RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 NFE2Q16621 373 aaPredicted RBP18.54■□□□□ 0.56
CDK4-208ENST00000551706 DPCR1Q3MIW9 517 aa18.54■□□□□ 0.56
CDK4-208ENST00000551706 SLC39A12Q504Y0 691 aa18.54■□□□□ 0.56
CDK4-208ENST00000551706 ASTLQ6HA08 431 aaPredicted RBP18.54■□□□□ 0.56
CDK4-208ENST00000551706 SRRTQ9BXP5 876 aaKnown RBP18.54■□□□□ 0.56
CDK4-208ENST00000551706 MMRN2Q9H8L6 949 aa18.54■□□□□ 0.56
CDK4-208ENST00000551706 NR2E1Q9Y466 385 aa18.54■□□□□ 0.56
CDK4-208ENST00000551706 MTMR11A4FU01 709 aa18.53■□□□□ 0.56
CDK4-208ENST00000551706 WEE2P0C1S8 567 aa18.53■□□□□ 0.56
CDK4-208ENST00000551706 CCDC192P0DO97 292 aa18.53■□□□□ 0.56
CDK4-208ENST00000551706 MARSP56192 900 aaKnown RBP18.53■□□□□ 0.56
CDK4-208ENST00000551706 PLD1Q13393 1074 aa18.53■□□□□ 0.56
CDK4-208ENST00000551706 INTS6LQ5JSJ4 861 aaKnown RBP18.53■□□□□ 0.56
CDK4-208ENST00000551706 OSTM1Q86WC4 334 aa18.53■□□□□ 0.56
CDK4-208ENST00000551706 FBXL13Q8NEE6 735 aa18.53■□□□□ 0.56
CDK4-208ENST00000551706 SPPL2BQ8TCT7 592 aa18.53■□□□□ 0.56
CDK4-208ENST00000551706 TAS1R2Q8TE23 839 aa18.53■□□□□ 0.56
CDK4-208ENST00000551706 KBTBD7Q8WVZ9 684 aa18.53■□□□□ 0.56
CDK4-208ENST00000551706 SLC35C1Q96A29 364 aa18.53■□□□□ 0.56
CDK4-208ENST00000551706 PGLYRP2Q96PD5 576 aa18.53■□□□□ 0.56
CDK4-208ENST00000551706 TMEM209Q96SK2 561 aa18.53■□□□□ 0.56
CDK4-208ENST00000551706 SNX25Q9H3E2 840 aa18.53■□□□□ 0.56
CDK4-208ENST00000551706 POMKQ9H5K3 350 aa18.53■□□□□ 0.56
CDK4-208ENST00000551706 WDR6Q9NNW5 1121 aaKnown RBP18.53■□□□□ 0.56
CDK4-208ENST00000551706 CDH9Q9ULB4 789 aa18.53■□□□□ 0.56
CDK4-208ENST00000551706 INSL5Q9Y5Q6 135 aa18.53■□□□□ 0.56
CDK4-208ENST00000551706 EPG5Q9HCE0 2579 aa18.53■□□□□ 0.56
CDK4-208ENST00000551706 TSC2P49815 1807 aa18.53■□□□□ 0.56
CDK4-208ENST00000551706 CCL16O15467 120 aa18.52■□□□□ 0.56
CDK4-208ENST00000551706 N4BP1O75113 896 aaKnown RBP18.52■□□□□ 0.56
CDK4-208ENST00000551706 SEC24AO95486 1093 aa18.52■□□□□ 0.56
CDK4-208ENST00000551706 GNL1P36915 607 aaPredicted RBP18.52■□□□□ 0.56
CDK4-208ENST00000551706 TUFMP49411 452 aaKnown RBP18.52■□□□□ 0.56
CDK4-208ENST00000551706 DUSP4Q13115 394 aa18.52■□□□□ 0.56
CDK4-208ENST00000551706 MAPRE1Q15691 268 aaKnown RBP18.52■□□□□ 0.56
CDK4-208ENST00000551706 TPD52L1Q16890 204 aaPredicted RBP18.52■□□□□ 0.56
CDK4-208ENST00000551706 SASS6Q6UVJ0 657 aa18.52■□□□□ 0.56
CDK4-208ENST00000551706 DGLUCYQ7Z3D6 616 aa18.52■□□□□ 0.56
CDK4-208ENST00000551706 ELMOD1Q8N336 334 aa18.52■□□□□ 0.56
CDK4-208ENST00000551706 FAXDC2Q96IV6 333 aa18.52■□□□□ 0.56
CDK4-208ENST00000551706 MFSD1Q9H3U5 465 aa18.52■□□□□ 0.56
CDK4-208ENST00000551706 RAB20Q9NX57 234 aa18.52■□□□□ 0.56
CDK4-208ENST00000551706 CDH22Q9UJ99 828 aa18.52■□□□□ 0.56
CDK4-208ENST00000551706 POLIQ9UNA4 740 aa18.52■□□□□ 0.56
CDK4-208ENST00000551706 USTQ9Y2C2 406 aa18.52■□□□□ 0.56
CDK4-208ENST00000551706 PCDHB5Q9Y5E4 795 aa18.52■□□□□ 0.56
CDK4-208ENST00000551706 PMM2O15305 246 aa18.51■□□□□ 0.55
CDK4-208ENST00000551706 KRT37O76014 449 aa18.51■□□□□ 0.55
CDK4-208ENST00000551706 ALDH1A3P47895 512 aa18.51■□□□□ 0.55
CDK4-208ENST00000551706 CLCN5P51795 746 aa18.51■□□□□ 0.55
CDK4-208ENST00000551706 NOP14P78316 857 aaKnown RBP18.51■□□□□ 0.55
CDK4-208ENST00000551706 CETN1Q12798 172 aa18.51■□□□□ 0.55
CDK4-208ENST00000551706 LRRTM3Q86VH5 581 aa18.51■□□□□ 0.55
CDK4-208ENST00000551706 TRIM59Q8IWR1 403 aa18.51■□□□□ 0.55
CDK4-208ENST00000551706 ATAD1Q8NBU5 361 aa18.51■□□□□ 0.55
CDK4-208ENST00000551706 OR6B3Q8NGW1 331 aa18.51■□□□□ 0.55
CDK4-208ENST00000551706 RMDN1Q96DB5 314 aa18.51■□□□□ 0.55
CDK4-208ENST00000551706 SYT15Q9BQS2 421 aa18.51■□□□□ 0.55
CDK4-208ENST00000551706 MRPL45Q9BRJ2 306 aaKnown RBP18.51■□□□□ 0.55
CDK4-208ENST00000551706 ABCB6Q9NP58 842 aa18.51■□□□□ 0.55
CDK4-208ENST00000551706 COQ4Q9Y3A0 265 aa18.51■□□□□ 0.55
CDK4-208ENST00000551706 YIPF1Q9Y548 306 aa18.51■□□□□ 0.55
CDK4-208ENST00000551706 MTCL1Q9Y4B5 1905 aaKnown RBP18.51■□□□□ 0.55
CDK4-208ENST00000551706 CLUHO75153 1309 aa18.5■□□□□ 0.55
CDK4-208ENST00000551706 VNN2O95498 520 aa18.5■□□□□ 0.55
CDK4-208ENST00000551706 ACAT1P24752 427 aaKnown RBP18.5■□□□□ 0.55
CDK4-208ENST00000551706 LMO2P25791 158 aa18.5■□□□□ 0.55
CDK4-208ENST00000551706 TWF1Q12792 350 aa18.5■□□□□ 0.55
CDK4-208ENST00000551706 CBWD6Q4V339 395 aa18.5■□□□□ 0.55
CDK4-208ENST00000551706 WDR44Q5JSH3 913 aa18.5■□□□□ 0.55
CDK4-208ENST00000551706 CBWD3Q5JTY5 395 aa18.5■□□□□ 0.55
CDK4-208ENST00000551706 CBWD5Q5RIA9 395 aa18.5■□□□□ 0.55
CDK4-208ENST00000551706 IQCEQ6IPM2 695 aa18.5■□□□□ 0.55
CDK4-208ENST00000551706 OTOP3Q7RTS5 596 aa18.5■□□□□ 0.55
CDK4-208ENST00000551706 GRASPQ7Z6J2 395 aaPredicted RBP18.5■□□□□ 0.55
CDK4-208ENST00000551706 MED15Q96RN5 788 aa18.5■□□□□ 0.55
CDK4-208ENST00000551706 PI4K2AQ9BTU6 479 aa18.5■□□□□ 0.55
CDK4-208ENST00000551706 NIF3L1Q9GZT8 377 aa18.5■□□□□ 0.55
CDK4-208ENST00000551706 SMYD3Q9H7B4 428 aa18.5■□□□□ 0.55
CDK4-208ENST00000551706 CYP3A43Q9HB55 503 aa18.5■□□□□ 0.55
CDK4-208ENST00000551706 ANO10Q9NW15 660 aa18.5■□□□□ 0.55
CDK4-208ENST00000551706 ABI2Q9NYB9 513 aaPredicted RBP18.5■□□□□ 0.55
CDK4-208ENST00000551706 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.5■□□□□ 0.55
CDK4-208ENST00000551706 EP300Q09472 2414 aaPredicted RBP18.5■□□□□ 0.55
CDK4-208ENST00000551706 NCOR2Q9Y618 2525 aa18.49■□□□□ 0.55
CDK4-208ENST00000551706 KMT2BQ9UMN6 2715 aaPredicted RBP18.49■□□□□ 0.55
CDK4-208ENST00000551706 A8MXQ7 604 aa18.49■□□□□ 0.55
CDK4-208ENST00000551706 P4HA2O15460 535 aa18.49■□□□□ 0.55
CDK4-208ENST00000551706 PTPN2P17706 415 aa18.49■□□□□ 0.55
CDK4-208ENST00000551706 TRIM21P19474 475 aaKnown RBP18.49■□□□□ 0.55
CDK4-208ENST00000551706 FMO5P49326 533 aa18.49■□□□□ 0.55
CDK4-208ENST00000551706 EPHB3P54753 998 aa18.49■□□□□ 0.55
CDK4-208ENST00000551706 STX1AQ16623 288 aa18.49■□□□□ 0.55
CDK4-208ENST00000551706 MGAT5BQ3V5L5 792 aa18.49■□□□□ 0.55
CDK4-208ENST00000551706 SPOPLQ6IQ16 392 aa18.49■□□□□ 0.55
CDK4-208ENST00000551706 FAM171BQ6P995 826 aa18.49■□□□□ 0.55
CDK4-208ENST00000551706 SCARA5Q6ZMJ2 495 aa18.49■□□□□ 0.55
CDK4-208ENST00000551706 C4orf50Q6ZRC1 276 aa18.49■□□□□ 0.55
CDK4-208ENST00000551706 SPATA2LQ8IUW3 424 aaPredicted RBP18.49■□□□□ 0.55
CDK4-208ENST00000551706 FAM114A1Q8IWE2 563 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms