RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 COPS2P61201 443 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 MFSD10Q14728 455 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 SLMAPQ14BN4 828 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 PCBP1Q15365 356 aaKnown RBP eCLIP14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 TAF1CQ15572 869 aaPredicted RBP14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 MFSD7Q6UXD7 560 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 XYLT1Q86Y38 959 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 RASAL3Q86YV0 1011 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 PPP1R13LQ8WUF5 828 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 USP6NLQ92738 828 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 CENPHQ9H3R5 247 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 KLHL11Q9NVR0 708 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 DDX56Q9NY93 547 aaKnown RBP14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 SNTG2Q9NY99 539 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 ASIC3Q9UHC3 531 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 MANSC4A6NHS7 340 aaPredicted RBP14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 HAS3O00219 553 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 TP73O15350 636 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 ERBB2P04626 1255 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 PSMA2P25787 234 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 PTPN7P35236 360 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 GPD2P43304 727 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 GABRB2P47870 512 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 PSEN2P49810 448 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 IRX5P78411 483 aaPredicted RBP14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 ADAM17P78536 824 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 IFFO1Q0D2I5 559 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 MYO1EQ12965 1108 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 ZFYVE27Q5T4F4 411 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 NOTUMQ6P988 496 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 SPOCD1Q6ZMY3 1216 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 JOSD2Q8TAC2 188 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 FNIP1Q8TF40 1166 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 LENG1Q96BZ8 264 aaPredicted RBP14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 SNF8Q96H20 258 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 SNX27Q96L92 541 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 CCDC114Q96M63 670 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 OSMRQ99650 979 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 EIF2AQ9BY44 585 aaKnown RBP14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 CXCL16Q9H2A7 254 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 SYNCQ9H7C4 482 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 KIAA1257Q9ULG3 409 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 NEU2Q9Y3R4 380 aa14.8□□□□□ -0.04
RAB3IP-216ENST00000552199 TRPM7Q96QT4 1865 aa14.79□□□□□ -0.04
RAB3IP-216ENST00000552199 M0QYV0 167 aa14.79□□□□□ -0.04
RAB3IP-216ENST00000552199 RARGP13631 454 aa14.79□□□□□ -0.04
RAB3IP-216ENST00000552199 KRT10P13645 584 aa14.79□□□□□ -0.04
RAB3IP-216ENST00000552199 ATP1A2P50993 1020 aa14.79□□□□□ -0.04
RAB3IP-216ENST00000552199 ZNF157P51786 506 aaPredicted RBP14.79□□□□□ -0.04
RAB3IP-216ENST00000552199 GNGT1P63211 74 aa14.79□□□□□ -0.04
RAB3IP-216ENST00000552199 HIC1Q14526 733 aa14.79□□□□□ -0.04
RAB3IP-216ENST00000552199 ZBTB6Q15916 424 aa14.79□□□□□ -0.04
RAB3IP-216ENST00000552199 CCL14Q16627 93 aa14.79□□□□□ -0.04
RAB3IP-216ENST00000552199 KRT71Q3SY84 523 aa14.79□□□□□ -0.04
RAB3IP-216ENST00000552199 DENND2CQ68D51 928 aa14.79□□□□□ -0.04
RAB3IP-216ENST00000552199 TXNRD3NBQ6F5E7 133 aa14.79□□□□□ -0.04
RAB3IP-216ENST00000552199 RHBDF2Q6PJF5 856 aa14.79□□□□□ -0.04
RAB3IP-216ENST00000552199 MCRS1Q96EZ8 462 aa14.79□□□□□ -0.04
RAB3IP-216ENST00000552199 ZMAT2Q96NC0 199 aaKnown RBP14.79□□□□□ -0.04
RAB3IP-216ENST00000552199 SEMA4AQ9H3S1 761 aa14.79□□□□□ -0.04
RAB3IP-216ENST00000552199 TJP3O95049 919 aa14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 ITGBL1O95965 494 aaPredicted RBP14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 IVLP07476 585 aa14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 YARSP54577 528 aaKnown RBP14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 ADCY2Q08462 1091 aa14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 TRIP13Q15645 432 aaPredicted RBP14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 ODF2Q5BJF6 829 aa14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 KAZNQ674X7 775 aa14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 C17orf99Q6UX52 265 aa14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 POLNQ7Z5Q5 900 aa14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 DNAJB3Q8WWF6 145 aa14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 RAPGEF5Q92565 580 aa14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 FAM118BQ9BPY3 351 aa14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 NT5C1AQ9BXI3 368 aa14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 CALCOCO1Q9P1Z2 691 aa14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 BCCIPQ9P287 314 aaKnown RBP eCLIP14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 GRIN2DO15399 1336 aa14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 SCN1AP35498 2009 aa14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 SHBGP04278 402 aa14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 ATF2P15336 505 aa14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 ATF7P17544 494 aaPredicted RBP14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 CYP3A5P20815 502 aa14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 AXLP30530 894 aa14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 CPT1AP50416 773 aa14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 CAV1Q03135 178 aa14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 LMNB2Q03252 620 aa14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 PDCLQ13371 301 aa14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 SLC29A2Q14542 456 aa14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 LCLAT1Q6UWP7 414 aa14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 ALKAL1Q6UXT8 129 aa14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 ARFGAP1Q8N6T3 406 aa14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 BEST2Q8NFU1 509 aa14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 UBA3Q8TBC4 463 aa14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 AP5M1Q9H0R1 490 aa14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 LRRC4CQ9HCJ2 640 aa14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 METTL5Q9NRN9 209 aaKnown RBP14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 Q9Y3F1 56 aa14.78□□□□□ -0.04
RAB3IP-216ENST00000552199 TRIP12Q14669 1992 aaPredicted RBP14.77□□□□□ -0.04
RAB3IP-216ENST00000552199 hCG_1818297A0A087WSY0 165 aa14.77□□□□□ -0.04
RAB3IP-216ENST00000552199 PPEF2O14830 753 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms