa12.76□□□□□ -0.37
SRP54-203ENST00000553544 OGTO15294 1046 aa12.76□□□□□ -0.37
SRP54-203ENST00000553544 CAVIN2O95810 425 aa12.76□□□□□ -0.37
SRP54-203ENST00000553544 CYP3A5P20815 502 aa12.76□□□□□ -0.37
SRP54-203ENST00000553544 CDC25CP30307 473 aa12.76□□□□□ -0.37
SRP54-203ENST00000553544 CREB5Q02930 508 aa12.76□□□□□ -0.37
SRP54-203ENST00000553544 PKP1Q13835 747 aa12.76□□□□□ -0.37
SRP54-203ENST00000553544 VEPH1Q14D04 833 aa12.76□□□□□ -0.37
SRP54-203ENST00000553544 FSTL4Q6MZW2 842 aa12.76□□□□□ -0.37
SRP54-203ENST00000553544 SFR1Q86XK3 245 aa12.76□□□□□ -0.37
SRP54-203ENST00000553544 GCNAQ96QF7 691 aa12.76□□□□□ -0.37
SRP54-203ENST00000553544 FAM83CQ9BQN1 747 aa12.76□□□□□ -0.37
SRP54-203ENST00000553544 SLC46A2Q9BY10 475 aa12.76□□□□□ -0.37
SRP54-203ENST00000553544 TUBGCP4Q9UGJ1 667 aa12.76□□□□□ -0.37
SRP54-203ENST00000553544 CPSF3Q9UKF6 684 aaKnown RBP12.76□□□□□ -0.37
SRP54-203ENST00000553544 COL4A2P08572 1712 aa12.76□□□□□ -0.37
SRP54-203ENST00000553544 ZFYVE26Q68DK2 2539 aa12.76□□□□□ -0.37
SRP54-203ENST00000553544 ASPMQ8IZT6 3477 aa12.75□□□□□ -0.37
SRP54-203ENST00000553544 MTMR11A4FU01 709 aa12.75□□□□□ -0.37
SRP54-203ENST00000553544 TMEM8BA6NDV4 472 aa12.75□□□□□ -0.37
SRP54-203ENST00000553544 LACTBL1A8MY62 500 aa12.75□□□□□ -0.37
SRP54-203ENST00000553544 ANKRD63C9JTQ0 380 aa12.75□□□□□ -0.37
SRP54-203ENST00000553544 GIPC1O14908 333 aa12.75□□□□□ -0.37
SRP54-203ENST00000553544 XPOTO43592 962 aaKnown RBP12.75□□□□□ -0.37
SRP54-203ENST00000553544 PRAMEF12O95522 483 aa12.75□□□□□ -0.37
SRP54-203ENST00000553544 F13A1P00488 732 aa12.75□□□□□ -0.37
SRP54-203ENST00000553544 CEACAM1P13688 526 aa12.75□□□□□ -0.37
SRP54-203ENST00000553544 TYMPP19971 482 aa12.75□□□□□ -0.37
SRP54-203ENST00000553544 DRD1P21728 446 aa12.75□□□□□ -0.37
SRP54-203ENST00000553544 PAX3P23760 479 aa12.75□□□□□ -0.37
SRP54-203ENST00000553544 STAT6P42226 847 aa12.75□□□□□ -0.37
SRP54-203ENST00000553544 MATR3P43243 847 aaKnown RBP eCLIP12.75□□□□□ -0.37
SRP54-203ENST00000553544 FASNP49327 2511 aaKnown RBP12.75□□□□□ -0.37
SRP54-203ENST00000553544 AARSP49588 968 aaKnown RBP eCLIP12.75□□□□□ -0.37
SRP54-203ENST00000553544 TSC2P49815 1807 aa12.75□□□□□ -0.37
SRP54-203ENST00000553544 GALK1P51570 392 aa12.75□□□□□ -0.37
SRP54-203ENST00000553544 SPAG1Q07617 926 aa12.75□□□□□ -0.37
SRP54-203ENST00000553544 FOXC1Q12948 553 aa12.75□□□□□ -0.37
SRP54-203ENST00000553544 ENOX2Q16206 610 aaKnown RBP12.75□□□□□ -0.37
SRP54-203ENST00000553544 E2F4Q16254 413 aa12.75□□□□□ -0.37
SRP54-203ENST00000553544 FBXO43Q4G163 708 aa12.75□□□□□ -0.37
SRP54-203ENST00000553544 SH3PXD2AQ5TCZ1 1133 aa12.75□□□□□ -0.37
SRP54-203ENST00000553544 TCEAL6Q6IPX3 200 aa12.75□□□□□ -0.37
SRP54-203ENST00000553544 CMTM8Q8IZV2 173 aa12.75□□□□□ -0.37
SRP54-203ENST00000553544 TCEAL3Q969E4 200 aa12.75□□□□□ -0.37
SRP54-203ENST00000553544 HVCN1Q96D96 273 aa12.75□□□□□ -0.37
SRP54-203ENST00000553544 KIF12Q96FN5 646 aa12.75□□□□□ -0.37
SRP54-203ENST00000553544 TSPAN18Q96SJ8 248 aa12.75□□□□□ -0.37
SRP54-203ENST00000553544 EDEM2Q9BV94 578 aa12.75□□□□□ -0.37
SRP54-203ENST00000553544 EBF3Q9H4W6 596 aa12.75□□□□□ -0.37
SRP54-203ENST00000553544 OLFML3Q9NRN5 406 aa12.75□□□□□ -0.37
SRP54-203ENST00000553544 EBF1Q9UH73 591 aa12.75□□□□□ -0.37
SRP54-203ENST00000553544 UBQLN1Q9UMX0 589 aaKnown RBP12.75□□□□□ -0.37
SRP54-203ENST00000553544 BCLAF3A2AJT9 711 aaKnown RBP12.74□□□□□ -0.37
SRP54-203ENST00000553544 TISP43B9A030 160 aa12.74□□□□□ -0.37
SRP54-203ENST00000553544 KHNYNO15037 678 aaKnown RBP12.74□□□□□ -0.37
SRP54-203ENST00000553544 CUTAO60888 179 aa12.74□□□□□ -0.37
SRP54-203ENST00000553544 RNF40O75150 1001 aa12.74□□□□□ -0.37
SRP54-203ENST00000553544 SOAT2O75908 522 aa12.74□□□□□ -0.37
SRP54-203ENST00000553544 EGFP01133 1207 aa12.74□□□□□ -0.37
SRP54-203ENST00000553544 GAP43P17677 238 aa12.74□□□□□ -0.37
SRP54-203ENST00000553544 AVPR1AP37288 418 aa12.74□□□□□ -0.37
SRP54-203ENST00000553544 LILRA4P59901 499 aa12.74□□□□□ -0.37
SRP54-203ENST00000553544 POU5F1Q01860 360 aaKnown RBP12.74□□□□□ -0.37
SRP54-203ENST00000553544 KCNA1Q09470 495 aa12.74□□□□□ -0.37
SRP54-203ENST00000553544 ZNF252P-AS1Q0IIN9 211 aa12.74□□□□□ -0.37
SRP54-203ENST00000553544 ACAP1Q15027 740 aa12.74□□□□□ -0.37
SRP54-203ENST00000553544 MGAT5BQ3V5L5 792 aa12.74□□□□□ -0.37
SRP54-203ENST00000553544 FOXD4L5Q5VV16 416 aaPredicted RBP12.74□□□□□ -0.37
SRP54-203ENST00000553544 ATL3Q6DD88 541 aa12.74□□□□□ -0.37
SRP54-203ENST00000553544 SLFN12LQ6IEE8 588 aa12.74□□□□□ -0.37
SRP54-203ENST00000553544 CC2D1AQ6P1N0 951 aaPredicted RBP12.74□□□□□ -0.37
SRP54-203ENST00000553544 SHC4Q6S5L8 630 aa12.74□□□□□ -0.37
SRP54-203ENST00000553544 CD302Q8IX05 232 aa12.74□□□□□ -0.37
SRP54-203ENST00000553544 TMEM130Q8N3G9 435 aa12.74□□□□□ -0.37
SRP54-203ENST00000553544 PDILTQ8N807 584 aa12.74□□□□□ -0.37
SRP54-203ENST00000553544 FOXD4L4Q8WXT5 416 aaPredicted RBP12.74□□□□□ -0.37
SRP54-203ENST00000553544 MSTO1Q9BUK6 570 aa12.74□□□□□ -0.37
SRP54-203ENST00000553544 SMG9Q9H0W8 520 aaKnown RBP12.74□□□□□ -0.37
SRP54-203ENST00000553544 IKZF4Q9H2S9 585 aa12.74□□□□□ -0.37
SRP54-203ENST00000553544 RPF1Q9H9Y2 349 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms