RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 ZNF571Q7Z3V5 609 aaPredicted RBP10.94□□□□□ -0.66
RAB5C-207ENST00000550504 TMEM139Q8IV31 216 aa10.94□□□□□ -0.66
RAB5C-207ENST00000550504 PASD1Q8IV76 773 aa10.94□□□□□ -0.66
RAB5C-207ENST00000550504 GLYCTKQ8IVS8 523 aa10.94□□□□□ -0.66
RAB5C-207ENST00000550504 CRYBG2Q8N1P7 616 aa10.94□□□□□ -0.66
RAB5C-207ENST00000550504 B3GALNT2Q8NCR0 500 aa10.94□□□□□ -0.66
RAB5C-207ENST00000550504 FBXO22Q8NEZ5 403 aa10.94□□□□□ -0.66
RAB5C-207ENST00000550504 LNX1Q8TBB1 728 aaPredicted RBP10.94□□□□□ -0.66
RAB5C-207ENST00000550504 SPATA18Q8TC71 538 aa10.94□□□□□ -0.66
RAB5C-207ENST00000550504 TNIP3Q96KP6 325 aa10.94□□□□□ -0.66
RAB5C-207ENST00000550504 AGPAT1Q99943 283 aa10.94□□□□□ -0.66
RAB5C-207ENST00000550504 ACBD6Q9BR61 282 aa10.94□□□□□ -0.66
RAB5C-207ENST00000550504 MED10Q9BTT4 135 aa10.94□□□□□ -0.66
RAB5C-207ENST00000550504 PLVAPQ9BX97 442 aa10.94□□□□□ -0.66
RAB5C-207ENST00000550504 PDCL3Q9H2J4 239 aa10.94□□□□□ -0.66
RAB5C-207ENST00000550504 NHEJ1Q9H9Q4 299 aaPredicted RBP10.94□□□□□ -0.66
RAB5C-207ENST00000550504 SLC28A3Q9HAS3 691 aa10.94□□□□□ -0.66
RAB5C-207ENST00000550504 CHST7Q9NS84 486 aa10.94□□□□□ -0.66
RAB5C-207ENST00000550504 NOCTQ9UK39 431 aaKnown RBP10.94□□□□□ -0.66
RAB5C-207ENST00000550504 GTF3C4Q9UKN8 822 aa10.94□□□□□ -0.66
RAB5C-207ENST00000550504 BZW2Q9Y6E2 419 aaKnown RBP10.94□□□□□ -0.66
RAB5C-207ENST00000550504 A0A1W2PPC1 479 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 C5orf67F2Z3F1 127 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 GRM6O15303 877 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 MED7O43513 233 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 CFHP08603 1231 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 CHRNB2P17787 502 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 FECHP22830 423 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 ERVK-21P61565 698 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 CCZ1BP86790 482 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 CCZ1P86791 482 aaPredicted RBP10.93□□□□□ -0.66
RAB5C-207ENST00000550504 CDK17Q00537 523 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 TSPY1Q01534 308 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 CDR2Q01850 454 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 CYP27A1Q02318 531 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 DSG1Q02413 1049 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 MTF1Q14872 753 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 GOLGA7BQ2TAP0 167 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 SLC39A12Q504Y0 691 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 INTS6LQ5JSJ4 861 aaKnown RBP10.93□□□□□ -0.66
RAB5C-207ENST00000550504 PPP1R26Q5T8A7 1209 aaPredicted RBP10.93□□□□□ -0.66
RAB5C-207ENST00000550504 RSPO2Q6UXX9 243 aaPredicted RBP10.93□□□□□ -0.66
RAB5C-207ENST00000550504 TMC7Q7Z402 723 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 LRRTM3Q86VH5 581 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 TMTC1Q8IUR5 882 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 CCDC112Q8NEF3 446 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 SPPL3Q8TCT6 385 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 POF1BQ8WVV4 589 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 ZNF606Q8WXB4 792 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 ARNTL2Q8WYA1 636 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 PIK3R5Q8WYR1 880 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 DDX1Q92499 740 aaKnown RBP10.93□□□□□ -0.66
RAB5C-207ENST00000550504 TIFAQ96CG3 184 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 CCDC42Q96M95 316 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 SAMD11Q96NU1 681 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 C11orf84Q9BUA3 381 aaPredicted RBP10.93□□□□□ -0.66
RAB5C-207ENST00000550504 ZBP1Q9H171 429 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 KCNF1Q9H3M0 494 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 DEF6Q9H4E7 631 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 SPTLC3Q9NUV7 552 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 TMLHEQ9NVH6 421 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 MTRRQ9UBK8 725 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 CDY1Q9Y6F8 540 aa10.93□□□□□ -0.66
RAB5C-207ENST00000550504 SPTBN5Q9NRC6 3674 aaKnown RBP10.93□□□□□ -0.66
RAB5C-207ENST00000550504 SSU72P8A0A1W2PR75 194 aa10.92□□□□□ -0.66
RAB5C-207ENST00000550504 OR6C75A6NL08 312 aa10.92□□□□□ -0.66
RAB5C-207ENST00000550504 O00370 1275 aa10.92□□□□□ -0.66
RAB5C-207ENST00000550504 CLDN5O00501 218 aa10.92□□□□□ -0.66
RAB5C-207ENST00000550504 SOX1O00570 391 aaPredicted RBP10.92□□□□□ -0.66
RAB5C-207ENST00000550504 DDX3XO00571 662 aaKnown RBP eCLIP10.92□□□□□ -0.661e-18■■■□□ 16.5
RAB5C-207ENST00000550504 ADAM12O43184 909 aa10.92□□□□□ -0.66
RAB5C-207ENST00000550504 NRDCO43847 1150 aa10.92□□□□□ -0.66
RAB5C-207ENST00000550504 AKR1B10O60218 316 aa10.92□□□□□ -0.66
RAB5C-207ENST00000550504 MICAL2O94851 1124 aa10.92□□□□□ -0.66
RAB5C-207ENST00000550504 CXCL14O95715 111 aa10.92□□□□□ -0.66
RAB5C-207ENST00000550504 RB1P06400 928 aa10.92□□□□□ -0.66
RAB5C-207ENST00000550504 CPB1P15086 417 aa10.92□□□□□ -0.66
RAB5C-207ENST00000550504 DNAJB1P25685 340 aa10.92□□□□□ -0.66
RAB5C-207ENST00000550504 OR1D2P34982 312 aa10.92□□□□□ -0.66
RAB5C-207ENST00000550504 KIF11P52732 1056 aa10.92□□□□□ -0.66
RAB5C-207ENST00000550504 ERVFC1P60507 584 aa10.92□□□□□ -0.66
RAB5C-207ENST00000550504 SMAD3P84022 425 aaKnown RBP10.92□□□□□ -0.66
RAB5C-207ENST00000550504 FMO1Q01740 532 aa10.92□□□□□ -0.66
RAB5C-207ENST00000550504 MAPK8IP2Q13387 824 aaPredicted RBP10.92□□□□□ -0.66
RAB5C-207ENST00000550504 GPM6BQ13491 265 aa10.92□□□□□ -0.66
RAB5C-207ENST00000550504 PLPP4Q5VZY2 271 aa10.92□□□□□ -0.66
RAB5C-207ENST00000550504 ARHGAP17Q68EM7 881 aa10.92□□□□□ -0.66
RAB5C-207ENST00000550504 SMYD5Q6GMV2 418 aa10.92□□□□□ -0.66
RAB5C-207ENST00000550504 DENND1BQ6P3S1 775 aa10.92□□□□□ -0.66
RAB5C-207ENST00000550504 RAD9BQ6WBX8 426 aa10.92□□□□□ -0.66
RAB5C-207ENST00000550504 VPS36Q86VN1 386 aa10.92□□□□□ -0.66
RAB5C-207ENST00000550504 ZNF677Q86XU0 584 aa10.92□□□□□ -0.66
RAB5C-207ENST00000550504 DCP1BQ8IZD4 617 aaKnown RBP10.92□□□□□ -0.66
RAB5C-207ENST00000550504 OLIG1Q8TAK6 271 aa10.92□□□□□ -0.66
RAB5C-207ENST00000550504 MYCBPAPQ8TBZ2 947 aa10.92□□□□□ -0.66
RAB5C-207ENST00000550504 SLC2A14Q8TDB8 520 aa10.92□□□□□ -0.66
RAB5C-207ENST00000550504 MICAL1Q8TDZ2 1067 aa10.92□□□□□ -0.66
RAB5C-207ENST00000550504 MYLPFQ96A32 169 aa10.92□□□□□ -0.66
RAB5C-207ENST00000550504 CYFIP2Q96F07 1278 aa10.92□□□□□ -0.66
RAB5C-207ENST00000550504 PCED1BQ96HM7 432 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms