RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 CCDC78A2IDD5 438 aa4.41□□□□□ -1.7
SCFD1-207ENST00000544052 LEFTY2O00292 366 aa4.41□□□□□ -1.7
SCFD1-207ENST00000544052 ACKR2O00590 384 aa4.41□□□□□ -1.7
SCFD1-207ENST00000544052 LAMTOR5O43504 91 aa4.41□□□□□ -1.7
SCFD1-207ENST00000544052 TRIM13O60858 407 aa4.41□□□□□ -1.7
SCFD1-207ENST00000544052 WDHD1O75717 1129 aaPredicted RBP4.41□□□□□ -1.7
SCFD1-207ENST00000544052 TNFRSF6BO95407 300 aa4.41□□□□□ -1.7
SCFD1-207ENST00000544052 GABRB3P28472 473 aa4.41□□□□□ -1.7
SCFD1-207ENST00000544052 RAB30Q15771 203 aa4.41□□□□□ -1.7
SCFD1-207ENST00000544052 PLA1AQ53H76 456 aa4.41□□□□□ -1.7
SCFD1-207ENST00000544052 FAM160B1Q5W0V3 765 aa4.41□□□□□ -1.7
SCFD1-207ENST00000544052 TTLL10Q6ZVT0 673 aa4.41□□□□□ -1.7
SCFD1-207ENST00000544052 STYXQ8WUJ0 223 aa4.41□□□□□ -1.7
SCFD1-207ENST00000544052 DDX17Q92841 729 aaKnown RBP4.41□□□□□ -1.7
SCFD1-207ENST00000544052 SLC46A1Q96NT5 459 aa4.41□□□□□ -1.7
SCFD1-207ENST00000544052 RMDN3Q96TC7 470 aa4.41□□□□□ -1.7
SCFD1-207ENST00000544052 MAGEH1Q9H213 219 aa4.41□□□□□ -1.7
SCFD1-207ENST00000544052 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.41□□□□□ -1.7
SCFD1-207ENST00000544052 ATP11BQ9Y2G3 1177 aa4.41□□□□□ -1.7
SCFD1-207ENST00000544052 AATKQ6ZMQ8 1374 aa4.4□□□□□ -1.7
SCFD1-207ENST00000544052 GOLGA6L3A6NEY3 463 aa4.4□□□□□ -1.71
SCFD1-207ENST00000544052 POLRMTO00411 1230 aaKnown RBP4.4□□□□□ -1.71
SCFD1-207ENST00000544052 DCLK1O15075 740 aa4.4□□□□□ -1.71
SCFD1-207ENST00000544052 MFAP3LO75121 409 aa4.4□□□□□ -1.71
SCFD1-207ENST00000544052 INHBBP09529 407 aa4.4□□□□□ -1.71
SCFD1-207ENST00000544052 CKBP12277 381 aa4.4□□□□□ -1.71
SCFD1-207ENST00000544052 RPS19P39019 145 aaKnown RBP4.4□□□□□ -1.71
SCFD1-207ENST00000544052 EPHB4P54760 987 aa4.4□□□□□ -1.71
SCFD1-207ENST00000544052 SPARCL1Q14515 664 aa4.4□□□□□ -1.71
SCFD1-207ENST00000544052 SLC29A2Q14542 456 aa4.4□□□□□ -1.71
SCFD1-207ENST00000544052 C1QL3Q5VWW1 255 aa4.4□□□□□ -1.71
SCFD1-207ENST00000544052 METRNLQ641Q3 311 aa4.4□□□□□ -1.71
SCFD1-207ENST00000544052 TCTN3Q6NUS6 607 aa4.4□□□□□ -1.71
SCFD1-207ENST00000544052 DRICH1Q6PGQ1 229 aaPredicted RBP4.4□□□□□ -1.71
SCFD1-207ENST00000544052 PLEKHH3Q7Z736 793 aa4.4□□□□□ -1.71
SCFD1-207ENST00000544052 FUKQ8N0W3 1084 aa4.4□□□□□ -1.71
SCFD1-207ENST00000544052 SDR16C5Q8N3Y7 309 aa4.4□□□□□ -1.71
SCFD1-207ENST00000544052 MDGA1Q8NFP4 955 aa4.4□□□□□ -1.71
SCFD1-207ENST00000544052 CNPPD1Q9BV87 410 aa4.4□□□□□ -1.71
SCFD1-207ENST00000544052 MAGEB5Q9BZ81 275 aa4.4□□□□□ -1.71
SCFD1-207ENST00000544052 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.4□□□□□ -1.713e-9■■□□□ 13.6
SCFD1-207ENST00000544052 SMOC2Q9H3U7 446 aa4.4□□□□□ -1.71
SCFD1-207ENST00000544052 PRDM16Q9HAZ2 1276 aa4.4□□□□□ -1.71
SCFD1-207ENST00000544052 ITM2CQ9NQX7 267 aa4.4□□□□□ -1.71
SCFD1-207ENST00000544052 USP40Q9NVE5 1235 aa4.4□□□□□ -1.71
SCFD1-207ENST00000544052 DACT1Q9NYF0 836 aa4.4□□□□□ -1.71
SCFD1-207ENST00000544052 C9orf78Q9NZ63 289 aaPredicted RBP4.4□□□□□ -1.71
SCFD1-207ENST00000544052 HESX1Q9UBX0 185 aa4.4□□□□□ -1.71
SCFD1-207ENST00000544052 SCAF8Q9UPN6 1271 aaKnown RBP4.4□□□□□ -1.71
SCFD1-207ENST00000544052 M0R3H8 397 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 HNRNPDLO14979 420 aaKnown RBP4.39□□□□□ -1.71
SCFD1-207ENST00000544052 PIP5K1BO14986 540 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 FOXS1O43638 330 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 CHEK2O96017 543 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 TCF15Q12870 199 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 KCNAB1Q14722 419 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 POSTNQ15063 836 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 SLFN13Q68D06 897 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 SPTY2D1Q68D10 685 aaPredicted RBP4.39□□□□□ -1.71
SCFD1-207ENST00000544052 FCRL6Q6DN72 434 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 LIN54Q6MZP7 749 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 CRTC1Q6UUV9 634 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.39□□□□□ -1.71
SCFD1-207ENST00000544052 YAF2Q8IY57 180 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 CYP2W1Q8TAV3 490 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 NUP133Q8WUM0 1156 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 TRIB1Q96RU8 372 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 MESP1Q9BRJ9 268 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 ISCA1Q9BUE6 129 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 MAF1Q9H063 256 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 SIK2Q9H0K1 926 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 ETAA1Q9NY74 926 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 RGL1Q9NZL6 768 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 PNMA2Q9UL42 364 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.39□□□□□ -1.71
SCFD1-207ENST00000544052 NCANO14594 1321 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 DIP2BQ9P265 1576 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 PRRG2O14669 202 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 ZNF536O15090 1300 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 IPO13O94829 963 aaKnown RBP4.39□□□□□ -1.71
SCFD1-207ENST00000544052 CNR2P34972 360 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 LILRA4P59901 499 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 NHLH2Q02577 135 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 TAF5Q15542 800 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 ZIK1Q3SY52 487 aaPredicted RBP4.39□□□□□ -1.71
SCFD1-207ENST00000544052 FAM102AQ5T9C2 384 aaPredicted RBP4.39□□□□□ -1.71
SCFD1-207ENST00000544052 PPRC1Q5VV67 1664 aaKnown RBP4.39□□□□□ -1.71
SCFD1-207ENST00000544052 TSHZ3Q63HK5 1081 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 RAP1GAP2Q684P5 730 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 JMJD6Q6NYC1 403 aaPredicted RBP4.39□□□□□ -1.71
SCFD1-207ENST00000544052 KIAA0408Q6ZU52 694 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 D2HGDHQ8N465 521 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 CCDC150Q8NCX0 1101 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 PSD4Q8NDX1 1056 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 FEZF2Q8TBJ5 459 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 ZNF483Q8TF39 744 aaPredicted RBP4.39□□□□□ -1.71
SCFD1-207ENST00000544052 PRG4Q92954 1404 aaPredicted RBP4.39□□□□□ -1.71
SCFD1-207ENST00000544052 TRIM63Q969Q1 353 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 CASS4Q9NQ75 786 aa4.39□□□□□ -1.71
SCFD1-207ENST00000544052 HEYLQ9NQ87 328 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms