RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 EHBP1Q8NDI1 1231 aa17.94■□□□□ 0.46
CCDC38-203ENST00000546803 MYCBPAPQ8TBZ2 947 aa17.94■□□□□ 0.46
CCDC38-203ENST00000546803 TATDN2Q93075 761 aa17.94■□□□□ 0.46
CCDC38-203ENST00000546803 NT5C1BQ96P26 610 aa17.94■□□□□ 0.46
CCDC38-203ENST00000546803 TUBGCP2Q9BSJ2 902 aa17.94■□□□□ 0.46
CCDC38-203ENST00000546803 PHF7Q9BWX1 381 aaPredicted RBP17.94■□□□□ 0.46
CCDC38-203ENST00000546803 TMLHEQ9NVH6 421 aa17.94■□□□□ 0.46
CCDC38-203ENST00000546803 ABI2Q9NYB9 513 aaPredicted RBP17.94■□□□□ 0.46
CCDC38-203ENST00000546803 YIPF1Q9Y548 306 aa17.94■□□□□ 0.46
CCDC38-203ENST00000546803 NME7Q9Y5B8 376 aa17.94■□□□□ 0.46
CCDC38-203ENST00000546803 GTPBP10A4D1E9 387 aaKnown RBP17.93■□□□□ 0.46
CCDC38-203ENST00000546803 CCL16O15467 120 aa17.93■□□□□ 0.46
CCDC38-203ENST00000546803 ATP2C2O75185 946 aa17.93■□□□□ 0.46
CCDC38-203ENST00000546803 TBXAS1P24557 533 aaPredicted RBP17.93■□□□□ 0.46
CCDC38-203ENST00000546803 PSMC1P62191 440 aaKnown RBP17.93■□□□□ 0.46
CCDC38-203ENST00000546803 YWHAEP62258 255 aaKnown RBP17.93■□□□□ 0.46
CCDC38-203ENST00000546803 TWF1Q12792 350 aa17.93■□□□□ 0.46
CCDC38-203ENST00000546803 ZSCAN23Q3MJ62 389 aa17.93■□□□□ 0.46
CCDC38-203ENST00000546803 MGAT5BQ3V5L5 792 aa17.93■□□□□ 0.46
CCDC38-203ENST00000546803 VWA3BQ502W6 1294 aa17.93■□□□□ 0.46
CCDC38-203ENST00000546803 CDKAL1Q5VV42 579 aa17.93■□□□□ 0.46
CCDC38-203ENST00000546803 B3GALNT2Q8NCR0 500 aa17.93■□□□□ 0.46
CCDC38-203ENST00000546803 LMO3Q8TAP4 145 aa17.93■□□□□ 0.46
CCDC38-203ENST00000546803 CRISPLD1Q9H336 500 aa17.93■□□□□ 0.46
CCDC38-203ENST00000546803 WDR6Q9NNW5 1121 aaKnown RBP17.93■□□□□ 0.46
CCDC38-203ENST00000546803 CRTAC1Q9NQ79 661 aa17.93■□□□□ 0.46
CCDC38-203ENST00000546803 FANCLQ9NW38 375 aa17.93■□□□□ 0.46
CCDC38-203ENST00000546803 SLC27A5Q9Y2P5 690 aa17.93■□□□□ 0.46
CCDC38-203ENST00000546803 SMTNL1A8MU46 457 aa17.92■□□□□ 0.46
CCDC38-203ENST00000546803 CAVIN2O95810 425 aa17.92■□□□□ 0.46
CCDC38-203ENST00000546803 HAPLN1P10915 354 aaPredicted RBP17.92■□□□□ 0.46
CCDC38-203ENST00000546803 ZNF165P49910 485 aa17.92■□□□□ 0.46
CCDC38-203ENST00000546803 NDST1P52848 882 aa17.92■□□□□ 0.46
CCDC38-203ENST00000546803 EPHB3P54753 998 aa17.92■□□□□ 0.46
CCDC38-203ENST00000546803 CUL2Q13617 745 aa17.92■□□□□ 0.46
CCDC38-203ENST00000546803 HSP90AA4PQ58FG1 418 aa17.92■□□□□ 0.46
CCDC38-203ENST00000546803 IQCEQ6IPM2 695 aa17.92■□□□□ 0.46
CCDC38-203ENST00000546803 GBP6Q6ZN66 633 aa17.92■□□□□ 0.46
CCDC38-203ENST00000546803 ADHFE1Q8IWW8 467 aa17.92■□□□□ 0.46
CCDC38-203ENST00000546803 CRYBG2Q8N1P7 616 aa17.92■□□□□ 0.46
CCDC38-203ENST00000546803 ANKRD20A12PQ8NF67 263 aa17.92■□□□□ 0.46
CCDC38-203ENST00000546803 ZNF512Q96ME7 567 aaPredicted RBP17.92■□□□□ 0.46
CCDC38-203ENST00000546803 SEPT5Q99719 369 aaPredicted RBP17.92■□□□□ 0.46
CCDC38-203ENST00000546803 NT5C1AQ9BXI3 368 aa17.92■□□□□ 0.46
CCDC38-203ENST00000546803 NDST4Q9H3R1 872 aa17.92■□□□□ 0.46
CCDC38-203ENST00000546803 DPEP3Q9H4B8 488 aa17.92■□□□□ 0.46
CCDC38-203ENST00000546803 POMKQ9H5K3 350 aa17.92■□□□□ 0.46
CCDC38-203ENST00000546803 CDH22Q9UJ99 828 aa17.92■□□□□ 0.46
CCDC38-203ENST00000546803 ASB3Q9Y575 518 aa17.92■□□□□ 0.46
CCDC38-203ENST00000546803 CILPO75339 1184 aa17.91■□□□□ 0.46
CCDC38-203ENST00000546803 TPM2P07951 284 aa17.91■□□□□ 0.46
CCDC38-203ENST00000546803 PTPN2P17706 415 aa17.91■□□□□ 0.46
CCDC38-203ENST00000546803 MAGEA11P43364 429 aa17.91■□□□□ 0.46
CCDC38-203ENST00000546803 RPL10AP62906 217 aaKnown RBP17.91■□□□□ 0.46
CCDC38-203ENST00000546803 VEPH1Q14D04 833 aa17.91■□□□□ 0.46
CCDC38-203ENST00000546803 NCAPHQ15003 741 aa17.91■□□□□ 0.46
CCDC38-203ENST00000546803 MDH1BQ5I0G3 518 aa17.91■□□□□ 0.46
CCDC38-203ENST00000546803 VSTM1Q6UX27 236 aa17.91■□□□□ 0.46
CCDC38-203ENST00000546803 GRASPQ7Z6J2 395 aaPredicted RBP17.91■□□□□ 0.46
CCDC38-203ENST00000546803 AOPEPQ8N6M6 819 aa17.91■□□□□ 0.46
CCDC38-203ENST00000546803 TTC9BQ8N6N2 239 aa17.91■□□□□ 0.46
CCDC38-203ENST00000546803 LEMD2Q8NC56 503 aa17.91■□□□□ 0.46
CCDC38-203ENST00000546803 MYLPFQ96A32 169 aa17.91■□□□□ 0.46
CCDC38-203ENST00000546803 PCED1BQ96HM7 432 aa17.91■□□□□ 0.46
CCDC38-203ENST00000546803 INTS2Q9H0H0 1204 aaKnown RBP17.91■□□□□ 0.46
CCDC38-203ENST00000546803 AVENQ9NQS1 362 aaPredicted RBP17.91■□□□□ 0.46
CCDC38-203ENST00000546803 CISHQ9NSE2 258 aa17.91■□□□□ 0.46
CCDC38-203ENST00000546803 GCNT4Q9P109 453 aa17.91■□□□□ 0.46
CCDC38-203ENST00000546803 USTQ9Y2C2 406 aa17.91■□□□□ 0.46
CCDC38-203ENST00000546803 CLUHO75153 1309 aa17.91■□□□□ 0.46
CCDC38-203ENST00000546803 CD58P19256 250 aa17.9■□□□□ 0.46
CCDC38-203ENST00000546803 CYP2F1P24903 491 aa17.9■□□□□ 0.46
CCDC38-203ENST00000546803 CYP27A1Q02318 531 aa17.9■□□□□ 0.46
CCDC38-203ENST00000546803 GCNT1Q02742 428 aa17.9■□□□□ 0.46
CCDC38-203ENST00000546803 LRMPQ12912 555 aa17.9■□□□□ 0.46
CCDC38-203ENST00000546803 EXOC3L4Q17RC7 722 aa17.9■□□□□ 0.46
CCDC38-203ENST00000546803 CCDC142Q17RM4 750 aa17.9■□□□□ 0.46
CCDC38-203ENST00000546803 MIIPQ5JXC2 388 aa17.9■□□□□ 0.46
CCDC38-203ENST00000546803 ACOT1Q86TX2 421 aa17.9■□□□□ 0.46
CCDC38-203ENST00000546803 ITIH5Q86UX2 942 aa17.9■□□□□ 0.46
CCDC38-203ENST00000546803 PPM1KQ8N3J5 372 aa17.9■□□□□ 0.46
CCDC38-203ENST00000546803 FEZF2Q8TBJ5 459 aa17.9■□□□□ 0.46
CCDC38-203ENST00000546803 ADAMTS19Q8TE59 1207 aa17.9■□□□□ 0.46
CCDC38-203ENST00000546803 FAM81BQ96LP2 452 aa17.9■□□□□ 0.46
CCDC38-203ENST00000546803 CEP295NLQ96MC4 621 aa17.9■□□□□ 0.46
CCDC38-203ENST00000546803 ELOVL4Q9GZR5 314 aa17.9■□□□□ 0.46
CCDC38-203ENST00000546803 CEP72Q9P209 647 aa17.9■□□□□ 0.46
CCDC38-203ENST00000546803 DNMT3BQ9UBC3 853 aaKnown RBP17.9■□□□□ 0.46
CCDC38-203ENST00000546803 NR2E1Q9Y466 385 aa17.9■□□□□ 0.46
CCDC38-203ENST00000546803 ATP8B3O60423 1300 aa17.9■□□□□ 0.46
CCDC38-203ENST00000546803 BECN2A8MW95 431 aa17.89■□□□□ 0.45
CCDC38-203ENST00000546803 RHOP08100 348 aa17.89■□□□□ 0.45
CCDC38-203ENST00000546803 ZNF18P17022 549 aa17.89■□□□□ 0.45
CCDC38-203ENST00000546803 CDK11BP21127 795 aaKnown RBP17.89■□□□□ 0.45
CCDC38-203ENST00000546803 ZP2Q05996 745 aa17.89■□□□□ 0.45
CCDC38-203ENST00000546803 KRT31Q15323 416 aa17.89■□□□□ 0.45
CCDC38-203ENST00000546803 PABPC1LQ4VXU2 614 aaKnown RBP17.89■□□□□ 0.45
CCDC38-203ENST00000546803 ENOSF1Q7L5Y1 443 aa17.89■□□□□ 0.45
CCDC38-203ENST00000546803 OTOP3Q7RTS5 596 aa17.89■□□□□ 0.45
CCDC38-203ENST00000546803 WHAMMQ8TF30 809 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms