RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 LMO2P25791 158 aa19.74■□□□□ 0.75
PRPF40B-216ENST00000552301 RAP1GAPP47736 663 aa19.74■□□□□ 0.75
PRPF40B-216ENST00000552301 TPD52L1Q16890 204 aaPredicted RBP19.74■□□□□ 0.75
PRPF40B-216ENST00000552301 WDR44Q5JSH3 913 aa19.74■□□□□ 0.75
PRPF40B-216ENST00000552301 SPOPLQ6IQ16 392 aa19.74■□□□□ 0.75
PRPF40B-216ENST00000552301 FBXL13Q8NEE6 735 aa19.74■□□□□ 0.75
PRPF40B-216ENST00000552301 ELMO3Q96BJ8 720 aa19.74■□□□□ 0.75
PRPF40B-216ENST00000552301 MYADMQ96S97 322 aa19.74■□□□□ 0.75
PRPF40B-216ENST00000552301 SRRTQ9BXP5 876 aaKnown RBP19.74■□□□□ 0.75
PRPF40B-216ENST00000552301 ABCB6Q9NP58 842 aa19.74■□□□□ 0.75
PRPF40B-216ENST00000552301 TMLHEQ9NVH6 421 aa19.74■□□□□ 0.75
PRPF40B-216ENST00000552301 CEP72Q9P209 647 aa19.74■□□□□ 0.75
PRPF40B-216ENST00000552301 LIMD1Q9UGP4 676 aa19.74■□□□□ 0.75
PRPF40B-216ENST00000552301 ASB3Q9Y575 518 aa19.74■□□□□ 0.75
PRPF40B-216ENST00000552301 ZFP37Q9Y6Q3 630 aaPredicted RBP19.74■□□□□ 0.75
PRPF40B-216ENST00000552301 MYBPHLA2RUH7 354 aa19.73■□□□□ 0.75
PRPF40B-216ENST00000552301 N4BP1O75113 896 aaKnown RBP19.73■□□□□ 0.75
PRPF40B-216ENST00000552301 CCDC192P0DO97 292 aa19.73■□□□□ 0.75
PRPF40B-216ENST00000552301 HAPLN1P10915 354 aaPredicted RBP19.73■□□□□ 0.75
PRPF40B-216ENST00000552301 MYL4P12829 197 aa19.73■□□□□ 0.75
PRPF40B-216ENST00000552301 NLRP12P59046 1061 aa19.73■□□□□ 0.75
PRPF40B-216ENST00000552301 RPL10AP62906 217 aaKnown RBP19.73■□□□□ 0.75
PRPF40B-216ENST00000552301 ING5Q8WYH8 240 aa19.73■□□□□ 0.75
PRPF40B-216ENST00000552301 MYLPFQ96A32 169 aa19.73■□□□□ 0.75
PRPF40B-216ENST00000552301 FUBP3Q96I24 572 aaKnown RBP eCLIP19.73■□□□□ 0.75
PRPF40B-216ENST00000552301 DNAI2Q9GZS0 605 aa19.73■□□□□ 0.75
PRPF40B-216ENST00000552301 NIF3L1Q9GZT8 377 aa19.73■□□□□ 0.75
PRPF40B-216ENST00000552301 AVENQ9NQS1 362 aaPredicted RBP19.73■□□□□ 0.75
PRPF40B-216ENST00000552301 CDH7Q9ULB5 785 aa19.73■□□□□ 0.75
PRPF40B-216ENST00000552301 DOCK8Q8NF50 2099 aa19.72■□□□□ 0.75
PRPF40B-216ENST00000552301 ATP2C2O75185 946 aa19.72■□□□□ 0.75
PRPF40B-216ENST00000552301 CDH8P55286 799 aa19.72■□□□□ 0.75
PRPF40B-216ENST00000552301 MCCD1P59942 119 aaPredicted RBP19.72■□□□□ 0.75
PRPF40B-216ENST00000552301 CYP27A1Q02318 531 aa19.72■□□□□ 0.75
PRPF40B-216ENST00000552301 CETN1Q12798 172 aa19.72■□□□□ 0.75
PRPF40B-216ENST00000552301 DPCR1Q3MIW9 517 aa19.72■□□□□ 0.75
PRPF40B-216ENST00000552301 MDH1BQ5I0G3 518 aa19.72■□□□□ 0.75
PRPF40B-216ENST00000552301 ITFG1Q8TB96 612 aa19.72■□□□□ 0.75
PRPF40B-216ENST00000552301 FGF13Q92913 245 aa19.72■□□□□ 0.75
PRPF40B-216ENST00000552301 SLC35C1Q96A29 364 aa19.72■□□□□ 0.75
PRPF40B-216ENST00000552301 TNIP3Q96KP6 325 aa19.72■□□□□ 0.75
PRPF40B-216ENST00000552301 PKMYT1Q99640 499 aa19.72■□□□□ 0.75
PRPF40B-216ENST00000552301 CRTAC1Q9NQ79 661 aa19.72■□□□□ 0.75
PRPF40B-216ENST00000552301 RAB20Q9NX57 234 aa19.72■□□□□ 0.75
PRPF40B-216ENST00000552301 EPS15L1Q9UBC2 864 aa19.72■□□□□ 0.75
PRPF40B-216ENST00000552301 MAGEC2Q9UBF1 373 aaPredicted RBP19.72■□□□□ 0.75
PRPF40B-216ENST00000552301 LAMP2P13473 410 aa19.71■□□□□ 0.75
PRPF40B-216ENST00000552301 PTPN1P18031 435 aaKnown RBP19.71■□□□□ 0.75
PRPF40B-216ENST00000552301 ASPAP45381 313 aa19.71■□□□□ 0.75
PRPF40B-216ENST00000552301 PTPN21Q16825 1174 aa19.71■□□□□ 0.75
PRPF40B-216ENST00000552301 CCDC142Q17RM4 750 aa19.71■□□□□ 0.75
PRPF40B-216ENST00000552301 CFAP221Q4G0U5 840 aa19.71■□□□□ 0.75
PRPF40B-216ENST00000552301 CBWD6Q4V339 395 aa19.71■□□□□ 0.75
PRPF40B-216ENST00000552301 CBWD3Q5JTY5 395 aa19.71■□□□□ 0.75
PRPF40B-216ENST00000552301 CBWD5Q5RIA9 395 aa19.71■□□□□ 0.75
PRPF40B-216ENST00000552301 FAM171BQ6P995 826 aa19.71■□□□□ 0.75
PRPF40B-216ENST00000552301 CREBRFQ8IUR6 639 aa19.71■□□□□ 0.75
PRPF40B-216ENST00000552301 SCN4BQ8IWT1 228 aa19.71■□□□□ 0.75
PRPF40B-216ENST00000552301 HS6ST3Q8IZP7 471 aa19.71■□□□□ 0.75
PRPF40B-216ENST00000552301 B3GALNT2Q8NCR0 500 aa19.71■□□□□ 0.75
PRPF40B-216ENST00000552301 MYCBPAPQ8TBZ2 947 aa19.71■□□□□ 0.75
PRPF40B-216ENST00000552301 PSMG2Q969U7 264 aa19.71■□□□□ 0.75
PRPF40B-216ENST00000552301 GCNAQ96QF7 691 aa19.71■□□□□ 0.75
PRPF40B-216ENST00000552301 LPIN3Q9BQK8 851 aa19.71■□□□□ 0.75
PRPF40B-216ENST00000552301 DNAJC25Q9H1X3 360 aa19.71■□□□□ 0.75
PRPF40B-216ENST00000552301 CYP3A43Q9HB55 503 aa19.71■□□□□ 0.75
PRPF40B-216ENST00000552301 SORCS3Q9UPU3 1222 aa19.71■□□□□ 0.75
PRPF40B-216ENST00000552301 ATP8B3O60423 1300 aa19.71■□□□□ 0.75
PRPF40B-216ENST00000552301 BDP1A6H8Y1 2624 aa19.71■□□□□ 0.75
PRPF40B-216ENST00000552301 FGF19O95750 216 aa19.7■□□□□ 0.74
PRPF40B-216ENST00000552301 ASGR2P07307 311 aa19.7■□□□□ 0.74
PRPF40B-216ENST00000552301 ATF6P18850 670 aa19.7■□□□□ 0.74
PRPF40B-216ENST00000552301 CYP2F1P24903 491 aa19.7■□□□□ 0.74
PRPF40B-216ENST00000552301 ANXA13P27216 316 aa19.7■□□□□ 0.74
PRPF40B-216ENST00000552301 MTMR3Q13615 1198 aa19.7■□□□□ 0.74
PRPF40B-216ENST00000552301 SLC5A9Q2M3M2 681 aa19.7■□□□□ 0.74
PRPF40B-216ENST00000552301 CCDC183Q5T5S1 534 aa19.7■□□□□ 0.74
PRPF40B-216ENST00000552301 DNAJB7Q7Z6W7 309 aaPredicted RBP19.7■□□□□ 0.74
PRPF40B-216ENST00000552301 NPAS3Q8IXF0 933 aa19.7■□□□□ 0.74
PRPF40B-216ENST00000552301 GIPC2Q8TF65 315 aa19.7■□□□□ 0.74
PRPF40B-216ENST00000552301 KHSRPQ92945 711 aaKnown RBP eCLIP19.7■□□□□ 0.74
PRPF40B-216ENST00000552301 BCO2Q9BYV7 579 aa19.7■□□□□ 0.74
PRPF40B-216ENST00000552301 SDCBP2Q9H190 292 aa19.7■□□□□ 0.74
PRPF40B-216ENST00000552301 DPEP3Q9H4B8 488 aa19.7■□□□□ 0.74
PRPF40B-216ENST00000552301 APOBEC3GQ9HC16 384 aaKnown RBP19.7■□□□□ 0.74
PRPF40B-216ENST00000552301 IGSF9Q9P2J2 1179 aa19.7■□□□□ 0.74
PRPF40B-216ENST00000552301 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.7■□□□□ 0.74
PRPF40B-216ENST00000552301 PI4K2BG5E9Z4 385 aa19.69■□□□□ 0.74
PRPF40B-216ENST00000552301 CEBPBP17676 345 aa19.69■□□□□ 0.74
PRPF40B-216ENST00000552301 MAGEA11P43364 429 aa19.69■□□□□ 0.74
PRPF40B-216ENST00000552301 FMO5P49326 533 aa19.69■□□□□ 0.74
PRPF40B-216ENST00000552301 EPHA5P54756 1037 aa19.69■□□□□ 0.74
PRPF40B-216ENST00000552301 PRSS36Q5K4E3 855 aa19.69■□□□□ 0.74
PRPF40B-216ENST00000552301 SASS6Q6UVJ0 657 aa19.69■□□□□ 0.74
PRPF40B-216ENST00000552301 VSTM1Q6UX27 236 aa19.69■□□□□ 0.74
PRPF40B-216ENST00000552301 UNC93AQ86WB7 457 aa19.69■□□□□ 0.74
PRPF40B-216ENST00000552301 SEMA4DQ92854 862 aa19.69■□□□□ 0.74
PRPF40B-216ENST00000552301 TCEAL4Q96EI5 215 aa19.69■□□□□ 0.74
PRPF40B-216ENST00000552301 PCED1BQ96HM7 432 aa19.69■□□□□ 0.74
PRPF40B-216ENST00000552301 ELOVL4Q9GZR5 314 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms