RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 PRRC2BQ5JSZ5 2229 aaKnown RBP22.47■■□□□ 1.19
CACNB3-210ENST00000548874 VNN2O95498 520 aa22.46■■□□□ 1.19
CACNB3-210ENST00000548874 JAM2P57087 298 aa22.46■■□□□ 1.19
CACNB3-210ENST00000548874 HYAL1Q12794 435 aa22.46■■□□□ 1.19
CACNB3-210ENST00000548874 SMARCB1Q12824 385 aa22.46■■□□□ 1.19
CACNB3-210ENST00000548874 ORC1Q13415 861 aa22.46■■□□□ 1.19
CACNB3-210ENST00000548874 RAPGEF1Q13905 1077 aa22.46■■□□□ 1.19
CACNB3-210ENST00000548874 KCNC3Q14003 757 aa22.46■■□□□ 1.19
CACNB3-210ENST00000548874 SLC39A12Q504Y0 691 aa22.46■■□□□ 1.19
CACNB3-210ENST00000548874 ZNF394Q53GI3 561 aa22.46■■□□□ 1.19
CACNB3-210ENST00000548874 RNF19BQ6ZMZ0 732 aa22.46■■□□□ 1.19
CACNB3-210ENST00000548874 ACOT1Q86TX2 421 aa22.46■■□□□ 1.19
CACNB3-210ENST00000548874 PALB2Q86YC2 1186 aa22.46■■□□□ 1.19
CACNB3-210ENST00000548874 RBBP8NLQ8NC74 664 aaPredicted RBP22.46■■□□□ 1.19
CACNB3-210ENST00000548874 MYCBPAPQ8TBZ2 947 aa22.46■■□□□ 1.19
CACNB3-210ENST00000548874 TMEM176AQ96HP8 235 aa22.46■■□□□ 1.19
CACNB3-210ENST00000548874 AFF4Q9UHB7 1163 aaKnown RBP22.46■■□□□ 1.19
CACNB3-210ENST00000548874 GTF3C4Q9UKN8 822 aa22.46■■□□□ 1.19
CACNB3-210ENST00000548874 RNF225M0QZC1 329 aaPredicted RBP22.45■■□□□ 1.18
CACNB3-210ENST00000548874 FOXN3O00409 490 aaPredicted RBP22.45■■□□□ 1.18
CACNB3-210ENST00000548874 TGM5O43548 720 aa22.45■■□□□ 1.18
CACNB3-210ENST00000548874 GLUD1P00367 558 aa22.45■■□□□ 1.18
CACNB3-210ENST00000548874 TRIM21P19474 475 aaKnown RBP22.45■■□□□ 1.18
CACNB3-210ENST00000548874 ZNF75DP51815 510 aa22.45■■□□□ 1.18
CACNB3-210ENST00000548874 MAPRE1Q15691 268 aaKnown RBP22.45■■□□□ 1.18
CACNB3-210ENST00000548874 NFE2Q16621 373 aaPredicted RBP22.45■■□□□ 1.18
CACNB3-210ENST00000548874 VSTM4Q8IW00 320 aa22.45■■□□□ 1.18
CACNB3-210ENST00000548874 FAM71AQ8IYT1 594 aa22.45■■□□□ 1.18
CACNB3-210ENST00000548874 LPIN3Q9BQK8 851 aa22.45■■□□□ 1.18
CACNB3-210ENST00000548874 NUP58Q9BVL2 599 aa22.45■■□□□ 1.18
CACNB3-210ENST00000548874 NLRC4Q9NPP4 1024 aa22.45■■□□□ 1.18
CACNB3-210ENST00000548874 FBXW11Q9UKB1 542 aa22.45■■□□□ 1.18
CACNB3-210ENST00000548874 MAFFQ9ULX9 164 aa22.45■■□□□ 1.18
CACNB3-210ENST00000548874 PLXNA3P51805 1871 aa22.45■■□□□ 1.18
CACNB3-210ENST00000548874 MTMR11A4FU01 709 aa22.44■■□□□ 1.18
CACNB3-210ENST00000548874 F8VZ95 297 aa22.44■■□□□ 1.18
CACNB3-210ENST00000548874 PAEPP09466 180 aa22.44■■□□□ 1.18
CACNB3-210ENST00000548874 ATF2P15336 505 aa22.44■■□□□ 1.18
CACNB3-210ENST00000548874 GTF2F1P35269 517 aaKnown RBP eCLIP22.44■■□□□ 1.18
CACNB3-210ENST00000548874 MDH1BQ5I0G3 518 aa22.44■■□□□ 1.18
CACNB3-210ENST00000548874 C2orf15Q8WU43 125 aaKnown RBP22.44■■□□□ 1.18
CACNB3-210ENST00000548874 PCED1BQ96HM7 432 aa22.44■■□□□ 1.18
CACNB3-210ENST00000548874 MRFAP1L1Q96HT8 127 aa22.44■■□□□ 1.18
CACNB3-210ENST00000548874 EDEM3Q9BZQ6 932 aa22.44■■□□□ 1.18
CACNB3-210ENST00000548874 DNAI2Q9GZS0 605 aa22.44■■□□□ 1.18
CACNB3-210ENST00000548874 HCFC2Q9Y5Z7 792 aa22.44■■□□□ 1.18
CACNB3-210ENST00000548874 PNMA6AP0CW24 399 aaPredicted RBP22.43■■□□□ 1.18
CACNB3-210ENST00000548874 KRT5P13647 590 aa22.43■■□□□ 1.18
CACNB3-210ENST00000548874 FOSL2P15408 326 aa22.43■■□□□ 1.18
CACNB3-210ENST00000548874 EPCAMP16422 314 aa22.43■■□□□ 1.18
CACNB3-210ENST00000548874 COL19A1Q14993 1142 aa22.43■■□□□ 1.18
CACNB3-210ENST00000548874 SPECC1LQ69YQ0 1117 aa22.43■■□□□ 1.18
CACNB3-210ENST00000548874 EFHBQ8N7U6 833 aa22.43■■□□□ 1.18
CACNB3-210ENST00000548874 C12orf29Q8N999 325 aa22.43■■□□□ 1.18
CACNB3-210ENST00000548874 ATAD1Q8NBU5 361 aa22.43■■□□□ 1.18
CACNB3-210ENST00000548874 VN1R2Q8NFZ6 395 aa22.43■■□□□ 1.18
CACNB3-210ENST00000548874 BAP1Q92560 729 aa22.43■■□□□ 1.18
CACNB3-210ENST00000548874 MYLPFQ96A32 169 aa22.43■■□□□ 1.18
CACNB3-210ENST00000548874 IQCDQ96DY2 449 aa22.43■■□□□ 1.18
CACNB3-210ENST00000548874 PGLYRP2Q96PD5 576 aa22.43■■□□□ 1.18
CACNB3-210ENST00000548874 ABCB6Q9NP58 842 aa22.43■■□□□ 1.18
CACNB3-210ENST00000548874 HSFX1Q9UBD0 423 aa22.43■■□□□ 1.18
CACNB3-210ENST00000548874 A0A1W2PQJ5 194 aa22.42■■□□□ 1.18
CACNB3-210ENST00000548874 GOLGA6L3A6NEY3 463 aa22.42■■□□□ 1.18
CACNB3-210ENST00000548874 ADCY1Q08828 1119 aa22.42■■□□□ 1.18
CACNB3-210ENST00000548874 CFAP221Q4G0U5 840 aa22.42■■□□□ 1.18
CACNB3-210ENST00000548874 TMEM184AQ6ZMB5 413 aa22.42■■□□□ 1.18
CACNB3-210ENST00000548874 C4orf50Q6ZRC1 276 aa22.42■■□□□ 1.18
CACNB3-210ENST00000548874 TCEAL8Q8IYN2 117 aa22.42■■□□□ 1.18
CACNB3-210ENST00000548874 KREMEN2Q8NCW0 462 aa22.42■■□□□ 1.18
CACNB3-210ENST00000548874 SPPL2BQ8TCT7 592 aa22.42■■□□□ 1.18
CACNB3-210ENST00000548874 HDAC7Q8WUI4 952 aa22.42■■□□□ 1.18
CACNB3-210ENST00000548874 FUBP3Q96I24 572 aaKnown RBP eCLIP22.42■■□□□ 1.18
CACNB3-210ENST00000548874 HEXIM2Q96MH2 286 aaKnown RBP22.42■■□□□ 1.18
CACNB3-210ENST00000548874 SPAG5Q96R06 1193 aa22.42■■□□□ 1.18
CACNB3-210ENST00000548874 B3GNT5Q9BYG0 378 aa22.42■■□□□ 1.18
CACNB3-210ENST00000548874 CRISPLD1Q9H336 500 aa22.42■■□□□ 1.18
CACNB3-210ENST00000548874 KIAA1257Q9ULG3 409 aa22.42■■□□□ 1.18
CACNB3-210ENST00000548874 MYO6Q9UM54 1294 aa22.42■■□□□ 1.18
CACNB3-210ENST00000548874 PCDHB5Q9Y5E4 795 aa22.42■■□□□ 1.18
CACNB3-210ENST00000548874 SZT2Q5T011 3432 aa22.41■■□□□ 1.18
CACNB3-210ENST00000548874 CYP26A1O43174 497 aa22.41■■□□□ 1.18
CACNB3-210ENST00000548874 SEC24AO95486 1093 aa22.41■■□□□ 1.18
CACNB3-210ENST00000548874 VDRP11473 427 aa22.41■■□□□ 1.18
CACNB3-210ENST00000548874 CLCN1P35523 988 aa22.41■■□□□ 1.18
CACNB3-210ENST00000548874 SOX5P35711 763 aa22.41■■□□□ 1.18
CACNB3-210ENST00000548874 RBM10P98175 930 aaKnown RBP22.41■■□□□ 1.18
CACNB3-210ENST00000548874 ARHGAP17Q68EM7 881 aa22.41■■□□□ 1.18
CACNB3-210ENST00000548874 PAQR9Q6ZVX9 377 aa22.41■■□□□ 1.18
CACNB3-210ENST00000548874 CACNA2D4Q7Z3S7 1137 aa22.41■■□□□ 1.18
CACNB3-210ENST00000548874 SPATA2LQ8IUW3 424 aaPredicted RBP22.41■■□□□ 1.18
CACNB3-210ENST00000548874 FUKQ8N0W3 1084 aa22.41■■□□□ 1.18
CACNB3-210ENST00000548874 HNRNPABQ99729 332 aaKnown RBP22.41■■□□□ 1.18
CACNB3-210ENST00000548874 PLEKHA4Q9H4M7 779 aa22.41■■□□□ 1.18
CACNB3-210ENST00000548874 IGFLR1Q9H665 355 aa22.41■■□□□ 1.18
CACNB3-210ENST00000548874 GRPEL1Q9HAV7 217 aa22.41■■□□□ 1.18
CACNB3-210ENST00000548874 FAM49BQ9NUQ9 324 aa22.41■■□□□ 1.18
CACNB3-210ENST00000548874 ABI2Q9NYB9 513 aaPredicted RBP22.41■■□□□ 1.18
CACNB3-210ENST00000548874 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.41■■□□□ 1.18
CACNB3-210ENST00000548874 GLP2RO95838 553 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms