RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 CORO7P57737 925 aa16.06■□□□□ 0.16
CHD4-210ENST00000544040 RBP5P82980 135 aa16.06■□□□□ 0.16
CHD4-210ENST00000544040 CASKIN2Q8WXE0 1202 aa16.06■□□□□ 0.16
CHD4-210ENST00000544040 BHMTQ93088 406 aa16.06■□□□□ 0.16
CHD4-210ENST00000544040 WWOXQ9NZC7 414 aa16.06■□□□□ 0.16
CHD4-210ENST00000544040 GCC2Q8IWJ2 1684 aa16.06■□□□□ 0.16
CHD4-210ENST00000544040 ALDH1A1P00352 501 aa16.06■□□□□ 0.16
CHD4-210ENST00000544040 ATP6V1B2P21281 511 aa16.06■□□□□ 0.16
CHD4-210ENST00000544040 RGS4P49798 205 aa16.06■□□□□ 0.16
CHD4-210ENST00000544040 DMPKQ09013 629 aa16.06■□□□□ 0.16
CHD4-210ENST00000544040 COG2Q14746 738 aa16.06■□□□□ 0.16
CHD4-210ENST00000544040 OASLQ15646 514 aaKnown RBP16.06■□□□□ 0.16
CHD4-210ENST00000544040 PLA2G4FQ68DD2 849 aa16.06■□□□□ 0.16
CHD4-210ENST00000544040 PAPOLBQ9NRJ5 636 aaKnown RBP16.06■□□□□ 0.16
CHD4-210ENST00000544040 RUVBL2Q9Y230 463 aaKnown RBP16.06■□□□□ 0.16
CHD4-210ENST00000544040 HSPA13P48723 471 aa16.06■□□□□ 0.16
CHD4-210ENST00000544040 EFNA5P52803 228 aa16.06■□□□□ 0.16
CHD4-210ENST00000544040 GPAT2Q6NUI2 795 aa16.06■□□□□ 0.16
CHD4-210ENST00000544040 TMC5Q6UXY8 1006 aa16.06■□□□□ 0.16
CHD4-210ENST00000544040 PPIL6Q8IXY8 311 aa16.06■□□□□ 0.16
CHD4-210ENST00000544040 TC2NQ8N9U0 490 aa16.06■□□□□ 0.16
CHD4-210ENST00000544040 CELF1Q92879 486 aaKnown RBP16.06■□□□□ 0.16
CHD4-210ENST00000544040 TRPC5OSA6NMA1 111 aa16.06■□□□□ 0.16
CHD4-210ENST00000544040 CYP51A1Q16850 503 aa16.06■□□□□ 0.16
CHD4-210ENST00000544040 ROGDIQ9GZN7 287 aa16.06■□□□□ 0.16
CHD4-210ENST00000544040 ERBB3P21860 1342 aa16.06■□□□□ 0.16
CHD4-210ENST00000544040 KLHL18O94889 574 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 UPP2O95045 317 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 IGKV5-2P06315 115 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 GPD1P21695 349 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 VMP1Q96GC9 406 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 MYMKA6NI61 221 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 GLRBP48167 497 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 KRT78Q8N1N4 520 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 KRT35Q92764 455 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 PNKPQ96T60 521 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 ALG6Q9Y672 507 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 HEATR9A2RTY3 570 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 TXNP10599 105 aaKnown RBP16.05■□□□□ 0.16
CHD4-210ENST00000544040 PTGER2P43116 358 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 ANKRD7Q92527 254 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 KAT2BQ92831 832 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 OMA1Q96E52 524 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 SPATA16Q9BXB7 569 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 CNGB3Q9NQW8 809 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 INTS13Q9NVM9 706 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 ITIH6Q6UXX5 1313 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 STK4Q13043 487 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 PDK1Q15118 436 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 NFIL3Q16649 462 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 SGSM1Q2NKQ1 1148 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 SETD3Q86TU7 594 aaPredicted RBP16.05■□□□□ 0.16
CHD4-210ENST00000544040 VPS37AQ8NEZ2 397 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 SCFD2Q8WU76 684 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 WDR35Q9P2L0 1181 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 LSM7Q9UK45 103 aaKnown RBP16.05■□□□□ 0.16
CHD4-210ENST00000544040 RNF112Q9ULX5 631 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 AP4S1Q9Y587 144 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 PDZK1P1A8MUH7 402 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 SUPT7LO94864 414 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 ATP1A4Q13733 1029 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 KYAT1Q16773 422 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.05■□□□□ 0.162e-6■■■■■ 53.5
CHD4-210ENST00000544040 MKL2Q9ULH7 1088 aa16.05■□□□□ 0.16
CHD4-210ENST00000544040 CLEC16AQ2KHT3 1053 aa16.04■□□□□ 0.16
CHD4-210ENST00000544040 MFSD4BQ5TF39 518 aa16.04■□□□□ 0.16
CHD4-210ENST00000544040 ZNF512Q96ME7 567 aaPredicted RBP16.04■□□□□ 0.16
CHD4-210ENST00000544040 SPRTNQ9H040 489 aaPredicted RBP16.04■□□□□ 0.16
CHD4-210ENST00000544040 CYP4F12Q9HCS2 524 aa16.04■□□□□ 0.16
CHD4-210ENST00000544040 SPATA2Q9UM82 520 aa16.04■□□□□ 0.16
CHD4-210ENST00000544040 CTTNBP2Q8WZ74 1663 aa16.04■□□□□ 0.16
CHD4-210ENST00000544040 TMEM2Q9UHN6 1383 aa16.04■□□□□ 0.16
CHD4-210ENST00000544040 FEN1P39748 380 aaKnown RBP16.04■□□□□ 0.16
CHD4-210ENST00000544040 SMARCAD1Q9H4L7 1026 aa16.04■□□□□ 0.16
CHD4-210ENST00000544040 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.04■□□□□ 0.16
CHD4-210ENST00000544040 AATKQ6ZMQ8 1374 aa16.04■□□□□ 0.16
CHD4-210ENST00000544040 SSU72P8A0A1W2PR75 194 aa16.04■□□□□ 0.16
CHD4-210ENST00000544040 PMPCBO75439 489 aa16.04■□□□□ 0.16
CHD4-210ENST00000544040 ALOX15P16050 662 aaPredicted RBP16.04■□□□□ 0.16
CHD4-210ENST00000544040 PTK6Q13882 451 aa16.04■□□□□ 0.16
CHD4-210ENST00000544040 SHROOM1Q2M3G4 852 aaPredicted RBP16.04■□□□□ 0.16
CHD4-210ENST00000544040 MGAT5BQ3V5L5 792 aa16.04■□□□□ 0.16
CHD4-210ENST00000544040 ARMCX4Q5H9R4 360 aa16.04■□□□□ 0.16
CHD4-210ENST00000544040 PSMD14O00487 310 aa16.04■□□□□ 0.16
CHD4-210ENST00000544040 GYPCP04921 128 aa16.04■□□□□ 0.16
CHD4-210ENST00000544040 NUP62P37198 522 aaPredicted RBP16.04■□□□□ 0.16
CHD4-210ENST00000544040 STOX1Q6ZVD7 989 aa16.04■□□□□ 0.16
CHD4-210ENST00000544040 NLRP9Q7RTR0 991 aa16.04■□□□□ 0.16
CHD4-210ENST00000544040 SCUBE1Q8IWY4 988 aa16.04■□□□□ 0.16
CHD4-210ENST00000544040 ZNF614Q8N883 585 aa16.04■□□□□ 0.16
CHD4-210ENST00000544040 PPP1R14AQ96A00 147 aa16.04■□□□□ 0.16
CHD4-210ENST00000544040 PEG3Q9GZU2 1588 aa16.04■□□□□ 0.16
CHD4-210ENST00000544040 FAM25AB3EWG3 89 aa16.04■□□□□ 0.16
CHD4-210ENST00000544040 FAM25CB3EWG5 89 aa16.04■□□□□ 0.16
CHD4-210ENST00000544040 FAM25GB3EWG6 89 aa16.04■□□□□ 0.16
CHD4-210ENST00000544040 CPSF4O95639 269 aaKnown RBP16.04■□□□□ 0.16
CHD4-210ENST00000544040 HLA-DRAP01903 254 aa16.04■□□□□ 0.16
CHD4-210ENST00000544040 PDHBP11177 359 aa16.04■□□□□ 0.16
CHD4-210ENST00000544040 FLT3P36888 993 aa16.04■□□□□ 0.16
CHD4-210ENST00000544040 ATP12AP54707 1039 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms