RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 FAM167AQ96KS9 214 aa16.46■□□□□ 0.23
SCAP-215ENST00000545718 CCDC134Q9H6E4 229 aa16.46■□□□□ 0.23
SCAP-215ENST00000545718 MINDY3Q9H8M7 445 aa16.46■□□□□ 0.23
SCAP-215ENST00000545718 METTL5Q9NRN9 209 aaKnown RBP16.46■□□□□ 0.23
SCAP-215ENST00000545718 BAIAP2L1Q9UHR4 511 aa16.46■□□□□ 0.23
SCAP-215ENST00000545718 LSM8O95777 96 aaKnown RBP16.45■□□□□ 0.22
SCAP-215ENST00000545718 CD48P09326 243 aa16.45■□□□□ 0.22
SCAP-215ENST00000545718 CDKN2BP42772 138 aa16.45■□□□□ 0.22
SCAP-215ENST00000545718 ASPAP45381 313 aa16.45■□□□□ 0.22
SCAP-215ENST00000545718 VCPP55072 806 aaKnown RBP16.45■□□□□ 0.22
SCAP-215ENST00000545718 OTUD4Q01804 1114 aaKnown RBP16.45■□□□□ 0.22
SCAP-215ENST00000545718 LACTB2Q53H82 288 aaPredicted RBP16.45■□□□□ 0.22
SCAP-215ENST00000545718 GJC2Q5T442 439 aaPredicted RBP16.45■□□□□ 0.22
SCAP-215ENST00000545718 PARP9Q8IXQ6 854 aa16.45■□□□□ 0.22
SCAP-215ENST00000545718 CLMNQ96JQ2 1002 aa16.45■□□□□ 0.22
SCAP-215ENST00000545718 GPR20Q99678 358 aa16.45■□□□□ 0.22
SCAP-215ENST00000545718 RPF1Q9H9Y2 349 aaKnown RBP16.45■□□□□ 0.22
SCAP-215ENST00000545718 ITGB3P05106 788 aa16.45■□□□□ 0.22
SCAP-215ENST00000545718 NFICP08651 508 aa16.45■□□□□ 0.22
SCAP-215ENST00000545718 POLR2BP30876 1174 aaKnown RBP16.45■□□□□ 0.22
SCAP-215ENST00000545718 NRLP54845 237 aa16.45■□□□□ 0.22
SCAP-215ENST00000545718 SPATA21Q7Z572 469 aa16.45■□□□□ 0.22
SCAP-215ENST00000545718 CKAP2Q8WWK9 683 aa16.45■□□□□ 0.22
SCAP-215ENST00000545718 P3H4Q92791 437 aa16.45■□□□□ 0.22
SCAP-215ENST00000545718 SGSM3Q96HU1 749 aa16.45■□□□□ 0.22
SCAP-215ENST00000545718 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.45■□□□□ 0.22
SCAP-215ENST00000545718 HMGXB4Q9UGU5 601 aa16.45■□□□□ 0.22
SCAP-215ENST00000545718 CYTH4Q9UIA0 394 aa16.45■□□□□ 0.22
SCAP-215ENST00000545718 IL1R2P27930 398 aa16.44■□□□□ 0.22
SCAP-215ENST00000545718 MCL1Q07820 350 aa16.44■□□□□ 0.22
SCAP-215ENST00000545718 E2F5Q15329 346 aa16.44■□□□□ 0.22
SCAP-215ENST00000545718 SNCBQ16143 134 aa16.44■□□□□ 0.22
SCAP-215ENST00000545718 PKN2Q16513 984 aaKnown RBP16.44■□□□□ 0.22
SCAP-215ENST00000545718 RSAD2Q8WXG1 361 aa16.44■□□□□ 0.22
SCAP-215ENST00000545718 CPXM1Q96SM3 734 aa16.44■□□□□ 0.22
SCAP-215ENST00000545718 XYLT2Q9H1B5 865 aa16.44■□□□□ 0.22
SCAP-215ENST00000545718 ASCC2Q9H1I8 757 aaPredicted RBP16.44■□□□□ 0.22
SCAP-215ENST00000545718 SMYD3Q9H7B4 428 aa16.44■□□□□ 0.22
SCAP-215ENST00000545718 SSC5DA1L4H1 1573 aa16.44■□□□□ 0.22
SCAP-215ENST00000545718 TGFB3P10600 412 aa16.44■□□□□ 0.22
SCAP-215ENST00000545718 GDF10P55107 478 aa16.44■□□□□ 0.22
SCAP-215ENST00000545718 TAF5Q15542 800 aa16.44■□□□□ 0.22
SCAP-215ENST00000545718 CENPUQ71F23 418 aa16.44■□□□□ 0.22
SCAP-215ENST00000545718 RFX6Q8HWS3 928 aa16.44■□□□□ 0.22
SCAP-215ENST00000545718 UBR7Q8N806 425 aa16.44■□□□□ 0.22
SCAP-215ENST00000545718 KCTD6Q8NC69 237 aa16.44■□□□□ 0.22
SCAP-215ENST00000545718 CCHCR1Q8TD31 782 aa16.44■□□□□ 0.22
SCAP-215ENST00000545718 SPOCK2Q92563 424 aa16.44■□□□□ 0.22
SCAP-215ENST00000545718 PDGFCQ9NRA1 345 aa16.44■□□□□ 0.22
SCAP-215ENST00000545718 POLR2AP24928 1970 aaKnown RBP16.44■□□□□ 0.22
SCAP-215ENST00000545718 LRCH4O75427 683 aa16.44■□□□□ 0.22
SCAP-215ENST00000545718 TXNP10599 105 aaKnown RBP16.44■□□□□ 0.22
SCAP-215ENST00000545718 EIF4BP23588 611 aaKnown RBP16.44■□□□□ 0.22
SCAP-215ENST00000545718 DNAJC3Q13217 504 aa16.44■□□□□ 0.22
SCAP-215ENST00000545718 HADHQ16836 314 aaKnown RBP16.44■□□□□ 0.22
SCAP-215ENST00000545718 CDO1Q16878 200 aa16.44■□□□□ 0.22
SCAP-215ENST00000545718 SH3D19Q5HYK7 790 aa16.44■□□□□ 0.22
SCAP-215ENST00000545718 KIF2BQ8N4N8 673 aa16.44■□□□□ 0.22
SCAP-215ENST00000545718 NLGN2Q8NFZ4 835 aa16.44■□□□□ 0.22
SCAP-215ENST00000545718 UBA3Q8TBC4 463 aa16.44■□□□□ 0.22
SCAP-215ENST00000545718 TWNKQ96RR1 684 aa16.44■□□□□ 0.22
SCAP-215ENST00000545718 PITPNM3Q9BZ71 974 aa16.44■□□□□ 0.22
SCAP-215ENST00000545718 CDT1Q9H211 546 aa16.44■□□□□ 0.22
SCAP-215ENST00000545718 TRABDQ9H4I3 376 aa16.44■□□□□ 0.22
SCAP-215ENST00000545718 TXNRD2Q9NNW7 524 aa16.44■□□□□ 0.22
SCAP-215ENST00000545718 DDX56Q9NY93 547 aaKnown RBP16.44■□□□□ 0.22
SCAP-215ENST00000545718 AGAP1Q9UPQ3 857 aa16.44■□□□□ 0.22
SCAP-215ENST00000545718 FAM47DPA6NHR8 397 aa16.43■□□□□ 0.22
SCAP-215ENST00000545718 GRAP2O75791 330 aa16.43■□□□□ 0.22
SCAP-215ENST00000545718 DDNO94850 711 aaPredicted RBP16.43■□□□□ 0.22
SCAP-215ENST00000545718 GHRP10912 638 aa16.43■□□□□ 0.22
SCAP-215ENST00000545718 CA4P22748 312 aa16.43■□□□□ 0.22
SCAP-215ENST00000545718 EDNRBP24530 442 aa16.43■□□□□ 0.22
SCAP-215ENST00000545718 CTCFP49711 727 aaPredicted RBP16.43■□□□□ 0.22
SCAP-215ENST00000545718 YWHAEP62258 255 aaKnown RBP16.43■□□□□ 0.22
SCAP-215ENST00000545718 KCTD2Q14681 263 aa16.43■□□□□ 0.22
SCAP-215ENST00000545718 SURF1Q15526 300 aa16.43■□□□□ 0.22
SCAP-215ENST00000545718 NOL9Q5SY16 702 aaKnown RBP16.43■□□□□ 0.22
SCAP-215ENST00000545718 KIAA0319LQ8IZA0 1049 aa16.43■□□□□ 0.22
SCAP-215ENST00000545718 TBC1D31Q96DN5 1066 aa16.43■□□□□ 0.22
SCAP-215ENST00000545718 CPB2Q96IY4 423 aa16.43■□□□□ 0.22
SCAP-215ENST00000545718 C2orf40Q9H1Z8 148 aa16.43■□□□□ 0.22
SCAP-215ENST00000545718 ZBTB42B2RXF5 422 aa16.43■□□□□ 0.22
SCAP-215ENST00000545718 M0QYV0 167 aa16.43■□□□□ 0.22
SCAP-215ENST00000545718 ACKR2O00590 384 aa16.43■□□□□ 0.22
SCAP-215ENST00000545718 SSTR1P30872 391 aa16.43■□□□□ 0.22
SCAP-215ENST00000545718 BASP1P80723 227 aaKnown RBP16.43■□□□□ 0.22
SCAP-215ENST00000545718 IL9RQ01113 521 aa16.43■□□□□ 0.22
SCAP-215ENST00000545718 HIF1AQ16665 826 aa16.43■□□□□ 0.22
SCAP-215ENST00000545718 Q3C1V9 767 aa16.43■□□□□ 0.22
SCAP-215ENST00000545718 SULF1Q8IWU6 871 aa16.43■□□□□ 0.22
SCAP-215ENST00000545718 HEXIM2Q96MH2 286 aaKnown RBP16.43■□□□□ 0.22
SCAP-215ENST00000545718 PNMA3Q9UL41 463 aa16.43■□□□□ 0.22
SCAP-215ENST00000545718 STRIP2Q9ULQ0 834 aa16.43■□□□□ 0.22
SCAP-215ENST00000545718 GINS2Q9Y248 185 aa16.43■□□□□ 0.22
SCAP-215ENST00000545718 RGPD3A6NKT7 1758 aaPredicted RBP16.42■□□□□ 0.22
SCAP-215ENST00000545718 RGPD4Q7Z3J3 1758 aa16.42■□□□□ 0.22
SCAP-215ENST00000545718 TCRBV5S1A1TA0A578 114 aa16.42■□□□□ 0.22
SCAP-215ENST00000545718 IQCF3P0C7M6 154 aa16.42■□□□□ 0.22
SCAP-215ENST00000545718 FOXN2P32314 431 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms